Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20042
(613 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V6B9 Cluster: Probable nucleoporin Nup54; n=5; Dipter... 76 8e-13
UniRef50_UPI000051A83E Cluster: PREDICTED: similar to CG8831-PA;... 66 8e-10
UniRef50_Q7Z3B4 Cluster: Nucleoporin p54; n=37; Euteleostomi|Rep... 65 1e-09
UniRef50_Q4SQB0 Cluster: Chromosome 4 SCAF14533, whole genome sh... 65 1e-09
UniRef50_A7S346 Cluster: Predicted protein; n=2; Nematostella ve... 61 2e-08
UniRef50_UPI0000D557BD Cluster: PREDICTED: similar to CG8831-PA;... 61 2e-08
UniRef50_UPI0000E47599 Cluster: PREDICTED: similar to nucleopori... 60 5e-08
UniRef50_Q30X57 Cluster: Phosphomannomutase; n=2; Desulfovibrion... 35 1.3
UniRef50_Q3JR61 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q2VZI4 Cluster: Transcriptional regulator; n=2; Magneto... 34 2.3
UniRef50_Q95JS6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_A2Q9P9 Cluster: Remark: N-terminally truncated ORF due ... 34 2.3
UniRef50_A0WD15 Cluster: Radical SAM; n=1; Geobacter lovleyi SZ|... 34 3.1
UniRef50_Q4S6G8 Cluster: Chromosome 10 SCAF14728, whole genome s... 33 4.0
UniRef50_A0L6R8 Cluster: Outer membrane efflux protein precursor... 33 5.3
UniRef50_UPI000155483C Cluster: PREDICTED: similar to keratin as... 32 9.3
UniRef50_Q28VU1 Cluster: Pyridoxamine 5'-phosphate oxidase-relat... 32 9.3
UniRef50_Q1GCY8 Cluster: Sensor protein; n=1; Silicibacter sp. T... 32 9.3
UniRef50_A6G0J8 Cluster: Phospholipase D/Transphosphatidylase; n... 32 9.3
>UniRef50_Q9V6B9 Cluster: Probable nucleoporin Nup54; n=5;
Diptera|Rep: Probable nucleoporin Nup54 - Drosophila
melanogaster (Fruit fly)
Length = 610
Score = 75.8 bits (178), Expect = 8e-13
Identities = 39/91 (42%), Positives = 55/91 (60%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
EA R +L + + ++AP GRL+ELL +R+QR+ A Y LD A++++K FL
Sbjct: 517 EALRTKLQNMLAVVSAPTQFKGRLSELLSQMRMQRNQFAANGGAEYALDKEAEDEMKTFL 576
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKGCRNL 236
T+QQ+ M L DT KDL AL+ I KG L
Sbjct: 577 TMQQRAMEVLSDTVNKDLRALDVIIKGLPEL 607
>UniRef50_UPI000051A83E Cluster: PREDICTED: similar to CG8831-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG8831-PA
- Apis mellifera
Length = 621
Score = 65.7 bits (153), Expect = 8e-10
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
E R + SQ++AP GR++E+L +R++ ERY +DP AQ+D+K +L
Sbjct: 525 EVLTRRFEAMHSQVSAPTQFKGRISEMLSQLRMRNHIDTHN-QERYAMDPIAQDDIKTYL 583
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKG 248
T++Q GMA L+ T DL +L I G
Sbjct: 584 TMEQHGMAQLIATINSDLESLKIIKDG 610
>UniRef50_Q7Z3B4 Cluster: Nucleoporin p54; n=37; Euteleostomi|Rep:
Nucleoporin p54 - Homo sapiens (Human)
Length = 507
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
E R +L + +L AP GRLNEL+ +R+Q A + ERY +D ++KQ L
Sbjct: 408 EQLRVQLDTIQGELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHL 467
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKGCRNLFELR 224
QQ+G++HL+ + DL + + G +R
Sbjct: 468 KQQQEGLSHLISIIKDDLEDIKLVEHGLNETIHIR 502
>UniRef50_Q4SQB0 Cluster: Chromosome 4 SCAF14533, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14533, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 518
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
E R +L + S+L AP GRLNEL+ +R+Q A + ERY +D ++KQ L
Sbjct: 419 EHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHL 478
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKG 248
QQ+G++HL+ + DL + I G
Sbjct: 479 KQQQEGISHLISVIKDDLEDIKLIEHG 505
>UniRef50_A7S346 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 567
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/87 (34%), Positives = 49/87 (56%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
E R + + +L AP RLNELL +RLQ+S + + +Y +DP ++++KQ L
Sbjct: 473 EQLRVHMESIQVELNAPLQFKARLNELLSQIRLQQSQARERSLGKYVMDPQLEDELKQHL 532
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKG 248
QQ G+ H++ + D+ L TI +G
Sbjct: 533 EQQQVGLMHIIGIIKDDIEDLKTIEQG 559
>UniRef50_UPI0000D557BD Cluster: PREDICTED: similar to CG8831-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8831-PA - Tribolium castaneum
Length = 642
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/96 (33%), Positives = 53/96 (55%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
E + +L + + L P G+LNEL+ V+L + S RY+L +Q ++K FL
Sbjct: 545 EYLKGKLETMYAHLNVPTQFKGQLNELISTVKLMENTSRP-PQPRYKLVEESQAELKDFL 603
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKGCRNLFELRT 221
LQQ G++ L+D + D+ +LN + G R L + +T
Sbjct: 604 QLQQNGISKLVDIVKDDMRSLNIMIDGMRQLMQNKT 639
>UniRef50_UPI0000E47599 Cluster: PREDICTED: similar to nucleoporin
p54; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to nucleoporin p54 - Strongylocentrotus
purpuratus
Length = 536
Score = 59.7 bits (138), Expect = 5e-08
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = -1
Query: 508 EATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFL 329
E R + L ++L AP RLNE+L +RLQ + E+Y +D Q +++Q L
Sbjct: 444 EHLRTQHEGLMAELNAPTQMKARLNEMLSQIRLQSHLPFSRSSEQYSIDSDLQYEIRQHL 503
Query: 328 TLQQKGMAHLLDTARKDLAALNTIAKG 248
QQ+G++HL+ ++DL L I +G
Sbjct: 504 KQQQEGISHLVGIIKEDLEDLKLIERG 530
>UniRef50_Q30X57 Cluster: Phosphomannomutase; n=2;
Desulfovibrionaceae|Rep: Phosphomannomutase -
Desulfovibrio desulfuricans (strain G20)
Length = 457
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +3
Query: 441 RPFESGGAANCEASSCSRARVASLRD*ELHQHDRRLLDARQSAGAYVAARAERRRGA 611
R FESG A C+ A+ RD L + R +LD AG V A RR GA
Sbjct: 136 RDFESGSGAGCDVDIIPDYIEAASRDITLRRPVRVVLDGGNGAGGLVCAELLRRIGA 192
>UniRef50_Q3JR61 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 583
Score = 34.3 bits (75), Expect = 2.3
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 306 AMPFCCRVKNCFTSSCAPGSN*YRSCAIPALALRCKRTAHSNSFKRPFESGGAANCEAS- 482
AMP T APG+ + A+PA A +RT H ++ +RPF +A A+
Sbjct: 450 AMPRVAARSRRATPHAAPGN----APAMPAHAFSARRTRHGDATRRPFRCALSARDRATG 505
Query: 483 SCSRARVASLR 515
+C R R A R
Sbjct: 506 TCPRGRPARAR 516
>UniRef50_Q2VZI4 Cluster: Transcriptional regulator; n=2;
Magnetospirillum|Rep: Transcriptional regulator -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 213
Score = 34.3 bits (75), Expect = 2.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 505 ATRARLHELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERY 371
ATR L A++LAA S ++ L ++ LQRSA A AHE Y
Sbjct: 84 ATREALEGAAARLAAEKASPEQIKALRESIGLQRSAVADSAHEAY 128
>UniRef50_Q95JS6 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 171
Score = 34.3 bits (75), Expect = 2.3
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 333 NCFTSSCAPGSN*YRSCAIPALALRCKRTAHSNSFKRPFESGGAANCEASSCSRARVAS 509
N TS +P SCA P+ RC+R A S++ KRP A ++ SR R S
Sbjct: 94 NTVTSPVSPTGASSVSCAQPSSLCRCRRPAPSSTTKRPPTGSCATERSPAATSRRRSGS 152
>UniRef50_A2Q9P9 Cluster: Remark: N-terminally truncated ORF due to
the end of contig; n=1; Aspergillus niger|Rep: Remark:
N-terminally truncated ORF due to the end of contig -
Aspergillus niger
Length = 317
Score = 34.3 bits (75), Expect = 2.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 587 RCDIRSCRLSRVKKPSVVLVQLLVPKRSDPSSTARTRFTISSASTFKWAFER 432
RC I S LS V+ LV LL+ K DP+S+ +T + WA ++
Sbjct: 51 RCKIGSVLLSAVEDDDPELVSLLINKDIDPNSSCKTGIGRGDCTVLTWAAKK 102
>UniRef50_A0WD15 Cluster: Radical SAM; n=1; Geobacter lovleyi
SZ|Rep: Radical SAM - Geobacter lovleyi SZ
Length = 374
Score = 33.9 bits (74), Expect = 3.1
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 472 QLAAPPLSNGRLNELLCAVR--LQRSASAGMAHERYQLDPGAQEDVKQFLTLQQKGMAHL 299
QLA PP RL+E+ R LQR AG+ +R DPG D LQQK + +
Sbjct: 287 QLACPP---DRLSEVQGHARSNLQRWQQAGLPVDRILTDPGLNHDQICLQNLQQKSIGSI 343
Query: 298 LDT 290
+ T
Sbjct: 344 ITT 346
>UniRef50_Q4S6G8 Cluster: Chromosome 10 SCAF14728, whole genome
shotgun sequence; n=4; Coelomata|Rep: Chromosome 10
SCAF14728, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1128
Score = 33.5 bits (73), Expect = 4.0
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +3
Query: 318 CCRVKNCFTSSCAPGSN*YRSCAIPALALRCKRTAHSNSFKRPFESGGAANCEASSCS 491
C + N F C G RSC ALALR A ++F P G + C+A++CS
Sbjct: 582 CVDLLNDFYCDCVDGWK-GRSCHSRALALRRSSLA-GDAFTDPLLLSGVSQCDATTCS 637
>UniRef50_A0L6R8 Cluster: Outer membrane efflux protein precursor;
n=1; Magnetococcus sp. MC-1|Rep: Outer membrane efflux
protein precursor - Magnetococcus sp. (strain MC-1)
Length = 746
Score = 33.1 bits (72), Expect = 5.3
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -1
Query: 442 RLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFLTLQQK--GMAHLLDTARKDLAA 269
RLN+L ++ SAS + R Q A E + + L++K GM H++ A+ LAA
Sbjct: 206 RLNQLDWRIKKALSASQQLEQRRLQSPVKALEYQRTLMELERKVAGMRHMVWNAKSQLAA 265
Query: 268 LNTIAKG 248
L + G
Sbjct: 266 LMNLKPG 272
>UniRef50_UPI000155483C Cluster: PREDICTED: similar to keratin
associated protein; n=8; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to keratin associated protein -
Ornithorhynchus anatinus
Length = 399
Score = 32.3 bits (70), Expect = 9.3
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +3
Query: 303 CAMPFCCRVKNCFTSSCAPGSN*YRSCAIPALALRCKRTAHSNSFKRPFESGGAANCEAS 482
C +P CC+ C T C P S C PA C S S S G C+AS
Sbjct: 29 CCVPVCCKPTCCPTPCCRPASRVALLCR-PACGAPCGTGCGSAS------SCGDGPCQAS 81
Query: 483 SCSRA 497
C A
Sbjct: 82 CCQPA 86
>UniRef50_Q28VU1 Cluster: Pyridoxamine 5'-phosphate oxidase-related
FMN-binding; n=2; Jannaschia sp. CCS1|Rep: Pyridoxamine
5'-phosphate oxidase-related FMN-binding - Jannaschia
sp. (strain CCS1)
Length = 174
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 274 QGPSSPCPIDAPCPSVAGSRTASRLLVHLGLIDIVHAPFPHWRYVANA 417
QGP P+ A P +R +RL+ HL ID++H PH R V A
Sbjct: 119 QGPVPGTPLPAE-PDATPNRF-TRLICHLSEIDVLHLTTPHQRAVYTA 164
>UniRef50_Q1GCY8 Cluster: Sensor protein; n=1; Silicibacter sp.
TM1040|Rep: Sensor protein - Silicibacter sp. (strain
TM1040)
Length = 1096
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 373 IVHAPFPHWRYVANALRTATRSNAHLKVEALLIVKRVRAVELGSLLF 513
++ PFP W VA A R A +N+ AL ++ V LG L F
Sbjct: 305 VLEPPFPAWTVVAEADRDAAFANSSQLRNALFLIGAVAVTGLGLLSF 351
>UniRef50_A6G0J8 Cluster: Phospholipase D/Transphosphatidylase; n=1;
Plesiocystis pacifica SIR-1|Rep: Phospholipase
D/Transphosphatidylase - Plesiocystis pacifica SIR-1
Length = 716
Score = 32.3 bits (70), Expect = 9.3
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 277 GPSSPCPIDAPCPSVA-GSRTASRLLVHLGLID 372
G + P APCP + GS A+R +VH GL+D
Sbjct: 490 GGAEPSEAPAPCPPLEPGSGCAARFVVHRGLVD 522
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,493,656
Number of Sequences: 1657284
Number of extensions: 10672332
Number of successful extensions: 33221
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 31931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33158
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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