Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0069
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q21IU7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q4YFU8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  

>UniRef50_Q21IU7 Cluster: Putative uncharacterized protein; n=1;
           Saccharophagus degradans 2-40|Rep: Putative
           uncharacterized protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 168

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 378 YSQLLKSCHCKRTVFFFFYYCFDEISIGTRFCDDRFYELM 259
           YS  LK C    TVFF  Y C+++++IG   C    Y L+
Sbjct: 34  YSSTLKKCGDGLTVFFGAYICYEDVAIGND-CTIEEYSLL 72


>UniRef50_Q4YFU8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 85

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -3

Query: 517 KFYFIKTKRKQWNNYDIKIYQNVFHLTLPATLISNSNRHIAKV 389
           K+YF     K W+N  + I   + +LT+ + ++ NSN HI+KV
Sbjct: 25  KWYFFFLPFKYWDN--VNIINVIINLTIFSIIMKNSNIHISKV 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,183,186
Number of Sequences: 1657284
Number of extensions: 11208934
Number of successful extensions: 22973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22961
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)