Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0051
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 128 1e-28
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 87 4e-16
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 87 4e-16
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 84 3e-15
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 83 9e-15
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 83 9e-15
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 73 5e-12
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 67 3e-10
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 67 5e-10
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 66 1e-09
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 64 3e-09
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 64 4e-09
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 63 7e-09
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 60 4e-08
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 50 4e-05
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 49 1e-04
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 48 2e-04
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 47 5e-04
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 45 0.002
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 42 0.020
UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1; G... 40 0.060
UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 fami... 39 0.14
UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog... 36 0.73
UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, who... 34 3.0
UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY0007... 33 5.2
UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|... 33 6.8
UniRef50_Q4P436 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q6VZB4 Cluster: CNPV233 ankyrin repeat protein; n=1; Ca... 33 9.0
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 128 bits (310), Expect = 1e-28
Identities = 58/66 (87%), Positives = 64/66 (96%)
Frame = +1
Query: 37 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 216
MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60
Query: 217 KKEFAC 234
KKEFAC
Sbjct: 61 KKEFAC 66
Score = 79.8 bits (188), Expect = 6e-14
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +2
Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
PEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 74 PEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 2/67 (2%)
Frame = +1
Query: 40 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 213
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 214 CKKEFAC 234
KK+FAC
Sbjct: 63 FKKKFAC 69
Score = 66.5 bits (155), Expect = 6e-10
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +2
Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
PEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 77 PEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Frame = +1
Query: 40 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 213
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 214 CKKEFAC 234
KK+FAC
Sbjct: 63 FKKKFAC 69
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2
Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
PEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 77 PEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = +1
Query: 37 MSIQNLNTFDPFADAIK--SSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 210
MSI+NL T+DPFA+A + S + +H+RIQQRNGRKTLTTVQG+ ++D KKI++
Sbjct: 1 MSIENLKTYDPFAEADEEDSGQTKQTQEYIHIRIQQRNGRKTLTTVQGIPKKFDAKKILK 60
Query: 211 ACKKEFAC 234
KKEFAC
Sbjct: 61 VVKKEFAC 68
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +2
Query: 263 GEVLQLQGDQRENICQWLTK--SGL-VKPEQLKVHGF 364
G+V+QLQGDQR I +LT GL + + +KVHGF
Sbjct: 81 GDVIQLQGDQRAKIKDFLTNKDEGLGLDAKTIKVHGF 117
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 82.6 bits (195), Expect = 9e-15
Identities = 41/80 (51%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 VSLKQRDPTFNRMSIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQG 174
VS ++++ ++ + +IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG
Sbjct: 167 VSTEEKE-SYCKFAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQG 225
Query: 175 LSSEYDLKKIVRACKKEFAC 234
++ +YD KK+V+A K FAC
Sbjct: 226 IADDYDKKKLVKAF-KNFAC 244
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
PEYGEV+Q QGDQ NICQ+L + GL K +QLKVH F
Sbjct: 252 PEYGEVIQPQGDQCNNICQFLVELGLAKDDQLKVHVF 288
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = +1
Query: 43 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKK 222
I+NL FDPFA+A + D +H+RIQQRNGRKTLTTVQGL ++D KKI++ KK
Sbjct: 60 IENLKVFDPFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGLPKKFDQKKILKVIKK 119
Query: 223 EFAC 234
+FAC
Sbjct: 120 KFAC 123
Score = 39.9 bits (89), Expect = 0.060
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 2/36 (5%)
Frame = +2
Query: 263 GEVLQLQGDQRENICQWLT-KSGL-VKPEQLKVHGF 364
G+V+QLQGDQR+++ ++LT K GL ++ + +KVHGF
Sbjct: 134 GDVIQLQGDQRKDVQEFLTGKDGLELEAKTIKVHGF 169
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/66 (51%), Positives = 41/66 (62%)
Frame = +1
Query: 37 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 216
+ +Q FDPFADA VH+R+QQRNGRK+LTTVQGL EY KI++
Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDL 63
Query: 217 KKEFAC 234
KKEF C
Sbjct: 64 KKEFCC 69
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +2
Query: 257 EYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
E G+V+QLQGDQR+N+ +L ++GLVK + +K+HGF
Sbjct: 78 ELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Frame = +1
Query: 43 IQNLN-TFDPFADA-----IKSSEDDV--QDGLVHVRIQQRNGRKTLTTVQGLSSEYDLK 198
++NL FDPFA S E V ++ +H+R+QQRNGRKTLTTVQG+ S+Y+
Sbjct: 26 VENLGPAFDPFAPVNDLNDTPSIEKAVGSKNDKIHIRLQQRNGRKTLTTVQGIPSKYNHS 85
Query: 199 KIVRACKKEFAC 234
KI++A KKEFAC
Sbjct: 86 KILKAMKKEFAC 97
Score = 35.9 bits (79), Expect = 0.97
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +2
Query: 260 YGEVLQLQGDQRENICQWLTKSGLVKPEQLK----VHGF 364
+G+VLQLQGDQR Q+L SG+V ++ K VHG+
Sbjct: 121 HGDVLQLQGDQRVAAKQFLIDSGIVAQKEAKDLIVVHGY 159
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +1
Query: 67 PFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
PF S G VH+R QQRNG+K+LTTVQGLS+E+DLK++++A KK F+C
Sbjct: 13 PFVVDALSEVGKSSSGYVHIRNQQRNGKKSLTTVQGLSAEFDLKRLLKAFKKNFSC 68
Score = 44.8 bits (101), Expect = 0.002
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +2
Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 361
PE+G +LQ+QGD R N+ ++L +V +++K+HG
Sbjct: 76 PEHGPILQIQGDHRHNVARFLVGENIVNSDEIKIHG 111
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +1
Query: 97 DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
D VQ +H+R+QQRNGRK+LTTVQGL+ + +LK +V+ CKK+F C
Sbjct: 39 DSVQGNYIHIRMQQRNGRKSLTTVQGLNPKINLKLVVKECKKKFNC 84
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +2
Query: 257 EYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 361
E+G+++QLQGDQR+NI Q+L + K +KVHG
Sbjct: 93 EHGDIVQLQGDQRKNIAQFLVDERISKKALIKVHG 127
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = +1
Query: 58 TFDPFADAI---KSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEF 228
TFD FADA ++ VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E
Sbjct: 136 TFDAFADAEGEDAAAGRGAGGDYVHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKREL 195
Query: 229 AC 234
C
Sbjct: 196 CC 197
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +2
Query: 257 EYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 206 ELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 241
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +1
Query: 40 SIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACK 219
SIQNLN+ DPFA+ D VH+RI QR+GRK +TTV+GL + DLKKI++ K
Sbjct: 3 SIQNLNSADPFAEDSNLGGDS-GISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKHLK 61
Query: 220 KEFAC 234
K C
Sbjct: 62 KSLNC 66
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 263 GEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
G +++LQGD+R+ I +L + + + +K+HGF
Sbjct: 77 GMIIKLQGDKRKEIALFLIEEKISQKPSIKIHGF 110
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Frame = +1
Query: 37 MSIQNLNTFDPFADAIKS------SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLK 198
+ IQN DPFA+ S + L ++R QQRNGRK++TTVQGL DLK
Sbjct: 48 LDIQNFGVSDPFANDTSQAGGAGGSSTHLIRKLRNIRNQQRNGRKSVTTVQGLDKSLDLK 107
Query: 199 KIVRACKKEFAC 234
K+VRA KK+F+C
Sbjct: 108 KMVRALKKQFSC 119
Score = 41.9 bits (94), Expect = 0.015
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +2
Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 361
PE+G ++QLQGDQR + ++L + + +Q+++HG
Sbjct: 127 PEHGSIIQLQGDQRHAVKEFLEREAICSVDQIRIHG 162
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1
Query: 118 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E C
Sbjct: 498 VHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCC 536
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +2
Query: 257 EYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 545 ELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 580
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 37 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 174
+ +Q + FDPFA+A S ++ VH+RIQQRNG+K+LTTVQG
Sbjct: 35 IDVQIPSAFDPFAEAKDSGAPGAKE-YVHIRIQQRNGKKSLTTVQG 79
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1
Query: 97 DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
DD Q +H+R++QR GRK TTV+G+ E+D +KI++ KK +C
Sbjct: 13 DDFQTH-IHIRVEQRRGRKCFTTVEGIPPEFDYEKIMKYWKKWLSC 57
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 115 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
+VH RIQQRNGRK +TT+ G+ YD I++ K+ F C
Sbjct: 27 IVHFRIQQRNGRKCVTTITGIPERYDADLILKHFKRTFNC 66
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 263 GEV-LQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
GEV +L GDQR+ + G++ PE +K+HGF
Sbjct: 76 GEVEFKLSGDQRKAASNFFLAEGILLPENIKIHGF 110
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +1
Query: 115 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
++H+ +++R+ RKT T + G+ E+DL KI+R KK+F C
Sbjct: 21 VIHIHLKKRSARKTQTIIVGIPDEFDLNKIIRFWKKQFNC 60
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 257 EYGE--VLQLQGDQRENICQWLTKSGLVKPEQLKVHG 361
+YG+ ++L GD R+ I ++L + G+ + +KVHG
Sbjct: 70 DYGDQVTIRLTGDNRQQIAKFLVEEGIALQDNIKVHG 106
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 55 NTFDPFADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFA 231
+T + + + +E V G VH+R+QQR G+K +TTVQGL+ + + ++I R ++ +
Sbjct: 3 DTVEAIVNQQRETERAVLGGQKVHIRVQQRKGKKFVTTVQGLNQKLNFRRINREFQRRWG 62
Query: 232 C 234
C
Sbjct: 63 C 63
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 11/50 (22%)
Frame = +1
Query: 118 VHVRIQQRNGRKT-----------LTTVQGLSSEYDLKKIVRACKKEFAC 234
VH+R QQ GR LTTVQGL +++KK+V+A KK+FAC
Sbjct: 71 VHLRCQQTGGRPKRNMEGKKKPHMLTTVQGLPDRFNMKKVVKAFKKKFAC 120
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +2
Query: 260 YGEVLQLQGDQRENICQWL-TKSGL-VKPEQLKVHG 361
+GEV+Q+QGD R+ I ++L TK GL + E + VHG
Sbjct: 130 FGEVIQIQGDYRQKIYEFLTTKDGLELDEENVVVHG 165
>UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1;
Guillardia theta|Rep: Translation factor sui1 homolog -
Guillardia theta (Cryptomonas phi)
Length = 149
Score = 39.9 bits (89), Expect = 0.060
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Frame = +1
Query: 100 DVQDGLVHVRIQQRNGRKTLTTVQGLSSEY------------DLKKIVRACKKEFACKVR 243
++Q + +R+QQR GRK +T ++GL + DLKKI+RA K+ F C R
Sbjct: 49 NIQSDEIQIRLQQRTGRKFITVIEGLGNIVIINQIDKNKKIPDLKKILRAMKQRFGCNGR 108
>UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 family
protein; n=2; Trichomonas vaginalis G3|Rep: Translation
initiation factor SUI1 family protein - Trichomonas
vaginalis G3
Length = 111
Score = 38.7 bits (86), Expect = 0.14
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 118 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
+H+R QQ + R++LT +QGL + D K++ KK C
Sbjct: 29 IHIRYQQVSSRRSLTIIQGLPKKLDCDKVLSFFKKSLCC 67
>UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Protein
translation factor SUI1 homolog - Mimivirus
Length = 106
Score = 36.3 bits (80), Expect = 0.73
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 61 FDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 234
+DPF D + + + + +H++ +QR K++T ++ + + DLK ++ K F C
Sbjct: 7 YDPFNDGLDTEQHFEK---IHIKTKQRTKTKSITIIENIPEKIDLKLFLKKLKYTFHC 61
>UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 223
Score = 34.3 bits (75), Expect = 3.0
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 115 LVHVRIQQRNGRKTLTTVQGLSSE-YDLKKIVRACKKEFAC 234
++++++++RN K +TT+ GL DLK+ + K+F C
Sbjct: 142 MIYIKVKERNKNKFITTLSGLEKHGLDLKETSKKISKKFGC 182
>UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY00071;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00071 - Plasmodium yoelii yoelii
Length = 2736
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 703 QKHVNLLIELLQ--QFKNTMSYKNKNKLFRYIHY 608
Q VN I+L+ FKNT + KNKNKL IHY
Sbjct: 259 QYDVNNPIDLINIPNFKNTNNMKNKNKLLSLIHY 292
>UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|Rep:
CG30115-PD, isoform D - Drosophila melanogaster (Fruit
fly)
Length = 1593
Score = 33.1 bits (72), Expect = 6.8
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +1
Query: 7 LKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSE 186
++QR+ F R ++ N ++FD F ++++ E+ + + RN T +Q L++
Sbjct: 936 IRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQKLAAA 994
Query: 187 YDLKKIVRACKKEFACKVR 243
+K A K+E V+
Sbjct: 995 MRYRKRDAAVKEETKTPVK 1013
>UniRef50_Q4P436 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 466
Score = 33.1 bits (72), Expect = 6.8
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = -2
Query: 313 PLANILSLVALKLQHLAVLRCSTTVPCTRTPSCMPARSSSGHIPRKGLAP*SASYARFVA 134
P+A+IL LK+ ++++ + STT R+ + R SSGH+P P S+ V
Sbjct: 42 PVASILQASTLKIDNVSLSK-STTTRLARSRDELATRLSSGHLPHPDTEP---SFFYDVE 97
Query: 133 GYGRGLNHLERRPPSF 86
L E RP ++
Sbjct: 98 AVMLALQTREERPGAY 113
>UniRef50_Q6VZB4 Cluster: CNPV233 ankyrin repeat protein; n=1;
Canarypox virus|Rep: CNPV233 ankyrin repeat protein -
Canarypox virus (CNPV)
Length = 471
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 139 RNGRKTLTTVQGLSSEYDLKKIVRACKKEF 228
+N R TT++ +SS +L+KI+ CK EF
Sbjct: 376 KNTRAYCTTIKSISSRIELRKIMEDCKSEF 405
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,447,980
Number of Sequences: 1657284
Number of extensions: 13977623
Number of successful extensions: 36745
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 35404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36736
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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