Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0040
         (579 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q38DI1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_A0D2V5 Cluster: Chromosome undetermined scaffold_351, w...    33   4.9  

>UniRef50_Q38DI1 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 211

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +2

Query: 248 YLCNVIISFLFSEL*IYL-FFFCFSTYFILEGGCCSIFFFEFLAW 379
           ++C++ + F+FS L  +L FF+ F+++ IL      +FFF FL W
Sbjct: 96  FICSLHLFFIFSFLFSFLSFFYFFNSFIIL---LFDLFFFFFLFW 137


>UniRef50_A0D2V5 Cluster: Chromosome undetermined scaffold_351,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_351,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 598

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 50  MFFLVFYYYHK*IKRALCLISYSLSFLRLV 139
           +FF+VFYYY   ++  LC +S SL F+ L+
Sbjct: 434 IFFMVFYYYTPLLQVTLCYLSSSLCFIFLL 463


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,871,538
Number of Sequences: 1657284
Number of extensions: 7245713
Number of successful extensions: 12440
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12397
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)