Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0039
         (715 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q64QC1 Cluster: Putative DNA helicase; n=5; Bacteroides...    33   7.0  
UniRef50_A0NDX7 Cluster: ENSANGP00000031680; n=1; Anopheles gamb...    33   7.0  
UniRef50_UPI0000F1E099 Cluster: PREDICTED: similar to LOC560949 ...    33   9.2  

>UniRef50_Q64QC1 Cluster: Putative DNA helicase; n=5; Bacteroides|Rep:
            Putative DNA helicase - Bacteroides fragilis
          Length = 1957

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 19/78 (24%), Positives = 39/78 (50%)
 Frame = +1

Query: 10   KYYYLPILNGVIDKELIMENSGGNMCRCCASEGVYKDLNTTYHWMGEEEVYGDMLKDCFN 189
            K +Y   +   I KE +++   G +         +++LNT Y  + ++E+Y  +  +  +
Sbjct: 1209 KGFYHSFIEYAIGKEQVLQFFNGELFNDSIRR--FRELNTEYQELIKKELYTKLASNIPS 1266

Query: 190  VQLSVPESSDGGICEVCI 243
              L+  +SS+ GI + CI
Sbjct: 1267 FVLAAAQSSEVGILQKCI 1284


>UniRef50_A0NDX7 Cluster: ENSANGP00000031680; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000031680 - Anopheles gambiae
           str. PEST
          Length = 449

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +1

Query: 79  NMCRCCASEGVYKDLNTTYHWMGEEEVYGDMLKDCFNVQLSVPESSDGGICEVCITQLR 255
           +MCR C      ++L+  + + G   V   ++K C N++++  +     ICE C+ Q+R
Sbjct: 105 DMCRVCMGT---EELSDIFQFDGPVRVSDIIMKVCTNIRITARDHLPHKICEQCLGQVR 160


>UniRef50_UPI0000F1E099 Cluster: PREDICTED: similar to LOC560949
            protein; n=5; Danio rerio|Rep: PREDICTED: similar to
            LOC560949 protein - Danio rerio
          Length = 1224

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 523  EEVEKFRRRVAQET*EPEEKMHHHHIKKGR-AEEKEKNTLR*RPKTMR 663
            EE+EK R+R   E  E  +KM    +K+ R  EEKE+     R +T R
Sbjct: 1025 EELEKMRKRFEGEREEERQKMEEERLKQRREREEKEREYEEKRQETKR 1072


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,625,387
Number of Sequences: 1657284
Number of extensions: 11446520
Number of successful extensions: 34151
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34080
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)