Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0038
         (405 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E4A8D7 Cluster: PREDICTED: similar to Pck1 prote...    36   0.31 
UniRef50_Q16822 Cluster: Phosphoenolpyruvate carboxykinase [GTP]...    36   0.41 
UniRef50_Q651N4 Cluster: Putative uncharacterized protein OSJNBa...    33   2.9  
UniRef50_Q9L1F9 Cluster: SCO5446 protein; n=10; Actinomycetales|...    32   3.8  
UniRef50_Q0DCM2 Cluster: Os06g0313200 protein; n=13; Oryza sativ...    32   3.8  
UniRef50_UPI0000D663A4 Cluster: PREDICTED: hypothetical protein;...    31   6.6  
UniRef50_UPI0000EB1BB3 Cluster: Uncharacterized protein KIAA1543...    31   6.6  
UniRef50_Q4TAY1 Cluster: Chromosome undetermined SCAF7234, whole...    31   8.7  
UniRef50_Q2U5A3 Cluster: Mitochondrial tricarboxylate/dicarboxyl...    31   8.7  

>UniRef50_UPI0000E4A8D7 Cluster: PREDICTED: similar to Pck1 protein;
           n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to Pck1 protein - Strongylocentrotus purpuratus
          Length = 667

 Score = 35.9 bits (79), Expect = 0.31
 Identities = 11/25 (44%), Positives = 21/25 (84%)
 Frame = +2

Query: 326 QAALCQPEHVHVCDGSETXARALLQ 400
           +A +C+P+++H+CDGSET   +L++
Sbjct: 60  KADICRPDNIHICDGSETENASLIE 84


>UniRef50_Q16822 Cluster: Phosphoenolpyruvate carboxykinase [GTP],
           mitochondrial precursor; n=571; cellular organisms|Rep:
           Phosphoenolpyruvate carboxykinase [GTP], mitochondrial
           precursor - Homo sapiens (Human)
          Length = 640

 Score = 35.5 bits (78), Expect = 0.41
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 329 AALCQPEHVHVCDGSETXARALLQL 403
           A LCQPE +H+CDG+E    A L L
Sbjct: 52  ARLCQPEGIHICDGTEAENTATLTL 76


>UniRef50_Q651N4 Cluster: Putative uncharacterized protein
           OSJNBa0047P18.12; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0047P18.12 - Oryza sativa subsp. japonica (Rice)
          Length = 155

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 239 PPTKLPAXVDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDG 370
           P   LPA   +A  +ADHS         A+A  C P HV +  G
Sbjct: 39  PSANLPARAMQASSSADHSVGLSRHRASARARYCAPVHVRMLSG 82


>UniRef50_Q9L1F9 Cluster: SCO5446 protein; n=10;
           Actinomycetales|Rep: SCO5446 protein - Streptomyces
           coelicolor
          Length = 549

 Score = 32.3 bits (70), Expect = 3.8
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +3

Query: 174 HPRRLREEDGTMCSSGDWMXPRRPPNCLRGSTKPSP---QLTTLTPKVRAF-VERRLLCA 341
           H R  R  DG     GD +  R      RG TK +    ++ T+TPKV+A   E++ L A
Sbjct: 96  HTRYERTYDGLPVLGGDLVVHRSESGATRGVTKATEAAVKVATVTPKVKAAKAEQQALSA 155

Query: 342 SRSTCTCATA 371
           ++   +  TA
Sbjct: 156 AKDAGSSKTA 165


>UniRef50_Q0DCM2 Cluster: Os06g0313200 protein; n=13; Oryza
           sativa|Rep: Os06g0313200 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 879

 Score = 32.3 bits (70), Expect = 3.8
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +3

Query: 177 PRRLREEDGTMCSSGDWMXPRR-----PPNCLRGSTKPSPQLTTLTPKVRAFVERRLLCA 341
           PRRL EE+G   SS   + PRR     P  C    T  +P  +T T    A + RR LC 
Sbjct: 816 PRRLEEEEGKRSSSHRPLLPRRRAPIVPRYCAADLTTIAP-ASTKTHHCSARLPRRCLCL 874

Query: 342 SR 347
            R
Sbjct: 875 GR 876


>UniRef50_UPI0000D663A4 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 175

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +2

Query: 221 RLDAAAPPTKLPAXVDEAFPTADHSHS-----KGSRVRGAQAALCQ 343
           RL   +P T LPA   EA P    +H+     KG+R RG   A CQ
Sbjct: 37  RLAHNSPHTPLPAPCKEALPARLRAHAARGAPKGARARGGLPASCQ 82


>UniRef50_UPI0000EB1BB3 Cluster: Uncharacterized protein KIAA1543.;
           n=1; Canis lupus familiaris|Rep: Uncharacterized protein
           KIAA1543. - Canis familiaris
          Length = 1279

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 314 RANLWSESGQLWGRLRRPXQAVWWAARXH 228
           R++ W  +G+ WG   RP ++  W AR H
Sbjct: 116 RSSAWEAAGRSWGPQSRPERSQSWMARAH 144


>UniRef50_Q4TAY1 Cluster: Chromosome undetermined SCAF7234, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7234,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 719

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 399 CSRALASVSEPSHTCTCSGWHRAACAPRTREPLE*EWSAV 280
           C    A + +P+HTC+ SGW R +   R  + L  +W+ V
Sbjct: 589 CVPWTAQLFQPNHTCSISGWGRTSDGGRASQVL--QWANV 626


>UniRef50_Q2U5A3 Cluster: Mitochondrial tricarboxylate/dicarboxylate
           carrier proteins; n=8; Pezizomycotina|Rep: Mitochondrial
           tricarboxylate/dicarboxylate carrier proteins -
           Aspergillus oryzae
          Length = 316

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = +1

Query: 202 AQCAQVAIGCXRAAHQTACXGR------RSLPHS*PLSLQRFARSWSAGCS 336
           A+C   A+GC ++A+ T    +      R LP    L    F + W AGC+
Sbjct: 38  AECMVYALGCFKSAYSTCPVAKTRSQLNRKLPDGKKLPWPPFGKQWYAGCT 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,615,559
Number of Sequences: 1657284
Number of extensions: 5690229
Number of successful extensions: 16890
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16887
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)