Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10d09
(468 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 200 2e-50
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 176 2e-43
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 153 2e-36
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 145 4e-34
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 135 5e-31
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 134 7e-31
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 133 2e-30
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 114 8e-25
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 112 3e-24
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 98 1e-19
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 84 1e-15
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 82 7e-15
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 2e-12
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 67 2e-10
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 60 3e-08
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 52 5e-06
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 50 3e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 48 1e-04
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 46 4e-04
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 45 7e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 43 0.004
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 40 0.027
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 40 0.027
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 39 0.047
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 38 0.083
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 38 0.14
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.19
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 37 0.25
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 36 0.58
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 36 0.58
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 2.4
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 3.1
UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 33 4.1
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 5.4
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 7.2
UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 32 7.2
UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep: M... 32 7.2
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 32 7.2
UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stabilit... 32 7.2
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 32 7.2
UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25 ... 31 9.5
UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Re... 31 9.5
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 9.5
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 31 9.5
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 200 bits (487), Expect = 2e-50
Identities = 95/108 (87%), Positives = 100/108 (92%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 414
ERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 176 bits (429), Expect = 2e-43
Identities = 81/106 (76%), Positives = 95/106 (89%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 408
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 153 bits (370), Expect = 2e-36
Identities = 72/106 (67%), Positives = 84/106 (79%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
IEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEE
Sbjct: 72 IEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEE 131
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 408
ERERRDNYVPE SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 132 ERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 145 bits (352), Expect = 4e-34
Identities = 69/109 (63%), Positives = 87/109 (79%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
IEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEE
Sbjct: 18 IEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEE 76
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 417
ERE RDNYVPE+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 77 ERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 135 bits (326), Expect = 5e-31
Identities = 62/105 (59%), Positives = 83/105 (79%)
Frame = +1
Query: 94 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 273
++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE+E
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKE 131
Query: 274 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 408
RER+DNYVPE+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 132 RERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 134 bits (325), Expect = 7e-31
Identities = 63/112 (56%), Positives = 85/112 (75%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGY 426
ERERR ++VPE SALE + I VD +T +ML L ++ G++ Q + Y
Sbjct: 77 ERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 133 bits (321), Expect = 2e-30
Identities = 61/106 (57%), Positives = 85/106 (80%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 408
ERR +Y+PEVSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 114 --ERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 114 bits (275), Expect = 8e-25
Identities = 56/106 (52%), Positives = 78/106 (73%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V +
Sbjct: 66 LEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGG 119
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 408
ER +++ YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 120 ER-KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 112 bits (270), Expect = 3e-24
Identities = 52/91 (57%), Positives = 70/91 (76%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEE
Sbjct: 57 IEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEE 116
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLK 363
ERERR +YVPE S+++ D + D D K ML+
Sbjct: 117 ERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 97.9 bits (233), Expect = 1e-19
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
+EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEE
Sbjct: 17 VEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEE 76
Query: 271 ERERRDNYVPEVSALEHDI---IEVDPDTKDMLKMLD 372
ERERR ++ P S ++ I + VD T ML+ L+
Sbjct: 77 ERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 84.2 bits (199), Expect = 1e-15
Identities = 43/98 (43%), Positives = 61/98 (62%)
Frame = +1
Query: 94 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 273
EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S
Sbjct: 18 EKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRR 76
Query: 274 RERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 387
R R NYVPE S L+ +I EVD TK+MLK+ F +++
Sbjct: 77 RRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 81.8 bits (193), Expect = 7e-15
Identities = 36/90 (40%), Positives = 59/90 (65%)
Frame = +1
Query: 94 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 273
EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++ + IK EEE
Sbjct: 18 EKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEE 77
Query: 274 RERRDNYVPEVSALEHDIIEVDPDTKDMLK 363
RER++N +P+ S L+ D +EVD T +M+K
Sbjct: 78 RERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 2e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 199 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 378
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 66.9 bits (156), Expect = 2e-10
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = +1
Query: 97 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEE 270
KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK
Sbjct: 19 KYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDIN 78
Query: 271 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 387
E + S E + VD +TK M+K L F N N
Sbjct: 79 NIEINNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 228
I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 17 IKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +1
Query: 301 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 408
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 52.4 bits (120), Expect = 5e-06
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 246
+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 17 VEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 50.0 bits (114), Expect = 3e-05
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
+E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE
Sbjct: 17 VEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEI 74
Query: 271 ERERRDNYVPEV 306
+ Y+ +
Sbjct: 75 TMTDEEEYIRRI 86
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 216
IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 17 IETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 46.0 bits (104), Expect = 4e-04
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 94 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEE 270
EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L
Sbjct: 35 EKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AA 92
Query: 271 ERERRDNYVPEVSALEHDIIEVDP 342
ER +D V L+ +++ +P
Sbjct: 93 ERISKDIVCQNVGFLQINMLMSEP 116
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 45.2 bits (102), Expect = 7e-04
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 270
+E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q
Sbjct: 17 VEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHA 76
Query: 271 ERER 282
E R
Sbjct: 77 EEFR 80
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 121 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 210
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 42.7 bits (96), Expect = 0.004
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 216
+EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 17 LEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 39.9 bits (89), Expect = 0.027
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISIK 258
+E + ++ DF NK+I E++I+ +K L+N+IAG+ T ++ + +R + + + K
Sbjct: 12 LETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASK 71
Query: 259 LQEEERERRDNYVPEVSALEHDIIEVDPDTK 351
E+E + V E E P+T+
Sbjct: 72 SLEQEAQVEPEPVEATENTEAPAAEETPETE 102
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 39.9 bits (89), Expect = 0.027
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 228
IE Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 17 IENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 39.1 bits (87), Expect = 0.047
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 222
++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 17 LKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 38.3 bits (85), Expect = 0.083
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 216
+E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 16 MERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 37.5 bits (83), Expect = 0.14
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = -2
Query: 209 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRTRP 45
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T + T P
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFTYVGLTVP 71
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 37.1 bits (82), Expect = 0.19
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 241 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 420
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQT 171
Query: 421 GYG 429
+G
Sbjct: 172 LHG 174
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 36.7 bits (81), Expect = 0.25
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 216
+ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 17 LRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.5 bits (78), Expect = 0.58
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 97 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 210
K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.5 bits (78), Expect = 0.58
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 207
+E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 16 LEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 34.3 bits (75), Expect = 1.3
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +1
Query: 139 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA- 312
RIC I ++ +P+ + G L +R++ + + +K + EE +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 313 --LEHDIIEVDPDTKDMLKMLDFNNINGLQ 396
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 2.4
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 190 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 366
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 367 LD 372
L+
Sbjct: 506 LE 507
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 121 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 210
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 644
Score = 32.7 bits (71), Expect = 4.1
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 169 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 285
TKP N+ GF + ++ +Q++ S K++EEERE+R
Sbjct: 206 TKPKVNRPQGFTIGQILKIEENQIQYKSKKIEEEEREQR 244
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 32.7 bits (71), Expect = 4.1
Identities = 14/60 (23%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 94 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS-QVRGISIKLQEE 270
+K+ + + +D NK++ +E + +K ++N+IAG+ T ++ ++ + + S +L+E+
Sbjct: 18 DKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKNKVEAQEASEELEED 77
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 5.4
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 205 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 360
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 31.9 bits (69), Expect = 7.2
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 223 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 387
LR ++ I KLQ EE+ R+N+ E S L D+++ D D K D +NI+
Sbjct: 121 LRELRMENIRNKLQSEEKASRENHESEKSLL-RDLMKADLDEKIRRLEEDRHNID 174
>UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=7; Actinomycetales|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase - Frankia
sp. (strain CcI3)
Length = 482
Score = 31.9 bits (69), Expect = 7.2
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 142 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEH 321
+C ++ + P + L + G+ + L+ RH VRG+ + + E+ + V E
Sbjct: 203 VCRKLGLRPGERLLDIGCGWGSMLIHAARHHGVRGVGVTISVEQATQARRLVAEADLA-- 260
Query: 322 DIIEV 336
D+IE+
Sbjct: 261 DVIEI 265
>UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep:
Mob/Pre - Bacillus coagulans
Length = 474
Score = 31.9 bits (69), Expect = 7.2
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +1
Query: 226 RHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML----KMLDF-NNIN 387
+H Q +G I+ +EE ER+ VPE + + +V +TK++ ++ +F NN+N
Sbjct: 164 KHLQEKGFEIQRGKEESERKHLSVPEYKEAKEEAKKVKEETKELASKASQLAEFHNNVN 222
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.9 bits (69), Expect = 7.2
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 235 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEV 336
+VRG+++ + E+E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
>UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stability
and mRNA decay; n=1; Methanopyrus kandleri|Rep: NMD
protein affecting ribosome stability and mRNA decay -
Methanopyrus kandleri
Length = 354
Score = 31.9 bits (69), Expect = 7.2
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 235 QVRGISIKLQEEERERRDNYVPEVSA--LEHDIIEVDPDTKDMLKMLDF--NNINGLQLT 402
QVR + KL E ERE +N+V E +A LE D + D + + +DF ++N +
Sbjct: 152 QVRSLRGKLTEREREEVENFVTEAAASLLERDPMAYISDVEYPEEGIDFYIGSLNAARKL 211
Query: 403 QPATQGGYGG 432
YGG
Sbjct: 212 ARRLVDAYGG 221
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 31.9 bits (69), Expect = 7.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 222
+ Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 31 LSTYEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
>UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164).; n=1;
Takifugu rubripes|Rep: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164). - Takifugu
rubripes
Length = 661
Score = 31.5 bits (68), Expect = 9.5
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 136 KRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER---RDNYVPEV 306
KR EE+ I + L L RR H R + Q++ERER D+ V E
Sbjct: 346 KREKEELEEIRQRLLDEGHPNPDAELRRREHHRGSRSHRDRRQDQERERPAHTDHEVEEG 405
Query: 307 SALEHDIIEVDPDTKDMLK 363
E+D E +P+TK LK
Sbjct: 406 EEEEYDNDEDNPETKPCLK 424
>UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 544
Score = 31.5 bits (68), Expect = 9.5
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +1
Query: 193 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 372
A +++HL+RR+ + K Q EE ++ + + + LEHD+I + +T D+LK L+
Sbjct: 41 AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 9.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 282 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 154
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 31.5 bits (68), Expect = 9.5
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 91 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 210
++ + + L F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 63 LKNHKSEFGLSFEENKKTLERLSTIRYKILKNEIAGYITN 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,318,362
Number of Sequences: 1657284
Number of extensions: 7677441
Number of successful extensions: 21077
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 20590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21064
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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