Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0132
         (504 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55A06 Cluster: DEAD/DEAH box helicase domain-containin...    34   2.1  
UniRef50_UPI00015B4580 Cluster: PREDICTED: similar to ENSANGP000...    32   6.4  
UniRef50_Q29FU4 Cluster: GA11391-PA; n=1; Drosophila pseudoobscu...    32   6.4  
UniRef50_Q1E8I5 Cluster: Predicted protein; n=1; Coccidioides im...    32   6.4  

>UniRef50_Q55A06 Cluster: DEAD/DEAH box helicase domain-containing
           protein; n=1; Dictyostelium discoideum AX4|Rep:
           DEAD/DEAH box helicase domain-containing protein -
           Dictyostelium discoideum AX4
          Length = 947

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
 Frame = +2

Query: 44  HEAKGVGIPPTQPPPSDNTANNRKICSKIPKHQVCTMDRAQIINGALESKE---LRSDTY 214
           H+ K +GIP      S +   NR +  ++   + C +    I    L   E   L    Y
Sbjct: 511 HKLKSLGIPAESINSSGSQRENRDVLDQLLNGETCKLKLIYITPERLAQSEFLHLLDQLY 570

Query: 215 ELVRLRRCLRDQA*PLNLSESLFRTHYRI 301
           +  RLRR + D+A  ++     FR  YR+
Sbjct: 571 DQGRLRRLVVDEAHCISEWGHSFRPKYRL 599


>UniRef50_UPI00015B4580 Cluster: PREDICTED: similar to
           ENSANGP00000014578; n=2; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000014578 - Nasonia
           vitripennis
          Length = 328

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 167 IINGALESKELRSDTYELVRL-RRCLRDQA*PLNLSESLFRTHYRISKHQYLQL 325
           I N   E +  R + +  +RL R+ LRD + P  L    FR +YR+  H  ++L
Sbjct: 11  IFNAEQEERVQRLNRFHQLRLERQQLRDVSNPFTLPAEFFRRYYRMPPHVVMRL 64


>UniRef50_Q29FU4 Cluster: GA11391-PA; n=1; Drosophila
           pseudoobscura|Rep: GA11391-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 411

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 17  VDPPGCRNRHEAKGVGIPPTQPPPSDNTAN 106
           V PP  +N+H+ +    PP  PPP+ N  N
Sbjct: 53  VQPPAAQNQHQHQQAQQPPPLPPPNTNMKN 82


>UniRef50_Q1E8I5 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 304

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +2

Query: 2   RRSKLVDPPGCRNRHEAKGVGIPPTQPPPSDNTANNRKICSKIPKHQVCTMDRAQIIN 175
           +RSK  DPP       A   G  P+ PP  DN     K  S + +H    +   + +N
Sbjct: 89  QRSKYADPPAAYQPPPAPNYGYQPSAPPVYDNPPPPTKNWSPVAQHAQFDVPTQKAVN 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,104,719
Number of Sequences: 1657284
Number of extensions: 9283556
Number of successful extensions: 25186
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25138
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)