Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0058
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D568E8 Cluster: PREDICTED: similar to CG2100-PA;... 235 7e-61
UniRef50_Q9VNH2 Cluster: CG2100-PA; n=9; Coelomata|Rep: CG2100-P... 232 6e-60
UniRef50_UPI00015B5D79 Cluster: PREDICTED: similar to ENSANGP000... 226 3e-58
UniRef50_UPI0000DB7A53 Cluster: PREDICTED: similar to CG2100-PA;... 217 2e-55
UniRef50_UPI0000E49DF6 Cluster: PREDICTED: similar to Chain A, C... 215 1e-54
UniRef50_Q96Q11 Cluster: tRNA-nucleotidyltransferase 1, mitochon... 198 7e-50
UniRef50_Q5C3N6 Cluster: SJCHGC09232 protein; n=1; Schistosoma j... 192 5e-48
UniRef50_Q93795 Cluster: Putative uncharacterized protein; n=2; ... 189 6e-47
UniRef50_A7RRV1 Cluster: Predicted protein; n=1; Nematostella ve... 161 2e-38
UniRef50_Q40IR0 Cluster: Polynucleotide adenylyltransferase; n=8... 105 1e-21
UniRef50_Q4FPG1 Cluster: Poly(A) Polymerase; n=3; Bacteria|Rep: ... 100 3e-20
UniRef50_A3UG83 Cluster: Probable poly(A) polymerase; n=1; Ocean... 99 4e-20
UniRef50_A3VV21 Cluster: Possible poly(A) polymerase; n=1; Parvu... 99 1e-19
UniRef50_Q2GDC2 Cluster: PolyA polymerase family protein; n=1; N... 98 2e-19
UniRef50_Q89SD1 Cluster: Poly(A) polymerase; n=11; Bradyrhizobia... 97 3e-19
UniRef50_Q8FZD7 Cluster: PolyA polymerase family protein; n=13; ... 96 7e-19
UniRef50_Q9AB26 Cluster: Poly A polymerase family protein; n=3; ... 93 4e-18
UniRef50_Q1GRA3 Cluster: Polynucleotide adenylyltransferase regi... 93 4e-18
UniRef50_Q5FU27 Cluster: Poly(A) polymerase/t-RNA nucleotidyltra... 93 7e-18
UniRef50_Q0BRM1 Cluster: Poly(A) polymerase; n=2; Acetobacterace... 92 9e-18
UniRef50_Q5NNN0 Cluster: TRNA nucleotidyltransferase; n=3; Sphin... 91 2e-17
UniRef50_Q0ARR5 Cluster: Polynucleotide adenylyltransferase regi... 91 2e-17
UniRef50_A5NWU9 Cluster: Polynucleotide adenylyltransferase regi... 91 3e-17
UniRef50_Q2VZL3 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 90 5e-17
UniRef50_Q0C5B7 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 90 5e-17
UniRef50_Q5P9P8 Cluster: Poly (A) polymerase; n=5; Anaplasmatace... 86 8e-16
UniRef50_A7DHD6 Cluster: Polynucleotide adenylyltransferase regi... 86 8e-16
UniRef50_A0NYQ1 Cluster: Poly(A) polymerase; n=1; Stappia aggreg... 86 8e-16
UniRef50_Q6G2K6 Cluster: Poly(A) polymerase; n=6; Rhizobiales|Re... 85 2e-15
UniRef50_A5CCR6 Cluster: PolyA polymerase; n=1; Orientia tsutsug... 85 2e-15
UniRef50_Q2RXH4 Cluster: Polynucleotide adenylyltransferase regi... 84 3e-15
UniRef50_Q0FDP1 Cluster: Poly A polymerase family protein; n=1; ... 84 3e-15
UniRef50_Q1GCJ3 Cluster: Polynucleotide adenylyltransferase regi... 82 1e-14
UniRef50_Q660G6 Cluster: Polynucleotide adenylyltransferase; n=3... 81 2e-14
UniRef50_Q1VJ65 Cluster: Polynucleotide adenylyl transferase; n=... 81 2e-14
UniRef50_O25357 Cluster: Poly(A) polymerase; n=4; Helicobacter|R... 79 7e-14
UniRef50_A0NJB1 Cluster: Polynucleotide adenylyltransferase; n=2... 78 2e-13
UniRef50_Q1EZ98 Cluster: HDIG; n=1; Clostridium oremlandii OhILA... 77 3e-13
UniRef50_A6DP87 Cluster: Putative poly(A) polymerase; n=1; Lenti... 77 3e-13
UniRef50_A6NVT9 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_A4EGY8 Cluster: PolyA polymerase family protein; n=2; R... 77 5e-13
UniRef50_P42977 Cluster: CCA-adding enzyme; n=3; Bacillus|Rep: C... 76 8e-13
UniRef50_Q92JQ2 Cluster: Poly(A) polymerase [EC:2.7.7.19]; n=14;... 75 2e-12
UniRef50_Q99U32 Cluster: CCA-adding enzyme; n=16; Staphylococcus... 74 3e-12
UniRef50_Q3XW94 Cluster: Polynucleotide adenylyltransferase; n=1... 73 4e-12
UniRef50_A4XLP3 Cluster: TRNA adenylyltransferase; n=1; Caldicel... 73 4e-12
UniRef50_Q895R6 Cluster: Poly(A) polymerase; n=9; Clostridium|Re... 73 6e-12
UniRef50_Q0TV45 Cluster: PolyA polymerase family protein; n=3; C... 73 6e-12
UniRef50_Q1VLB3 Cluster: PolyA polymerase family protein; n=1; P... 73 8e-12
UniRef50_Q1FP87 Cluster: TRNA adenylyltransferase; n=4; Clostrid... 73 8e-12
UniRef50_Q8F4S0 Cluster: Poly(A) polymerase; n=4; Leptospira|Rep... 71 2e-11
UniRef50_A4A0Y5 Cluster: Poly A polymerase; n=1; Blastopirellula... 71 2e-11
UniRef50_Q5FKF0 Cluster: CCA-adding enzyme; n=5; Lactobacillus|R... 71 2e-11
UniRef50_A5Z8C9 Cluster: Putative uncharacterized protein; n=2; ... 71 3e-11
UniRef50_Q8RJX5 Cluster: Polynucleotide adenyltransferase; n=4; ... 69 1e-10
UniRef50_Q5KXX0 Cluster: CCA-adding enzyme; n=4; Bacillaceae|Rep... 69 1e-10
UniRef50_A6CRX0 Cluster: tRNA nucleotidyltransferase; n=1; Bacil... 67 3e-10
UniRef50_A3IG30 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 67 4e-10
UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus ... 66 7e-10
UniRef50_Q2B3W5 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 66 9e-10
UniRef50_A0Z581 Cluster: Poly(A) polymerase; n=1; marine gamma p... 65 2e-09
UniRef50_UPI0000E87F63 Cluster: poly(A) polymerase; n=1; Methylo... 64 2e-09
UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase regi... 64 2e-09
UniRef50_Q92AA3 Cluster: CCA-adding enzyme; n=11; Listeria|Rep: ... 64 2e-09
UniRef50_Q81ST6 Cluster: CCA-adding enzyme; n=11; Bacillus cereu... 64 4e-09
UniRef50_Q7UWK0 Cluster: Poly A polymerase; n=1; Pirellula sp.|R... 63 5e-09
UniRef50_Q6MM27 Cluster: Poly A polymerase; n=1; Bdellovibrio ba... 63 5e-09
UniRef50_A6GIH1 Cluster: Polynucleotide adenylyltransferase regi... 63 5e-09
UniRef50_Q73NW9 Cluster: PolyA polymerase family protein; n=1; T... 63 6e-09
UniRef50_A6DGQ3 Cluster: RNA-poly(A) polymerase; n=1; Lentisphae... 62 1e-08
UniRef50_Q8DUL8 Cluster: CCA-adding enzyme; n=44; Streptococcace... 62 1e-08
UniRef50_Q9JZY9 Cluster: PolyA polymerase; n=4; Neisseria|Rep: P... 62 1e-08
UniRef50_A6CGS1 Cluster: Metal dependent phosphohydrolase; n=1; ... 61 2e-08
UniRef50_Q88W02 Cluster: CCA-adding enzyme; n=10; Lactobacillale... 61 2e-08
UniRef50_Q1IUE8 Cluster: Metal dependent phosphohydrolase; n=2; ... 61 3e-08
UniRef50_Q19Y52 Cluster: Gp8; n=1; Mycobacterium phage Wildcat|R... 61 3e-08
UniRef50_A1HMM1 Cluster: Polynucleotide adenylyltransferase; n=1... 60 3e-08
UniRef50_Q9Z6U2 Cluster: Poly A Polymerase; n=9; Chlamydiaceae|R... 60 4e-08
UniRef50_Q6M1D4 Cluster: POLYA POLYMERASE; n=11; Corynebacterine... 60 4e-08
UniRef50_Q41GT8 Cluster: Polynucleotide adenylyltransferase; n=1... 60 4e-08
UniRef50_Q1YQK0 Cluster: Poly(A) polymerase; n=1; gamma proteoba... 60 4e-08
UniRef50_A6PUV6 Cluster: Poly(A) polymerase precursor; n=1; Vict... 60 6e-08
UniRef50_A5CWU4 Cluster: Poly(A) polymerase; n=2; sulfur-oxidizi... 59 8e-08
UniRef50_Q7VFG8 Cluster: Poly(A) polymerase; n=1; Helicobacter h... 59 1e-07
UniRef50_Q73LY6 Cluster: PolyA polymerase family protein; n=1; T... 59 1e-07
UniRef50_A6FZN1 Cluster: Poly(A) polymerase; n=1; Plesiocystis p... 59 1e-07
UniRef50_A0UUV7 Cluster: Metal dependent phosphohydrolase; n=1; ... 59 1e-07
UniRef50_Q1Q5Z9 Cluster: Similar to poly(A) polymerase; n=2; Can... 58 1e-07
UniRef50_A4E6N1 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_Q9HV72 Cluster: Poly(A) polymerase; n=30; cellular orga... 58 2e-07
UniRef50_Q6F852 Cluster: Poly(A) polymerase I; n=2; Acinetobacte... 58 2e-07
UniRef50_A3DF92 Cluster: Metal dependent phosphohydrolase; n=1; ... 58 2e-07
UniRef50_A6T217 Cluster: Poly(A) polymerase; n=11; Betaproteobac... 58 2e-07
UniRef50_Q6MEY5 Cluster: Putative poly A polymerase; n=1; Candid... 57 4e-07
UniRef50_Q4JSD7 Cluster: TRNA nucleotidyltransferase; n=1; Coryn... 57 4e-07
UniRef50_Q7P2R0 Cluster: POLY(A) POLYMERASE; n=3; Fusobacterium ... 57 4e-07
UniRef50_Q6AQS1 Cluster: Probable polyA polymerase; n=1; Desulfo... 56 5e-07
UniRef50_A7HCV9 Cluster: tRNA cytidylyltransferase; n=2; Anaerom... 56 5e-07
UniRef50_A5WHD2 Cluster: Poly(A) polymerase; n=3; Psychrobacter|... 56 7e-07
UniRef50_Q9F7R3 Cluster: Predicted poly(A) polymerase; n=1; uncu... 56 1e-06
UniRef50_Q04RG6 Cluster: TRNA nucleotidyltransferase; n=4; Lepto... 56 1e-06
UniRef50_Q6YRB3 Cluster: TRNA nucleotidyltransferase/polyA polym... 55 2e-06
UniRef50_Q126S3 Cluster: Poly(A) polymerase; n=9; Burkholderiale... 55 2e-06
UniRef50_Q67QK4 Cluster: Putative RNA nucleotidyltransferase; n=... 54 2e-06
UniRef50_Q1NNS3 Cluster: Poly(A) polymerase, PcnB; n=2; delta pr... 54 4e-06
UniRef50_A1RG69 Cluster: Poly(A) polymerase; n=15; Gammaproteoba... 54 4e-06
UniRef50_O83294 Cluster: Polynucleotide adenylyltransferase; n=1... 53 5e-06
UniRef50_Q1LJ89 Cluster: Poly(A) polymerase; n=1; Ralstonia meta... 53 5e-06
UniRef50_A6P236 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06
UniRef50_Q5ZVA2 Cluster: Poly(A) polymerase I; n=4; Legionella p... 52 1e-05
UniRef50_A7H723 Cluster: Poly(A) polymerase; n=2; Anaeromyxobact... 52 1e-05
UniRef50_Q62HE1 Cluster: PolyA polymerase; n=45; cellular organi... 52 2e-05
UniRef50_Q8ZRQ8 Cluster: Poly(A) polymerase; n=89; Proteobacteri... 52 2e-05
UniRef50_Q6MHS6 Cluster: Poly(A) polymerase; n=1; Bdellovibrio b... 51 2e-05
UniRef50_Q057U5 Cluster: Poly(A) polymerase I; n=1; Buchnera aph... 50 4e-05
UniRef50_Q9PLM2 Cluster: Poly(A) polymerase family protein; n=7;... 50 5e-05
UniRef50_Q6MBL7 Cluster: Putative Poly(A) polymerase; n=1; Candi... 50 5e-05
UniRef50_Q605H2 Cluster: PolyA polymerase; n=2; Gammaproteobacte... 50 5e-05
UniRef50_Q39ZX1 Cluster: Poly(A) polymerase; n=2; Desulfuromonad... 50 5e-05
UniRef50_A7BYS8 Cluster: Poly(A) polymerase; n=1; Beggiatoa sp. ... 50 5e-05
UniRef50_Q2J4B5 Cluster: Metal dependent phosphohydrolase; n=40;... 50 6e-05
UniRef50_O83605 Cluster: Polynucleotide adenylyltransferase; n=1... 50 6e-05
UniRef50_A0LF07 Cluster: Polynucleotide adenylyltransferase regi... 49 1e-04
UniRef50_Q9KC89 Cluster: CCA-adding enzyme; n=1; Bacillus halodu... 49 1e-04
UniRef50_Q2ACT2 Cluster: CBS:Phosphoesterase, RecJ-like:Polynucl... 48 1e-04
UniRef50_Q093R8 Cluster: Poly(A) polymerase; n=2; Cystobacterine... 48 2e-04
UniRef50_A6TR64 Cluster: Polynucleotide adenylyltransferase regi... 48 2e-04
UniRef50_P44439 Cluster: Probable poly(A) polymerase; n=24; Gamm... 48 3e-04
UniRef50_Q83EM9 Cluster: PolyA polymerase; n=3; Coxiella burneti... 47 3e-04
UniRef50_Q31FF3 Cluster: Poly(A) polymerase; n=1; Thiomicrospira... 47 3e-04
UniRef50_A6W2I1 Cluster: Poly(A) polymerase; n=4; Oceanospirilla... 47 3e-04
UniRef50_A4M1Z9 Cluster: Poly(A) polymerase; n=1; Geobacter bemi... 47 3e-04
UniRef50_A5EWQ4 Cluster: Poly(A) polymerase PcnB; n=1; Dicheloba... 46 6e-04
UniRef50_A4M1T5 Cluster: Polynucleotide adenylyltransferase regi... 46 6e-04
UniRef50_Q747L5 Cluster: PolyA polymerase; n=4; Desulfuromonadal... 46 8e-04
UniRef50_Q0AB71 Cluster: Poly(A) polymerase; n=1; Alkalilimnicol... 46 8e-04
UniRef50_A4RUG6 Cluster: Predicted protein; n=2; Ostreococcus|Re... 45 0.002
UniRef50_A6GB74 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A6Q8W0 Cluster: Polynucleotide adenylyltransferase/meta... 44 0.003
UniRef50_A2DV13 Cluster: PolyA polymerase family protein; n=1; T... 44 0.003
UniRef50_Q5WGA1 Cluster: CCA-adding enzyme; n=1; Bacillus clausi... 44 0.003
UniRef50_A5UUL6 Cluster: Polynucleotide adenylyltransferase/meta... 44 0.004
UniRef50_Q7XV96 Cluster: OSJNBb0039F02.3 protein; n=3; Oryza sat... 44 0.004
UniRef50_Q6ASD5 Cluster: Related to poly(A) polymerase; n=1; Des... 43 0.005
UniRef50_Q5KM57 Cluster: TRNA adenylyltransferase, putative; n=2... 42 0.009
UniRef50_Q2ADM5 Cluster: Polynucleotide adenylyltransferase regi... 42 0.013
UniRef50_Q74CU0 Cluster: PolyA polymerase family protein; n=5; D... 42 0.017
UniRef50_Q3EZB5 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 42 0.017
UniRef50_A3DD90 Cluster: Polynucleotide adenylyltransferase regi... 42 0.017
UniRef50_Q5NIG4 Cluster: CCA-adding enzyme; n=12; Francisella tu... 42 0.017
UniRef50_Q191T3 Cluster: Polynucleotide adenylyltransferase regi... 41 0.022
UniRef50_A7HLG0 Cluster: Polynucleotide adenylyltransferase regi... 41 0.022
UniRef50_Q9WZH4 Cluster: TRNA nucleotidyl transferase-related pr... 41 0.029
UniRef50_A0BX57 Cluster: Chromosome undetermined scaffold_133, w... 41 0.029
UniRef50_Q2LST9 Cluster: Poly A polymerase; n=1; Syntrophus acid... 40 0.038
UniRef50_UPI00004993B2 Cluster: tRNA nucleotidyltransferase; n=1... 40 0.051
UniRef50_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=5; core eudicotyled... 40 0.051
UniRef50_Q3E7W1 Cluster: Uncharacterized protein At1g28090.1; n=... 40 0.051
UniRef50_UPI00006CBA87 Cluster: polyA polymerase family protein;... 40 0.067
UniRef50_Q3ZZE1 Cluster: PolyA polymerase family protein; n=3; D... 40 0.067
UniRef50_A6DBJ0 Cluster: Putative RNA nucleotidyltransferase; n=... 40 0.067
UniRef50_O97001 Cluster: Possible tRNA nucleotidyltransferase; n... 40 0.067
UniRef50_Q94K06 Cluster: TRNA adenylyltransferase-like protein; ... 39 0.088
UniRef50_Q30UP5 Cluster: Polynucleotide adenylyltransferase regi... 39 0.12
UniRef50_Q4U9X9 Cluster: Cardiolipin synthetase, putative; n=2; ... 39 0.12
UniRef50_Q10S77 Cluster: PolyA polymerase family protein, expres... 38 0.15
UniRef50_Q97HE9 Cluster: TRNA nucleotidyltransferase family enzy... 38 0.20
UniRef50_Q7NKM4 Cluster: Gll1453 protein; n=1; Gloeobacter viola... 38 0.20
UniRef50_Q3AAR6 Cluster: PolyA polymerase family protein; n=1; C... 38 0.27
UniRef50_A5UX62 Cluster: Polynucleotide adenylyltransferase regi... 37 0.36
UniRef50_A4M1Z2 Cluster: Metal dependent phosphohydrolase; n=1; ... 37 0.36
UniRef50_A3LSZ1 Cluster: Predicted protein; n=2; Saccharomycetac... 37 0.36
UniRef50_Q8A6B0 Cluster: TRNA nucleotidyltransferase; n=10; Bact... 37 0.47
UniRef50_A5G663 Cluster: Polynucleotide adenylyltransferase regi... 37 0.47
UniRef50_A5K4L8 Cluster: tRNA nucleotidyltransferase, putative; ... 37 0.47
UniRef50_Q2LR14 Cluster: TRNA nucleotidyltransferase; n=1; Syntr... 36 0.62
UniRef50_Q0AVZ3 Cluster: TRNA nucleotidyltransferase; n=2; Syntr... 36 0.62
UniRef50_Q63YC3 Cluster: Multifunctional CCA protein [Includes: ... 36 0.62
UniRef50_A0XYS5 Cluster: TRNA nucleotidyl transferase; n=2; Alte... 36 0.82
UniRef50_Q6CSU9 Cluster: Similarity; n=2; Kluyveromyces lactis|R... 36 0.82
UniRef50_P45269 Cluster: Multifunctional CCA protein [Includes: ... 36 0.82
UniRef50_A3JBM7 Cluster: Fused tRNA nucleotidyl transferase/2'3'... 36 1.1
UniRef50_Q54BQ2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q5AME1 Cluster: Potential tRNA CCA-pyrophosphorylase; n... 36 1.1
UniRef50_Q820V9 Cluster: CCA-adding enzyme; n=2; Coxiella burnet... 36 1.1
UniRef50_O66728 Cluster: Poly A polymerase; n=1; Aquifex aeolicu... 35 1.4
UniRef50_Q125I3 Cluster: Metal dependent phosphohydrolase; n=1; ... 35 1.4
UniRef50_A6FG51 Cluster: Putative tRNA nucleotidyltransferase; n... 35 1.4
UniRef50_A0YS97 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_A2FD21 Cluster: PolyA polymerase family protein; n=2; T... 35 1.4
UniRef50_UPI00015BD2D0 Cluster: UPI00015BD2D0 related cluster; n... 35 1.9
UniRef50_Q72BI3 Cluster: PolyA polymerase family protein; n=3; D... 35 1.9
UniRef50_Q30ZL6 Cluster: TRNA nucleotidyltransferase, putative; ... 35 1.9
UniRef50_Q1NUR4 Cluster: Polynucleotide adenylyltransferase regi... 35 1.9
UniRef50_A0Q0F2 Cluster: PolyA polymerase family protein, putati... 35 1.9
UniRef50_Q8SS78 Cluster: TRNA ADENILYL TRANSFERASE; n=1; Encepha... 35 1.9
UniRef50_A1C7Z8 Cluster: Poly(A) polymerase; n=8; Eurotiomycetid... 28 2.2
UniRef50_Q39TB4 Cluster: Polynucleotide adenylyltransferase regi... 34 2.5
UniRef50_Q9RVP2 Cluster: TRNA nucleotidyltransferase, putative; ... 34 3.3
UniRef50_Q9KBJ7 Cluster: Intracellular alkaline serine protease;... 34 3.3
UniRef50_A7GXZ4 Cluster: PolyA polymerase family protein; n=2; C... 34 3.3
UniRef50_A6EHJ3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A4J0V4 Cluster: Metal dependent phosphohydrolase; n=1; ... 34 3.3
UniRef50_A1IDZ7 Cluster: PolyA polymerase family protein; n=1; C... 34 3.3
UniRef50_A0RPP8 Cluster: PolyA polymerase family protein; n=1; C... 34 3.3
UniRef50_A0LG26 Cluster: Polynucleotide adenylyltransferase regi... 34 3.3
UniRef50_Q00SN8 Cluster: Polynucleotide adenylyltransferase fami... 34 3.3
UniRef50_Q22BM8 Cluster: HAD-superfamily hydrolase, subfamily II... 34 3.3
UniRef50_A4RHL3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q7U391 Cluster: CCA-adding enzyme; n=4; Bordetella|Rep:... 34 3.3
UniRef50_Q1VKP5 Cluster: Poly(A) polymerase; n=1; Psychroflexus ... 33 4.4
UniRef50_Q1JYT1 Cluster: Polynucleotide adenylyltransferase regi... 33 5.8
UniRef50_A7AY03 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q9Y7U9 Cluster: ATP(CTP) tRNA nucleotidyltransferase; n... 33 5.8
UniRef50_Q5V3G1 Cluster: Cell surface glycoprotein related prote... 33 5.8
UniRef50_UPI00003837A2 Cluster: hypothetical protein Magn0300603... 33 7.7
UniRef50_Q6AJ41 Cluster: Related to poly(A) polymerase; n=1; Des... 33 7.7
UniRef50_Q1AYV6 Cluster: SMC protein-like protein; n=1; Rubrobac... 33 7.7
UniRef50_Q180L3 Cluster: Putative uncharacterized protein; n=3; ... 33 7.7
UniRef50_Q0G191 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q9NYW7 Cluster: Taste receptor type 2 member 1; n=24; E... 33 7.7
>UniRef50_UPI0000D568E8 Cluster: PREDICTED: similar to CG2100-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG2100-PA - Tribolium castaneum
Length = 405
Score = 235 bits (575), Expect = 7e-61
Identities = 110/147 (74%), Positives = 127/147 (86%)
Frame = +1
Query: 199 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 378
K RENP++ K+DSP+F S+FT+E+ L +F +Y +EIRIAGGAVRDLL GL P DLDFA
Sbjct: 5 KSRENPVIFKLDSPDFHSLFTDELKTLASMFKRYGYEIRIAGGAVRDLLSGLRPTDLDFA 64
Query: 379 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 558
TTATP +MKEMFTAE VRMIN+NGE+HGTIT RINDKENFEVTTLRID+VTDGR A+VQF
Sbjct: 65 TTATPVQMKEMFTAENVRMINMNGEKHGTITPRINDKENFEVTTLRIDVVTDGRRAEVQF 124
Query: 559 TKDWKLDANRRDLTINSMFLGFDGSVY 639
T DW LDA RRDLTINSMFL F+G+VY
Sbjct: 125 TTDWLLDALRRDLTINSMFLDFEGAVY 151
>UniRef50_Q9VNH2 Cluster: CG2100-PA; n=9; Coelomata|Rep: CG2100-PA -
Drosophila melanogaster (Fruit fly)
Length = 477
Score = 232 bits (567), Expect = 6e-60
Identities = 107/147 (72%), Positives = 125/147 (85%)
Frame = +1
Query: 199 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 378
+ R NP KV +PEFKSIFT E+ DL +F KY +E+RIAGGAVRD+LMG+ PKD+D A
Sbjct: 53 RMRTNPAFRKVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDILMGIPPKDIDLA 112
Query: 379 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 558
TTATP++MK+MF EEVRMIN NGE+HGTIT RINDKENFEVTTLRID+ TDGR A+V +
Sbjct: 113 TTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVMY 172
Query: 559 TKDWKLDANRRDLTINSMFLGFDGSVY 639
T DW+LDANRRDLTINSMFLGFDG+VY
Sbjct: 173 TTDWQLDANRRDLTINSMFLGFDGTVY 199
>UniRef50_UPI00015B5D79 Cluster: PREDICTED: similar to
ENSANGP00000010598; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000010598 - Nasonia
vitripennis
Length = 575
Score = 226 bits (553), Expect = 3e-58
Identities = 106/139 (76%), Positives = 120/139 (86%)
Frame = +1
Query: 223 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
+K+DSPEFKSIFT E+ L IF ++ +E+R+AGGAVRD+LMG PKDLDFATTATP EM
Sbjct: 8 MKLDSPEFKSIFTPELNTLSDIFKRHNYELRVAGGAVRDILMGKHPKDLDFATTATPVEM 67
Query: 403 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 582
KEMFT EEVRMIN NGE+HGTIT+RINDKENFEVTTLR+D+VTDGR ADV FT DW LDA
Sbjct: 68 KEMFTKEEVRMINCNGEKHGTITSRINDKENFEVTTLRVDVVTDGRHADVVFTTDWLLDA 127
Query: 583 NRRDLTINSMFLGFDGSVY 639
+RRDLTINSMFL DG VY
Sbjct: 128 SRRDLTINSMFLDLDGKVY 146
>UniRef50_UPI0000DB7A53 Cluster: PREDICTED: similar to CG2100-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG2100-PA
- Apis mellifera
Length = 395
Score = 217 bits (530), Expect = 2e-55
Identities = 100/145 (68%), Positives = 119/145 (82%)
Frame = +1
Query: 205 RENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATT 384
R NP++ K+D+P F SIFT E+ L ++F KY +E++IAGGAVRD+LM + P DLDFAT
Sbjct: 10 RSNPVIKKLDNPLFHSIFTPELNILAELFKKYNYELKIAGGAVRDILMDIKPLDLDFATD 69
Query: 385 ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTK 564
ATPEEMK MF E VRMIN GERHGTITARINDK+NFE+TTLRID TDGR+A ++FTK
Sbjct: 70 ATPEEMKTMFVKENVRMINNRGERHGTITARINDKQNFEITTLRIDTHTDGRYAKIKFTK 129
Query: 565 DWKLDANRRDLTINSMFLGFDGSVY 639
DWKLDA RRDLTINSMFL F+G +Y
Sbjct: 130 DWKLDALRRDLTINSMFLDFEGKIY 154
>UniRef50_UPI0000E49DF6 Cluster: PREDICTED: similar to Chain A,
Crystal Structure Of Human Cca-Adding Enzyme; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Chain A, Crystal Structure Of Human Cca-Adding Enzyme -
Strongylocentrotus purpuratus
Length = 407
Score = 215 bits (524), Expect = 1e-54
Identities = 95/139 (68%), Positives = 119/139 (85%)
Frame = +1
Query: 223 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
+K+DSPEF+ +FT E+ L ++F++Y++E+RIAGGAVRDLL P+D+DFAT ATP++M
Sbjct: 67 MKIDSPEFRGLFTPELKQLAELFERYQYELRIAGGAVRDLLTKKQPQDVDFATIATPDQM 126
Query: 403 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 582
KEMFT E +RMIN GE+HGTITARINDKENFE+TTLRID VTDGR A+V+FT DW+ DA
Sbjct: 127 KEMFTKEGIRMINAKGEKHGTITARINDKENFEITTLRIDRVTDGRHAEVEFTTDWRTDA 186
Query: 583 NRRDLTINSMFLGFDGSVY 639
RRDLTINSMFLG DG++Y
Sbjct: 187 ERRDLTINSMFLGLDGTLY 205
>UniRef50_Q96Q11 Cluster: tRNA-nucleotidyltransferase 1,
mitochondrial precursor; n=37; Deuterostomia|Rep:
tRNA-nucleotidyltransferase 1, mitochondrial precursor -
Homo sapiens (Human)
Length = 434
Score = 198 bits (484), Expect = 7e-50
Identities = 91/139 (65%), Positives = 117/139 (84%)
Frame = +1
Query: 223 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
+K+ SPEF+S+FTE + L ++F K HE+RIAGGAVRDLL G+ P+D+DFATTATP +M
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 403 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 582
KEMF + +RMIN GE+HGTITAR+++ ENFE+TTLRID+ TDGR A+V+FT DW+ DA
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHE-ENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 148
Query: 583 NRRDLTINSMFLGFDGSVY 639
RRDLTINSMFLGFDG+++
Sbjct: 149 ERRDLTINSMFLGFDGTLF 167
>UniRef50_Q5C3N6 Cluster: SJCHGC09232 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09232 protein - Schistosoma
japonicum (Blood fluke)
Length = 217
Score = 192 bits (469), Expect = 5e-48
Identities = 88/133 (66%), Positives = 107/133 (80%)
Frame = +1
Query: 229 VDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKE 408
+D F ++TEE I + KIF KY +RIAGGAVRD+L+G++P D+DFAT ATP +M E
Sbjct: 51 IDLTPFPELYTEENITVHKIFKKYGFNLRIAGGAVRDILLGVSPHDIDFATDATPSQMCE 110
Query: 409 MFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANR 588
MF+ E +RM+N NGE HGT+TARINDKENFEVTTLRID+VTDGR ++V FT DWKLDA R
Sbjct: 111 MFSKEGIRMLNRNGESHGTVTARINDKENFEVTTLRIDVVTDGRHSEVIFTNDWKLDAER 170
Query: 589 RDLTINSMFLGFD 627
RDLT+NSMFL D
Sbjct: 171 RDLTVNSMFLSVD 183
>UniRef50_Q93795 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 189 bits (460), Expect = 6e-47
Identities = 82/141 (58%), Positives = 114/141 (80%)
Frame = +1
Query: 214 PIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATP 393
P +K+D+ +F+++FT +++ L+ +F K +E+RIAGGAVRDLLM + P D+DFA+TATP
Sbjct: 6 PTTMKIDNEDFRTLFTPQLLKLRDLFAKRNYELRIAGGAVRDLLMNIRPADVDFASTATP 65
Query: 394 EEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWK 573
+MKEMF +++RM++ GE HGTIT RI+D ENFE+TTLR+D+V DGR A V++T DW+
Sbjct: 66 TQMKEMFEEDKIRMLHKRGEEHGTITCRIDDCENFEITTLRVDIVCDGRRAQVEYTTDWQ 125
Query: 574 LDANRRDLTINSMFLGFDGSV 636
LDANRRDLTINS+FL G+V
Sbjct: 126 LDANRRDLTINSLFLDLHGNV 146
>UniRef50_A7RRV1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 414
Score = 161 bits (390), Expect = 2e-38
Identities = 79/139 (56%), Positives = 101/139 (72%)
Frame = +1
Query: 223 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
I D+ FK+I T E++ L +F K+ +E+RI GGAVRDLLMG PKD+D T ATPE+M
Sbjct: 6 ILADTEGFKAIHTPELLRLSSVFTKHGYELRIVGGAVRDLLMGKLPKDIDLCTNATPEQM 65
Query: 403 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 582
+MF EE+R I G +HGT+TA IN K +FEVTTLRID+ TDGR A V+FT DW+LDA
Sbjct: 66 IKMFKDEEIRCIE-TGLQHGTLTAHIN-KTDFEVTTLRIDVETDGRHAKVKFTNDWQLDA 123
Query: 583 NRRDLTINSMFLGFDGSVY 639
RRDLT N+M + G++Y
Sbjct: 124 ERRDLTFNAMSVDLTGNLY 142
>UniRef50_Q40IR0 Cluster: Polynucleotide adenylyltransferase; n=8;
Rickettsiales|Rep: Polynucleotide adenylyltransferase -
Ehrlichia chaffeensis str. Sapulpa
Length = 401
Score = 105 bits (251), Expect = 1e-21
Identities = 53/129 (41%), Positives = 79/129 (61%)
Frame = +1
Query: 253 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 432
I E ++ + K++ +IR+ GG VRD L+ D+DFATT P + TA ++
Sbjct: 6 INNENILLIINAIKKFQGDIRLVGGCVRDSLLKRQTIDIDFATTLLPNQTINALTAAHIK 65
Query: 433 MINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
I G +HGTITA +N+ +E+TTLR D+ DGR A+V+FT +W+ DA+RRD T N++
Sbjct: 66 AIPT-GIKHGTITALVNNTA-YEITTLRSDISCDGRHAEVKFTNNWQQDASRRDFTFNAL 123
Query: 613 FLGFDGSVY 639
+ G VY
Sbjct: 124 YCDEKGIVY 132
>UniRef50_Q4FPG1 Cluster: Poly(A) Polymerase; n=3; Bacteria|Rep:
Poly(A) Polymerase - Pelagibacter ubique
Length = 424
Score = 100 bits (240), Expect = 3e-20
Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
Frame = +1
Query: 244 FKSIFTE-EVIDLKKIFDKYKH--EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
FK+I E EV + + Y EIR GG VR ++ D+D A P+E+ E
Sbjct: 22 FKNIKKETEVSKIFEAIHSYSSNSEIRYVGGCVRKIINKEAYDDIDLAVNLNPKEVCEAL 81
Query: 415 TAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRD 594
T ++++ +G HGTITA IND + FE+T+LR D+ TDGR A V+F+ WK DA+RRD
Sbjct: 82 TKKDIKYYE-SGIEHGTITALINDIK-FEITSLRKDIDTDGRHAKVEFSDSWKEDASRRD 139
Query: 595 LTINSMFLGFDGSVY 639
TINS++ +GS++
Sbjct: 140 FTINSIYADIEGSLF 154
>UniRef50_A3UG83 Cluster: Probable poly(A) polymerase; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Probable poly(A)
polymerase - Oceanicaulis alexandrii HTCC2633
Length = 408
Score = 99 bits (238), Expect = 4e-20
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 492
RI GGAVR+ L G +D+D AT TP+E + A ++ I G HGTITA I K
Sbjct: 32 RIVGGAVRNALQGAPVEDVDIATQLTPQETLDALKAAGIKAIPT-GLDHGTITAVIKGKP 90
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
FE+TTLR D+ TDGR A V FT DW +DA+RRD +N+++ DGS++
Sbjct: 91 -FEITTLRKDVSTDGRRAVVAFTTDWAIDASRRDFRLNAIYARRDGSLF 138
>UniRef50_A3VV21 Cluster: Possible poly(A) polymerase; n=1;
Parvularcula bermudensis HTCC2503|Rep: Possible poly(A)
polymerase - Parvularcula bermudensis HTCC2503
Length = 398
Score = 98.7 bits (235), Expect = 1e-19
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTP-----KDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 471
E R GG +RD L+G P D+D ATT PEE ++ +R+I G HGT+T
Sbjct: 26 EARFVGGCIRDSLLGQPPGAAGHTDIDIATTLLPEETLKLLGRHGIRVIPT-GLEHGTVT 84
Query: 472 ARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
A ++ FE+TTLR D+ TDGR A V FT+DW+ DA RRD TIN++ L +G +Y
Sbjct: 85 AVLSAVP-FEITTLRCDVATDGRHATVSFTEDWEKDAARRDFTINALSLDKEGRLY 139
>UniRef50_Q2GDC2 Cluster: PolyA polymerase family protein; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: PolyA
polymerase family protein - Neorickettsia sennetsu
(strain Miyayama)
Length = 392
Score = 97.9 bits (233), Expect = 2e-19
Identities = 52/128 (40%), Positives = 71/128 (55%)
Frame = +1
Query: 256 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRM 435
+TE++ L +I E R GG VRD L+G D+D ATT PEE +
Sbjct: 7 WTEDLRTLVQIIRNNGGEARFVGGCVRDQLLGRKISDIDLATTLKPEEAIRALKTNGLVT 66
Query: 436 INVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
I G +HGT T +N + E+TTLR D+ DGR A V FT WK DA RRD T N+M+
Sbjct: 67 IPT-GLKHGTFTVLVNSRP-IEITTLRQDLHCDGRHATVSFTDSWKEDAQRRDFTFNAMY 124
Query: 616 LGFDGSVY 639
+ +G+++
Sbjct: 125 IDIEGNIH 132
>UniRef50_Q89SD1 Cluster: Poly(A) polymerase; n=11;
Bradyrhizobiaceae|Rep: Poly(A) polymerase -
Bradyrhizobium japonicum
Length = 418
Score = 97.1 bits (231), Expect = 3e-19
Identities = 53/111 (47%), Positives = 67/111 (60%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E R+ GGAVR+ L+GL P D+D ATTA PEE+ A ++ + G HGT+T I D
Sbjct: 31 EARVVGGAVRNALLGLVPGDIDIATTARPEEVVRRAKAAGIKSVPT-GIDHGTVTLVI-D 88
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+EVTTLR D T GR A V F +DW DA RRD T+N + + G VY
Sbjct: 89 GHPYEVTTLREDTETFGRKAKVAFGRDWVKDAERRDFTMNGLSVDATGVVY 139
>UniRef50_Q8FZD7 Cluster: PolyA polymerase family protein; n=13;
Rhizobiales|Rep: PolyA polymerase family protein -
Brucella suis
Length = 423
Score = 95.9 bits (228), Expect = 7e-19
Identities = 51/110 (46%), Positives = 67/110 (60%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E R+ GGAVR+ L+G D+D ATT PEE + + + + G HGTIT +
Sbjct: 32 EARVVGGAVRNTLLGTGVSDVDLATTHLPEETVRLASEAGFKPVPT-GMEHGTITVVVQG 90
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
FEVTTLR D+ T+GR A V F DWK DA RRD TIN++++ DG+V
Sbjct: 91 YP-FEVTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYVTADGTV 139
>UniRef50_Q9AB26 Cluster: Poly A polymerase family protein; n=3;
Alphaproteobacteria|Rep: Poly A polymerase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 413
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/109 (45%), Positives = 65/109 (59%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 492
R GG VR+ LMG D+D ATT TP+ + + +R I G HGTITA ++
Sbjct: 30 RFVGGCVRNTLMGKPVDDIDIATTLTPDLVIDALEQAGLRAIPT-GVDHGTITA-VSGGR 87
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+E+TTLR D+ TDGR A V FT+DW DA RRD N+++ DG VY
Sbjct: 88 PYEITTLRKDVSTDGRRAVVAFTQDWNQDAERRDFRFNALYADTDGRVY 136
>UniRef50_Q1GRA3 Cluster: Polynucleotide adenylyltransferase region;
n=5; Sphingomonadales|Rep: Polynucleotide
adenylyltransferase region - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 398
Score = 93.5 bits (222), Expect = 4e-18
Identities = 47/102 (46%), Positives = 65/102 (63%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
+++ GGAVRD L+GL D+D AT P E+ A +++I G HGT+TA I
Sbjct: 29 VKVVGGAVRDTLLGLDVTDVDLATPLVPGEVTRRLEAAGIKVIPT-GIAHGTVTA-IASG 86
Query: 490 ENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
++ E+TTLR D+ TDGR A V F DW+ DA RRD TIN+++
Sbjct: 87 DHHEITTLRRDVATDGRRATVAFADDWREDAARRDFTINALY 128
>UniRef50_Q5FU27 Cluster: Poly(A) polymerase/t-RNA
nucleotidyltransferase; n=1; Gluconobacter oxydans|Rep:
Poly(A) polymerase/t-RNA nucleotidyltransferase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 396
Score = 92.7 bits (220), Expect = 7e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 492
R+ GG+VRDLL G+ DLD AT P++++ +R+I G HGT+TA + D
Sbjct: 28 RLVGGSVRDLLAGVAVHDLDLATPEPPDDVQRRLEQAGIRVIPT-GLAHGTVTALL-DSV 85
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFL 618
+E+TTLR D TDGR A V +T+DW DA RRD TIN+M L
Sbjct: 86 PYEITTLRRDEETDGRHAIVAWTQDWAEDAARRDFTINAMSL 127
>UniRef50_Q0BRM1 Cluster: Poly(A) polymerase; n=2;
Acetobacteraceae|Rep: Poly(A) polymerase - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 413
Score = 92.3 bits (219), Expect = 9e-18
Identities = 48/111 (43%), Positives = 67/111 (60%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
+ R GG VRD L G D+D A PE+ + + I G HGT+TA ++
Sbjct: 27 QARPVGGCVRDALAGRPVADIDLAVPMPPEQTLQRLEQAGLHSIPT-GLSHGTVTA-VSR 84
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
++FE+T+LR D+ TDGR A+V FT DW+ DA RRD TIN+M L DG+++
Sbjct: 85 GQHFEITSLRRDLATDGRHAEVSFTDDWQEDAARRDFTINAMSLSPDGTLH 135
>UniRef50_Q5NNN0 Cluster: TRNA nucleotidyltransferase; n=3;
Sphingomonadaceae|Rep: TRNA nucleotidyltransferase -
Zymomonas mobilis
Length = 406
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/102 (44%), Positives = 65/102 (63%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
IR GG+VRD L+GL D+D AT PE+ E+ + + I G +HGTITA + K
Sbjct: 29 IRFVGGSVRDTLLGLPVNDIDCATRHHPEKTMELIRSAGFKAIPT-GIQHGTITALLPTK 87
Query: 490 ENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
E+T+LR D+ TDGR A + ++ +W+ DA RRD TIN+++
Sbjct: 88 SPVEITSLRRDVSTDGRHATIAYSDNWEDDAQRRDFTINALY 129
>UniRef50_Q0ARR5 Cluster: Polynucleotide adenylyltransferase region;
n=1; Maricaulis maris MCS10|Rep: Polynucleotide
adenylyltransferase region - Maricaulis maris (strain
MCS10)
Length = 419
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/111 (42%), Positives = 68/111 (61%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E R GG VR+ L+G D+D AT P+++ A ++ + G+ HGTIT + D
Sbjct: 39 ESRFVGGCVRNALLGEPVADIDIATQLDPDQVIAAAKAAGLKPVPT-GKAHGTITV-VCD 96
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+ FEVT+LR D+ TDGR A V FT+DW DA RRD +N+++ DG+V+
Sbjct: 97 GQPFEVTSLRRDVATDGRRAVVSFTRDWAEDAKRRDFRLNALYADADGTVF 147
>UniRef50_A5NWU9 Cluster: Polynucleotide adenylyltransferase region;
n=3; Alphaproteobacteria|Rep: Polynucleotide
adenylyltransferase region - Methylobacterium sp. 4-46
Length = 418
Score = 90.6 bits (215), Expect = 3e-17
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Frame = +1
Query: 277 LKKIFDKYK---HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
L+K+ D E R+ GGAVRD L+G D+D ATT PE + A ++ +
Sbjct: 18 LRKVLDALALPGEETRLVGGAVRDALLGRAVADVDLATTLLPETVMRRAAASGLKPVPT- 76
Query: 448 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD 627
G HGT+T + E FEVTTLR D+ TDGR A V++ +D+ DA RRD TIN++F
Sbjct: 77 GISHGTVTV-VAHGEPFEVTTLREDVETDGRHAVVRYGRDFGRDAARRDFTINALFADAG 135
Query: 628 GSVY 639
G ++
Sbjct: 136 GHLH 139
>UniRef50_Q2VZL3 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase; n=3; Magnetospirillum|Rep: TRNA
nucleotidyltransferase/poly(A) polymerase -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 435
Score = 89.8 bits (213), Expect = 5e-17
Identities = 45/110 (40%), Positives = 68/110 (61%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
+R GG VRD L+ KD+D AT PE + + + I G HGT+TA I K
Sbjct: 42 VRFVGGCVRDALLKRPIKDVDIATPDPPERVLALLDDAGIHAIPT-GIDHGTVTAVIG-K 99
Query: 490 ENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
++E+TTLR+D+ + GR A +++T DW+ DA+RRD T+N++ +G+VY
Sbjct: 100 AHYEITTLRVDVESFGRHARIEYTDDWRADASRRDFTMNALSADPEGNVY 149
>UniRef50_Q0C5B7 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase family protein; n=1; Hyphomonas neptunium
ATCC 15444|Rep: TRNA nucleotidyltransferase/poly(A)
polymerase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 381
Score = 89.8 bits (213), Expect = 5e-17
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 492
R GG+VR+ L GL +D+D AT P+E A +R+I G HGT+TA
Sbjct: 13 RYVGGSVRNTLRGLKAEDVDIATQLLPQETAAALEAAGIRVIPT-GIEHGTVTAFYKGVP 71
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
E+TTLR D+ TDGR A V FT+DW DA RRD +N+++ G +G +Y
Sbjct: 72 -IEITTLRRDVETDGRRAVVAFTQDWAEDAARRDFRMNAIYAGAEGELY 119
>UniRef50_Q5P9P8 Cluster: Poly (A) polymerase; n=5;
Anaplasmataceae|Rep: Poly (A) polymerase - Anaplasma
marginale (strain St. Maries)
Length = 419
Score = 85.8 bits (203), Expect = 8e-16
Identities = 44/124 (35%), Positives = 69/124 (55%)
Frame = +1
Query: 268 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
V+ + + + + R+ GG VRD ++G D+D AT PE + + + ++ I
Sbjct: 11 VVRIVEAIEGARGNARLVGGCVRDSVLGRDTTDIDLATDLVPEMVIQALGSAGIKTIPT- 69
Query: 448 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD 627
G +HGT+TA + +E+TTLR D+ DGR A V FT W DA+RRD T N+++
Sbjct: 70 GIKHGTVTAVVAGIP-YEITTLRRDLECDGRHAAVAFTNSWMEDASRRDFTFNALYCDKS 128
Query: 628 GSVY 639
G +Y
Sbjct: 129 GKIY 132
>UniRef50_A7DHD6 Cluster: Polynucleotide adenylyltransferase region;
n=2; Methylobacterium extorquens PA1|Rep: Polynucleotide
adenylyltransferase region - Methylobacterium extorquens
PA1
Length = 424
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/111 (42%), Positives = 64/111 (57%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E R+ GG VRD L+G D+D ATT PE + ++ + G HGT+T +
Sbjct: 41 ETRLVGGCVRDALLGTIVADIDLATTLRPEAVMACARKAGIKAVGT-GIEHGTVTLVVGG 99
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
E EVTTLR D+ TDGR A V+F +D+ DA RRD TIN++ L G ++
Sbjct: 100 -EPHEVTTLREDVETDGRHAVVRFGRDFVRDAERRDFTINALSLDAGGRLH 149
>UniRef50_A0NYQ1 Cluster: Poly(A) polymerase; n=1; Stappia aggregata
IAM 12614|Rep: Poly(A) polymerase - Stappia aggregata
IAM 12614
Length = 414
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/111 (42%), Positives = 69/111 (62%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E R+ GGAVR+ L+G D+D ATTA+PE + + A ++ I G HGTIT ++
Sbjct: 33 EARVVGGAVRNTLLGHPVPDVDIATTASPEMVMKRARAAGLKPIGT-GIDHGTITV-VSS 90
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+EVTTLR D+ T GR A V F ++W DA RRD T+N++++ G ++
Sbjct: 91 GYPYEVTTLREDVETFGRQARVVFGRNWTRDAERRDFTLNALYVDRHGRLH 141
>UniRef50_Q6G2K6 Cluster: Poly(A) polymerase; n=6; Rhizobiales|Rep:
Poly(A) polymerase - Bartonella henselae (Rochalimaea
henselae)
Length = 417
Score = 84.6 bits (200), Expect = 2e-15
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV-NGERHGTITARIN 483
E RI GGAVR+ L+ D+D ATT P+++ + EE + G GT+T ++
Sbjct: 31 EARIVGGAVRNQLLEQPISDVDIATTCLPQQI--IVRVEEAGFKAIPTGIAFGTVTV-VS 87
Query: 484 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
++EVTTLR D+ TDGR A V F +DW+ DA RRD T+N+++ G++Y
Sbjct: 88 QSCSYEVTTLRSDIETDGRHAKVAFGRDWQKDAERRDFTMNALYCDAAGNLY 139
>UniRef50_A5CCR6 Cluster: PolyA polymerase; n=1; Orientia
tsutsugamushi Boryong|Rep: PolyA polymerase - Orientia
tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 402
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/108 (38%), Positives = 67/108 (62%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 492
RI GG++R++++G D+D AT PE++ ++ ++ G + GT+TA I +E
Sbjct: 30 RIIGGSIRNIILGQPVNDIDIATPLLPEQVMDLLKLNNIKCY-ATGIKFGTVTAVIK-RE 87
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
FE+TTLR D+ GR A V+F+ D+ DA RRD TIN++ F+ S+
Sbjct: 88 KFEITTLRQDVQCYGRHAKVEFSNDYFEDARRRDFTINALSYSFEQSL 135
>UniRef50_Q2RXH4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Polynucleotide adenylyltransferase region -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 525
Score = 83.8 bits (198), Expect = 3e-15
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMG---LTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITAR 477
E R GG VRD L+ L P D+D ATT PE + + A ++ + G HGT+T
Sbjct: 95 EARFVGGCVRDSLLRRDPLRPMDIDIATTERPERVIALIEAAGLKAVPT-GLAHGTLTVV 153
Query: 478 INDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
K FEVTTLR D DGR A+V FT ++ DA RRD TIN++ +G V+
Sbjct: 154 AGGKP-FEVTTLRRDTACDGRHAEVAFTTSFREDAGRRDFTINALSADREGRVF 206
>UniRef50_Q0FDP1 Cluster: Poly A polymerase family protein; n=1;
alpha proteobacterium HTCC2255|Rep: Poly A polymerase
family protein - alpha proteobacterium HTCC2255
Length = 383
Score = 83.8 bits (198), Expect = 3e-15
Identities = 51/138 (36%), Positives = 81/138 (58%)
Frame = +1
Query: 223 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
+K+++ KS T +V+D K + +++ GG VR+ L+GL D+D +T A P+E+
Sbjct: 1 MKINNRWLKSKDTIKVMDALKCRN---NQVLFVGGCVRNSLLGLPITDIDISTNARPDEI 57
Query: 403 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 582
+ ++ I G HGTIT N+K FEVT+ R D+ TDGR A V ++ + DA
Sbjct: 58 INLAKKAGLKSIPT-GINHGTITIISNNKA-FEVTSFRKDIKTDGRHATVAYSDKIEDDA 115
Query: 583 NRRDLTINSMFLGFDGSV 636
RRD TIN++++ DG +
Sbjct: 116 ERRDFTINAIYMTTDGII 133
>UniRef50_Q1GCJ3 Cluster: Polynucleotide adenylyltransferase region;
n=23; Rhodobacterales|Rep: Polynucleotide
adenylyltransferase region - Silicibacter sp. (strain
TM1040)
Length = 386
Score = 82.2 bits (194), Expect = 1e-14
Identities = 50/138 (36%), Positives = 74/138 (53%)
Frame = +1
Query: 223 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
+K+D P S T ++ D EI GG VR+ L+G DLD +T+ATP+ +
Sbjct: 1 MKIDEPWLHSPATRKLCDA---LTSAGAEIYFVGGCVRNALLGEPVSDLDLSTSATPQYV 57
Query: 403 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 582
E +++I G HGT+T + D + FE+TT R D+ TDGR A V F + DA
Sbjct: 58 TEAAEQAGLKVIPT-GIEHGTVTVVV-DGDPFEITTFRRDVATDGRRAVVAFATEILEDA 115
Query: 583 NRRDLTINSMFLGFDGSV 636
RRD T+N+++ G +
Sbjct: 116 RRRDFTMNALYARPTGEI 133
>UniRef50_Q660G6 Cluster: Polynucleotide adenylyltransferase; n=3;
Borrelia burgdorferi group|Rep: Polynucleotide
adenylyltransferase - Borrelia garinii
Length = 410
Score = 81.4 bits (192), Expect = 2e-14
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
+++I + KIF K +E + GGA+RDLL+ P D DFAT ATPEE+ +F ++
Sbjct: 8 KDIIKIGKIFKKNNYEFYLVGGALRDLLLNKQPCDFDFATNATPEEIITLF-PNNIK--- 63
Query: 442 VNGERHGTITARINDKENFEVTTLRIDMVTDGRFA--DVQFTKDWKLDANRRDLTINSM 612
G +HGTI N K+ FE+TT RI+ + V++TK+ D RRD TIN++
Sbjct: 64 -TGIKHGTIGIIFN-KKIFEITTYRIEKEYENNRTPKQVEYTKNLIKDLERRDFTINAI 120
>UniRef50_Q1VJ65 Cluster: Polynucleotide adenylyl transferase; n=1;
Psychroflexus torquis ATCC 700755|Rep: Polynucleotide
adenylyl transferase - Psychroflexus torquis ATCC 700755
Length = 258
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/147 (31%), Positives = 78/147 (53%)
Frame = +1
Query: 199 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 378
K +N +V + F+ I +++ + + + K + I GGA+RD L+ D+DF
Sbjct: 8 KLMQNTLVKSISL--FEQIKNDDIFKIFDLAENNKFNLWIVGGALRDFLIDKNINDIDFV 65
Query: 379 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 558
P E+ E+ + I+ G I ++N+KE + +T+LR D DGR+ V++
Sbjct: 66 YDINPAELVEILKTNNLNFISTY-INFGVIIIKLNNKE-YTLTSLREDFKQDGRYTKVRY 123
Query: 559 TKDWKLDANRRDLTINSMFLGFDGSVY 639
K K D+ RRDLTINS+++ + VY
Sbjct: 124 IKSIKKDSLRRDLTINSLYMDNNQKVY 150
>UniRef50_O25357 Cluster: Poly(A) polymerase; n=4; Helicobacter|Rep:
Poly(A) polymerase - Helicobacter pylori (Campylobacter
pylori)
Length = 402
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
E + +L I++K HE+ + GG VRD LMG+TPKD D + A E KE+ R++
Sbjct: 6 EGLKELFDIYEKSSHELYLVGGCVRDYLMGITPKDYDLTSNALVNESKELLLKRHFRVLE 65
Query: 442 VNGERHGTITARINDKENFEVTTLRIDM--VTDGRFADVQFTKDWKLDANRRDLTINSM 612
G +HGTITA + + +++E+TT RI+ + + ++ F+ D RRD ++N++
Sbjct: 66 -TGIKHGTITA-LKNHQSYEITTFRIEKGHIKHRKPKELVFSVHLTDDLKRRDFSMNAI 122
>UniRef50_A0NJB1 Cluster: Polynucleotide adenylyltransferase; n=2;
Oenococcus oeni|Rep: Polynucleotide adenylyltransferase
- Oenococcus oeni ATCC BAA-1163
Length = 399
Score = 78.2 bits (184), Expect = 2e-13
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
+E I + + + ++ GG+VRD ++ D+D T A P EMK +F + N
Sbjct: 10 KEAIPVLNCLENHGYQAYFVGGSVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----N 65
Query: 442 VNGERHGTITARINDKENFEVTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSMF 615
GE+HGT +N K+ +EVTT RID D R +V FTK+ K D +RRD TIN+
Sbjct: 66 YAGEKHGTDLVFLNGKK-YEVTTFRIDGKYLDNRHPKNVSFTKNLKEDLSRRDFTINAFA 124
Query: 616 LGFDGSVY 639
+ +G ++
Sbjct: 125 MNQEGELF 132
>UniRef50_Q1EZ98 Cluster: HDIG; n=1; Clostridium oremlandii
OhILAs|Rep: HDIG - Clostridium oremlandii OhILAs
Length = 450
Score = 77.4 bits (182), Expect = 3e-13
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
E+++D IF +E I GG VRD ++ +P+D D T TPE+M E+ + +V
Sbjct: 16 EQILD---IFSINGYEGYIVGGCVRDSILNKSPQDWDICTNCTPEKMMELLSGFKV---I 69
Query: 442 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSM 612
G +HGT+T I D +EVTT R+D DGR + VQFT + D RRD TIN+M
Sbjct: 70 PTGLKHGTVTVVI-DHVGYEVTTYRVDGDYRDGRHPEKVQFTASLREDLKRRDFTINAM 127
>UniRef50_A6DP87 Cluster: Putative poly(A) polymerase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative poly(A)
polymerase - Lentisphaera araneosa HTCC2155
Length = 385
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = +1
Query: 274 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 453
D +IF K +I I GGAVRD L+G+ D+D A+ P + K++ + + + G
Sbjct: 4 DFCEIFGK---DIYIVGGAVRDRLLGIDVVDIDIASAIHPYDFKDLSKSLGYKTFDT-GI 59
Query: 454 RHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFL 618
HGT+T I+ K +E TT R D+ DGR A+V F+K + D +RRD TIN++ L
Sbjct: 60 EHGTVTVLIDGKP-YEHTTFRTDVSCDGRNANVSFSKTIEEDLSRRDFTINAIAL 113
>UniRef50_A6NVT9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 392
Score = 76.6 bits (180), Expect = 5e-13
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +1
Query: 322 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 501
GG VRDLL+G TP D D T+A PEE+ +F R + G RHGT+T + + E
Sbjct: 31 GGCVRDLLLGRTPGDWDVTTSAMPEEVIALFD----RTV-PTGIRHGTVTV-LTEDGGVE 84
Query: 502 VTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSV 636
VTT R + DGR D V F D D RRD TIN+M LG DG+V
Sbjct: 85 VTTFRAESGYADGRHPDAVTFGGDLTGDLTRRDFTINAMALGPDGAV 131
>UniRef50_A4EGY8 Cluster: PolyA polymerase family protein; n=2;
Rhodobacteraceae|Rep: PolyA polymerase family protein -
Roseobacter sp. CCS2
Length = 378
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/105 (39%), Positives = 63/105 (60%)
Frame = +1
Query: 322 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 501
GG VR+ L+ DLD +T A PE + ++ A +++ I G HGT+T ++D FE
Sbjct: 32 GGCVRNELLDEPVADLDLSTDALPEFVMKLAKAAKIKAIPT-GIDHGTVTLIVDDVP-FE 89
Query: 502 VTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
+TT R D+ TDGR A V ++ + DA RRD T+N+++ DG +
Sbjct: 90 ITTFRRDVATDGRRATVAYSDNMTDDARRRDFTMNALYADADGQI 134
>UniRef50_P42977 Cluster: CCA-adding enzyme; n=3; Bacillus|Rep:
CCA-adding enzyme - Bacillus subtilis
Length = 397
Score = 75.8 bits (178), Expect = 8e-13
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +1
Query: 265 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 444
+ + + +I + H+ GGAVRD M T D+D AT A P++++ +F R ++V
Sbjct: 7 KALPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPDQVERLFQ----RTVDV 62
Query: 445 NGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSMFL 618
G+ HGTI D E +EVTT R D V R ++VQF + D RRDLTIN+M +
Sbjct: 63 -GKEHGTIIVLWED-ETYEVTTFRTESDYVDFRRPSEVQFISSLEEDLKRRDLTINAMAM 120
Query: 619 GFDGSV 636
DG V
Sbjct: 121 TADGKV 126
>UniRef50_Q92JQ2 Cluster: Poly(A) polymerase [EC:2.7.7.19]; n=14;
Rickettsia|Rep: Poly(A) polymerase [EC:2.7.7.19] -
Rickettsia conorii
Length = 436
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +1
Query: 364 DLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRF 543
D+D AT TP E+ + + +++ I G + GTITA +N+ E FE+TTLR D+ +GR
Sbjct: 95 DIDIATNLTPSEVTNILSGAKIKTIPT-GLKFGTITATLNN-EKFEITTLRKDIECNGRH 152
Query: 544 ADVQFTKDWKLDANRRDLTINSM-FLGFDGSVY 639
A V FT D+ DA RRD TIN++ + F +Y
Sbjct: 153 AKVIFTNDFAEDAARRDFTINALSYCPFKNEIY 185
>UniRef50_Q99U32 Cluster: CCA-adding enzyme; n=16;
Staphylococcus|Rep: CCA-adding enzyme - Staphylococcus
aureus (strain Mu50 / ATCC 700699)
Length = 400
Score = 74.1 bits (174), Expect = 3e-12
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +1
Query: 247 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 426
KS+F + L++I D E GG+VRD +MG D+D T+ATP+E++ +F+
Sbjct: 3 KSLFEQARPILEQIQDN-GFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFS--- 58
Query: 427 VRMINVNGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLT 600
I V G+ HGTI ND EN+EVTT R D V R + V F +D D RRD T
Sbjct: 59 -HTIPV-GKEHGTINVVFND-ENYEVTTFRAEEDYVDHRRPSGVTFVRDLYEDLQRRDFT 115
Query: 601 INSM 612
+N++
Sbjct: 116 MNAI 119
>UniRef50_Q3XW94 Cluster: Polynucleotide adenylyltransferase; n=1;
Enterococcus faecium DO|Rep: Polynucleotide
adenylyltransferase - Enterococcus faecium DO
Length = 249
Score = 73.3 bits (172), Expect = 4e-12
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
++ I + K + +E GG+VRD+L+ D+D AT+A PEE+K++F + I+
Sbjct: 11 QKAIPVLKKLENAGYEAYFVGGSVRDILLNQPIHDVDIATSAFPEEIKQLFP----KTID 66
Query: 442 VNGERHGTITARINDKENFEVTTLRIDMV-TDGRFAD-VQFTKDWKLDANRRDLTINSMF 615
+ G HGT+ ND E +E+TT R + D R D V+F + D RRD TIN+
Sbjct: 67 I-GIEHGTVLVLEND-EQYEITTFRTESTYQDYRRPDHVEFVRSLSEDLKRRDFTINAFA 124
Query: 616 LGFDGSV 636
L DG +
Sbjct: 125 LKEDGEI 131
>UniRef50_A4XLP3 Cluster: TRNA adenylyltransferase; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: TRNA
adenylyltransferase - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 394
Score = 73.3 bits (172), Expect = 4e-12
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
+E + + K +++ + + GG +RD L+G TP+D D AT A PE++ ++F
Sbjct: 6 DEPLQVIKRLNQHNFKAYLVGGCLRDYLLGTTPQDFDIATDAKPEDVMKLF-----EKTI 60
Query: 442 VNGERHGTITARINDKENFEVTTLRIDM-VTDGRFADVQFTKDWKLDANRRDLTINSM 612
G +HGT+T IN+ + EVTT RI+ + R+ V+FT D RRD TIN++
Sbjct: 61 PTGIKHGTVTVIINNVK-IEVTTFRIEKEYQNHRWPTVEFTDSLYEDLKRRDFTINAL 117
>UniRef50_Q895R6 Cluster: Poly(A) polymerase; n=9; Clostridium|Rep:
Poly(A) polymerase - Clostridium tetani
Length = 451
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
+EV + I +++ +E GG +RD L+ P D D T A E++ ++F + + ++
Sbjct: 12 KEVKYIIDILEEHGYEAYAVGGCIRDSLLNRIPHDWDITTDAKGEQVIKIFKSLDFNVVK 71
Query: 442 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSM 612
G R+GT+T IN +E+TT RID DGR + V+FT + K D +RRD T+N+M
Sbjct: 72 -TGIRYGTVTLIIN-SIGYEITTYRIDGNYLDGRHPEKVEFTNNLKEDLSRRDFTVNAM 128
>UniRef50_Q0TV45 Cluster: PolyA polymerase family protein; n=3;
Clostridium perfringens|Rep: PolyA polymerase family
protein - Clostridium perfringens (strain ATCC 13124 /
NCTC 8237 / Type A)
Length = 424
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Frame = +1
Query: 289 FDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTI 468
F+ E I GG VRD L+ P+D D T A PE+++E+F + I G +HGT+
Sbjct: 16 FNSNGFEAFIVGGCVRDSLLNKKPQDYDITTNAFPEKIEELFD----KTI-PTGIKHGTV 70
Query: 469 TARINDKENFEVTTLRID--MVTDGRFADVQFTKDWKLDANRRDLTINSM----FLGF 624
T I DK +EVTT R+D + + + DV+F + + D +RRD TIN+M +LGF
Sbjct: 71 TVLI-DKNPYEVTTYRVDGEYLNNRKPKDVKFVSNIEEDLSRRDFTINAMAYSPYLGF 127
>UniRef50_Q1VLB3 Cluster: PolyA polymerase family protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: PolyA polymerase
family protein - Psychroflexus torquis ATCC 700755
Length = 248
Score = 72.5 bits (170), Expect = 8e-12
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Frame = +1
Query: 307 EIRIAGGAVRDLLM----GLT---PKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGT 465
E R GG VR+ L+ G++ +DLD A + + + +R+++ G HGT
Sbjct: 30 EARFVGGVVRNGLLARDKGISFDAEQDLDIAVSLPITCFADAARQQGLRVLDT-GLAHGT 88
Query: 466 ITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+T + ++ EVT LR D+ TDGR A VQ T DW +DA RRD TIN+++L G+V+
Sbjct: 89 VTV-LAGSQSAEVTQLRSDISTDGRHAKVQPTTDWHIDAQRRDFTINALYLDAHGAVH 145
>UniRef50_Q1FP87 Cluster: TRNA adenylyltransferase; n=4;
Clostridiales|Rep: TRNA adenylyltransferase -
Clostridium phytofermentans ISDg
Length = 459
Score = 72.5 bits (170), Expect = 8e-12
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 322 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 501
GG VRD L+G P D D T+A P E+K++F+ R I+ G +HGT+T + KE FE
Sbjct: 27 GGCVRDSLLGRIPGDWDITTSANPCEVKQIFS----RTID-TGIKHGTVTVMLG-KEGFE 80
Query: 502 VTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSM 612
VTT R+D D R V++TK+ D RRD TIN+M
Sbjct: 81 VTTYRLDGEYEDNRHPKQVEYTKNLIEDLKRRDFTINAM 119
>UniRef50_Q8F4S0 Cluster: Poly(A) polymerase; n=4; Leptospira|Rep:
Poly(A) polymerase - Leptospira interrogans
Length = 432
Score = 71.3 bits (167), Expect = 2e-11
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Frame = +1
Query: 253 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 432
IF E+++ + +I K E + GG+VRDL + PK+ D T+ PE++ +F R
Sbjct: 16 IFLEDILHITQIIRKEGGECYLVGGSVRDLALSKIPKEFDLTTSLLPEKILSLFK----R 71
Query: 433 MINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTIN 606
I G +HGT+T I D+ +E+TT R D DGR + V+F D RRD T+N
Sbjct: 72 TI-PTGIKHGTVTVLIQDRA-YEITTFRKDADYLDGRRPEIVEFGVSLSEDLKRRDFTMN 129
Query: 607 SMFLGFD 627
+ L FD
Sbjct: 130 A--LAFD 134
>UniRef50_A4A0Y5 Cluster: Poly A polymerase; n=1; Blastopirellula
marina DSM 3645|Rep: Poly A polymerase - Blastopirellula
marina DSM 3645
Length = 426
Score = 71.3 bits (167), Expect = 2e-11
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 271 IDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 450
+++ + + H+ AGG VRD+L+G P+D D AT A PE ++++F + I G
Sbjct: 14 LEVVRTLKTHGHQALWAGGCVRDMLLGRDPQDFDVATDAPPERVRQIFGEKRTLAI---G 70
Query: 451 ERHGTITARINDKE-NFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLG 621
G IT + K EV T R D+ +DGR D V+FT + DA RRD TIN +F
Sbjct: 71 ASFGVITVQGGKKRGQIEVATFRQDVGYSDGRRPDEVRFTSA-EEDAKRRDFTINGIFYD 129
Query: 622 FDGS 633
D S
Sbjct: 130 PDAS 133
>UniRef50_Q5FKF0 Cluster: CCA-adding enzyme; n=5; Lactobacillus|Rep:
CCA-adding enzyme - Lactobacillus acidophilus
Length = 399
Score = 71.3 bits (167), Expect = 2e-11
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +1
Query: 220 VIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEE 399
+IK+D+ +IFT+ + L+++ D E GG+VRD+L+ D+D T+A PEE
Sbjct: 1 MIKIDN--LPNIFTKAMPVLQRLEDA-GFEAYFVGGSVRDVLLDRHVHDIDITTSAYPEE 57
Query: 400 MKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWK 573
+KE+F + I+ G +HGT+T + + E++E+TT R + D R D V F ++
Sbjct: 58 VKELFE----KSID-TGIKHGTVTV-LYEGESYEITTFRTESGYQDFRRPDHVTFVQNLD 111
Query: 574 LDANRRDLTINSMFLGFDGSV 636
D RRD TIN++ + G +
Sbjct: 112 EDLKRRDFTINALAMDIRGQI 132
>UniRef50_A5Z8C9 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Eubacterium ventriosum ATCC 27560
Length = 457
Score = 70.5 bits (165), Expect = 3e-11
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 EFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTA 420
EFK V + + + +E GG VRD ++ P+D D T+A PE++KE+F
Sbjct: 9 EFKINIPGSVKLIIDVLENNGYEAFAVGGCVRDTILDREPQDWDITTSALPEQVKELFN- 67
Query: 421 EEVRMINVNGERHGTITARINDKENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRD 594
R ++ G +HGT+T I +EVTT RID D R + V+FT + D RRD
Sbjct: 68 ---RTLD-TGIQHGTVTVMIK-HVGYEVTTYRIDGEYNDSRHPESVEFTSNLIEDLKRRD 122
Query: 595 LTINSM 612
TIN+M
Sbjct: 123 FTINAM 128
>UniRef50_Q8RJX5 Cluster: Polynucleotide adenyltransferase; n=4;
Cystobacterineae|Rep: Polynucleotide adenyltransferase -
Stigmatella aurantiaca
Length = 423
Score = 68.5 bits (160), Expect = 1e-10
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 268 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
++D+ + + + + GG VRD+L G+ PKD D A++A P+E++ F + +
Sbjct: 15 ILDVLQRLRELGFAVFLVGGCVRDILRGVAPKDFDVASSALPQEVQGAF-----KKVIPT 69
Query: 448 GERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
G +HGT+T I + EVTT R D + R + V F +D D +RRD TIN+M
Sbjct: 70 GIQHGTVTVVIGG-NHVEVTTFRSEGDYLDGRRPSSVTFERDITQDLSRRDFTINAM 125
>UniRef50_Q5KXX0 Cluster: CCA-adding enzyme; n=4; Bacillaceae|Rep:
CCA-adding enzyme - Geobacillus kaustophilus
Length = 404
Score = 68.5 bits (160), Expect = 1e-10
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
E+ + + + ++ +E GGAVRDLL+G D+D AT+A PEE+ +F + I+
Sbjct: 6 EQALGIIRQLKRHGYEAYFVGGAVRDLLIGRAIGDVDIATSALPEEVMRLFP----KTID 61
Query: 442 VNGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
V G +HGT+ +++ +EVTT R D R V F + + D RRD T+N++
Sbjct: 62 V-GSKHGTVVV-VHEGTAYEVTTFRTDGDYEDHRRPESVTFVRSLEEDLKRRDFTMNAIA 119
Query: 616 LGFDGSV 636
+ G++
Sbjct: 120 MDERGTI 126
>UniRef50_A6CRX0 Cluster: tRNA nucleotidyltransferase; n=1; Bacillus
sp. SG-1|Rep: tRNA nucleotidyltransferase - Bacillus sp.
SG-1
Length = 395
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 250 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 429
++F + + L+K+ ++ ++ GGAVRDLL+ D+D AT+A P+E+K +F
Sbjct: 6 TLFKQALPVLEKL-EEAGYQAYFVGGAVRDLLLNRPTNDIDIATSALPQEVKGVFP---- 60
Query: 430 RMINVNGERHGTITARINDKENFEVTTLRI-DMVTDGRFAD-VQFTKDWKLDANRRDLTI 603
+ I+V G HGT+ N+ +E+TT R + D R + V F K K D RRD TI
Sbjct: 61 KTIDV-GIEHGTVVVIYNETP-YEITTFRSEEEYKDHRRPESVTFIKSLKEDLQRRDFTI 118
Query: 604 NSMFLGFDGSVY 639
N++ + G+++
Sbjct: 119 NAIAMDRSGTIH 130
>UniRef50_A3IG30 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
sp. B14905|Rep: TRNA nucleotidyltransferase - Bacillus
sp. B14905
Length = 392
Score = 66.9 bits (156), Expect = 4e-10
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E I GGAVRD L+ D+D AT A PEE+K +F R +++ G +HGT+ I
Sbjct: 23 EAVIVGGAVRDALLNRPAHDVDVATNALPEEVKTVFQ----RTVDI-GIQHGTVLV-IVP 76
Query: 487 KENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGS 633
EVTT R D TD R D VQF + + D RRD T+N++ + DGS
Sbjct: 77 AGPVEVTTYRTDGEYTDHRRPDKVQFVRSLQDDLQRRDFTMNAIAMRRDGS 127
>UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus
iheyensis|Rep: CCA-adding enzyme - Oceanobacillus
iheyensis
Length = 400
Score = 66.1 bits (154), Expect = 7e-10
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
+E GG VRDLL+ D+D AT+ATP E+ +F ++I V G HGT+ R +
Sbjct: 21 YEGYFVGGCVRDLLLQKDIHDIDIATSATPNEVMHLFK----KVIPV-GIEHGTVIVR-H 74
Query: 484 DKENFEVTTLRID-MVTDGRFA-DVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
E++EVTT R D TD R DV+F + D RRD TIN++ + G +
Sbjct: 75 GGESYEVTTYRQDGEYTDHRRPNDVRFVTNLAEDLRRRDFTINALAMDTSGQI 127
>UniRef50_Q2B3W5 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
sp. NRRL B-14911|Rep: TRNA nucleotidyltransferase -
Bacillus sp. NRRL B-14911
Length = 400
Score = 65.7 bits (153), Expect = 9e-10
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Frame = +1
Query: 253 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 432
+F + L+KI + +E GG+VRD L+G D+D AT+ATP E+K +F R
Sbjct: 8 VFLKAAPVLEKI-ETAGYEAYFVGGSVRDYLLGKDISDVDIATSATPMEIKGIFP----R 62
Query: 433 MINVNGERHGTITARINDKENFEVTTLR--IDMVTDGRFADVQFTKDWKLDANRRDLTIN 606
+V G HGT+ + D +++EVTT R D R + V F + D RRD +N
Sbjct: 63 TADV-GIEHGTVIV-LYDGDSYEVTTFRSESDYEDFRRPSKVDFIRSLDEDLKRRDFRMN 120
Query: 607 SMFLGFDGSV 636
SM + DG +
Sbjct: 121 SMAMSKDGRI 130
>UniRef50_A0Z581 Cluster: Poly(A) polymerase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Poly(A) polymerase -
marine gamma proteobacterium HTCC2080
Length = 417
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
I GGAVRDL++G PKD D AT ATPEE+K +F R + G R + R + +E
Sbjct: 29 IVGGAVRDLILGGKPKDFDVATNATPEEIKGLF-----RSARIIGRRFQIVHVR-DGREI 82
Query: 496 FEVTTLRIDMVTD--GRFADVQFTKDWKL----------DANRRDLTINSMF 615
EVTT R V++ G+ A Q K L DA RRDLTIN+M+
Sbjct: 83 IEVTTYRGPHVSEGSGKSASKQSDKGLLLRDNVYGTLAEDAARRDLTINAMY 134
>UniRef50_UPI0000E87F63 Cluster: poly(A) polymerase; n=1;
Methylophilales bacterium HTCC2181|Rep: poly(A)
polymerase - Methylophilales bacterium HTCC2181
Length = 411
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Frame = +1
Query: 259 TEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMI 438
++ I++ K+ K +E I GGA+RD+LM PKD D AT ATPE++K +F R
Sbjct: 28 SKHAIEIIKVLKKNNYEAYIVGGAIRDILMNKNPKDFDIATDATPEQIKLLF-----RRS 82
Query: 439 NVNGERHGTITARINDKENFEVTTLRI-----DMVTDGRFADVQFTKDWKLDANRRDLTI 603
+ G R + ++ + EV+T R +++ +G D ++ K DA RRD T
Sbjct: 83 RIIGRRFKLVHV-MDGRGIIEVSTFRAKPHNKEVMRNGVTKDNEY-GTLKEDAERRDFTC 140
Query: 604 NSMF 615
NS++
Sbjct: 141 NSIY 144
>UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Polynucleotide adenylyltransferase region - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 510
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E+ + GG VRD L G +++D AT A P E+K + M +V GER GTI A + D
Sbjct: 27 ELYLVGGYVRDALSGRRGEEVDAATDARPPEIKRLLRPHAGYMWDV-GERFGTIGAAV-D 84
Query: 487 KENFEVTTLRIDMVTDG-RFADVQFTKDWKLDANRRDLTINSM 612
EVTT R D +G R +V F + D RRD TIN++
Sbjct: 85 GYRVEVTTYRSDRYAEGDRHPEVSFGESLMGDLARRDFTINAV 127
>UniRef50_Q92AA3 Cluster: CCA-adding enzyme; n=11; Listeria|Rep:
CCA-adding enzyme - Listeria innocua
Length = 393
Score = 64.5 bits (150), Expect = 2e-09
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E GG+VRD L+ D+D AT+A PEE+KE+F + G HGT+T R N
Sbjct: 21 EAYFVGGSVRDYLLNRPISDVDIATSAFPEEVKEIF-----QSTYDTGIAHGTVTVREN- 74
Query: 487 KENFEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSM 612
KE +EVTT R + + R ++V F + + D RRD T+N++
Sbjct: 75 KECYEVTTFRTEGTYEDFRRPSEVTFIRSLEEDLLRRDFTMNAI 118
>UniRef50_Q81ST6 Cluster: CCA-adding enzyme; n=11; Bacillus cereus
group|Rep: CCA-adding enzyme - Bacillus anthracis
Length = 397
Score = 63.7 bits (148), Expect = 4e-09
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
HE GG+VRDL++ D+D AT+A PEE+ +F R + V G HGT+ +
Sbjct: 19 HEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMAIFP----RHVPV-GLEHGTVIV-VE 72
Query: 484 DKENFEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
+ E +EVTT R + + R + VQF + + D RRD T+N++ + +G +
Sbjct: 73 NGEPYEVTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAIAMTEEGEM 125
>UniRef50_Q7UWK0 Cluster: Poly A polymerase; n=1; Pirellula sp.|Rep:
Poly A polymerase - Rhodopirellula baltica
Length = 427
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/108 (40%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF-------TAEEVRMINVNGERHGTITA 474
+AGG VRD L+G PKD D AT ATPE ++E+F E +I V R
Sbjct: 40 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRNTLAFGESFGVIGVLPPRSAVTEE 99
Query: 475 RINDKENFEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
EV T R D +DGR D D + DA RRD TIN MF
Sbjct: 100 PSAKLMPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMF 147
>UniRef50_Q6MM27 Cluster: Poly A polymerase; n=1; Bdellovibrio
bacteriovorus|Rep: Poly A polymerase - Bdellovibrio
bacteriovorus
Length = 397
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+AGG VRD L+G+ DLD AT ATPE+++ +F+ + +NV G+ G + + + +
Sbjct: 30 LAGGCVRDALLGVQAHDLDLATNATPEKVESLFS----KTVNV-GKSFGVMRVLV-EGAD 83
Query: 496 FEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
EV T R D +DGR + + DA RRD T+N++F
Sbjct: 84 IEVATFRNDGTYSDGRRPENVVFSSPQEDAQRRDFTVNALF 124
>UniRef50_A6GIH1 Cluster: Polynucleotide adenylyltransferase region;
n=1; Plesiocystis pacifica SIR-1|Rep: Polynucleotide
adenylyltransferase region - Plesiocystis pacifica SIR-1
Length = 408
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT---ARIND 486
+ GGAVRD L+G D D A+ ATPEE+ E+F + I G HGT+T R D
Sbjct: 26 VVGGAVRDALLGRDGGDWDVASNATPEEVIELFP----KTI-PTGLEHGTVTVLSGRGED 80
Query: 487 KENFEVTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSM 612
+ E+TT R + DGR ++V+F +D D RRDLTIN++
Sbjct: 81 RHAVELTTFRGEGAYHDGRRPSEVRFLRDLTEDLARRDLTINAL 124
>UniRef50_Q73NW9 Cluster: PolyA polymerase family protein; n=1;
Treponema denticola|Rep: PolyA polymerase family protein
- Treponema denticola
Length = 448
Score = 62.9 bits (146), Expect = 6e-09
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Frame = +1
Query: 259 TEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMI 438
++++ ++ +F + GGAVRD +G KD D AT A P+E++ +F R
Sbjct: 6 SKKMSEIASVFFNAGFSAYLVGGAVRDWFLGKPCKDYDIATDAEPKEVQALF-----RKT 60
Query: 439 NVNGERHGTITARINDKENFEVTTLRIDM-VTDGRF-ADVQFTKDWKLDANRRDLTINSM 612
G HGT+T D E E TT R + +DGR V + + + D +RRD T+N++
Sbjct: 61 IPTGIAHGTVTILYKD-EKIECTTFRCEADYSDGRRPQSVNYVRSIEEDLSRRDFTMNAI 119
Query: 613 FLGF-DGSV 636
+ DGS+
Sbjct: 120 AVSLKDGSI 128
>UniRef50_A6DGQ3 Cluster: RNA-poly(A) polymerase; n=1; Lentisphaera
araneosa HTCC2155|Rep: RNA-poly(A) polymerase -
Lentisphaera araneosa HTCC2155
Length = 412
Score = 62.1 bits (144), Expect = 1e-08
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Frame = +1
Query: 238 PEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFT 417
PEF + + + HE + GGAVRDLL+G PKD D +T+ATPE++ F
Sbjct: 4 PEFNPRLDRGAVQIISRLREAGHETYLVGGAVRDLLVGENPKDFDISTSATPEQVSAFFG 63
Query: 418 AEEVRMIN-----VNGERHGTI--TARINDKENFEVTTLRIDMVTDGRFADVQFTKDW-- 570
+ R+I V+ GT+ A N + + R DG V W
Sbjct: 64 KRKARIIGRRFKIVHVYERGTLYEVATFRRTPNEKERSARPS--DDGEI--VWRDNVWGS 119
Query: 571 -KLDANRRDLTINSMFL 618
+ DANRRD T+N++FL
Sbjct: 120 PEEDANRRDFTVNALFL 136
>UniRef50_Q8DUL8 Cluster: CCA-adding enzyme; n=44;
Streptococcaceae|Rep: CCA-adding enzyme - Streptococcus
mutans
Length = 401
Score = 62.1 bits (144), Expect = 1e-08
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +1
Query: 250 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 429
S F E + L+KI E GG+VRD+L+G D+D A+++ PEE K++F
Sbjct: 8 SEFQEALPVLEKI-KAAGFEAYFVGGSVRDVLLGHPIHDVDIASSSYPEETKKIFP---- 62
Query: 430 RMINVNGERHGTITARINDKENFEVTTLRI-DMVTD-GRFADVQFTKDWKLDANRRDLTI 603
R +++ G HGT+ + + ++EVTT R D+ D R + V F + + D RRD TI
Sbjct: 63 RTVDI-GIEHGTVLV-LENGHDYEVTTFRTEDLYVDYRRPSQVSFVRSLEEDLKRRDFTI 120
Query: 604 NSMFL 618
N+ L
Sbjct: 121 NAFAL 125
>UniRef50_Q9JZY9 Cluster: PolyA polymerase; n=4; Neisseria|Rep:
PolyA polymerase - Neisseria meningitidis serogroup B
Length = 453
Score = 61.7 bits (143), Expect = 1e-08
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GGAVRDLL+G+ PKD D AT ATPE++ ++F R + G R I +N E
Sbjct: 57 VVGGAVRDLLLGIEPKDFDVATDATPEQVHKLF-----RRSRIIGRRF-QIVHVMNGAET 110
Query: 496 FEVTTLR----IDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
EVTT R + GR + DA RRD T N+++
Sbjct: 111 IEVTTFRGGAKVHQNARGRIMKDNTYGSIEEDAMRRDFTCNALY 154
>UniRef50_A6CGS1 Cluster: Metal dependent phosphohydrolase; n=1;
Planctomyces maris DSM 8797|Rep: Metal dependent
phosphohydrolase - Planctomyces maris DSM 8797
Length = 422
Score = 61.3 bits (142), Expect = 2e-08
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = +1
Query: 319 AGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE-N 495
AGG VRDLL+ PKD D AT A PEE++ +F + G G I R + + +
Sbjct: 27 AGGCVRDLLLQKEPKDYDVATNALPEEVRTLFGKRRTLAV---GASFGVIIVRGHQPDCD 83
Query: 496 FEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMF 615
E+ T R + DGR + V+FT + DA RRD TIN MF
Sbjct: 84 VEIATFRSEGPYLDGRRPEHVKFTTA-EEDAQRRDFTINGMF 124
>UniRef50_Q88W02 Cluster: CCA-adding enzyme; n=10;
Lactobacillales|Rep: CCA-adding enzyme - Lactobacillus
plantarum
Length = 407
Score = 61.3 bits (142), Expect = 2e-08
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
+E GG VRD ++G D+D AT+A P E+K++F R ++ G HGT+ ++
Sbjct: 25 YEAYFVGGCVRDTILGKPLHDVDIATSAFPAEVKQLFK----RTVD-TGIEHGTVMI-LD 78
Query: 484 DKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSV 636
+E TT R + D R D V F + K D RRD TIN++ + +G V
Sbjct: 79 HGNGYETTTFRTESGYQDFRRPDQVTFVRSLKEDLKRRDFTINALAMTANGEV 131
>UniRef50_Q1IUE8 Cluster: Metal dependent phosphohydrolase; n=2;
Acidobacteria|Rep: Metal dependent phosphohydrolase -
Acidobacteria bacterium (strain Ellin345)
Length = 454
Score = 60.9 bits (141), Expect = 3e-08
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Frame = +1
Query: 271 IDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE-------EV 429
I++ K + H+ + GG VRDLL+G P D D AT A P+++ ++F V
Sbjct: 8 IEIVKTLRGHGHQAYLVGGCVRDLLLGRDPADYDVATDAIPDQVMKIFPKTWAVGAQFGV 67
Query: 430 RMINVNGERHGTITARINDKEN---FEVTTLRIDMV-TDGRFAD-VQFTKDWKLDANRRD 594
++ V E A + EV T R D V +DGR D V+F++D + D RRD
Sbjct: 68 VLVPVPDEPECDPEATHPQSHHHGCIEVATFRSDGVYSDGRHPDEVRFSQDPREDVQRRD 127
Query: 595 LTINSMFL 618
TIN M L
Sbjct: 128 FTINGMLL 135
>UniRef50_Q19Y52 Cluster: Gp8; n=1; Mycobacterium phage Wildcat|Rep:
Gp8 - Mycobacterium phage Wildcat
Length = 401
Score = 60.9 bits (141), Expect = 3e-08
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = +1
Query: 265 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 444
E+ +L K+F H+I + GG VRD+L+G +D+D AT A PE ++ +
Sbjct: 6 ELCELAKLFAP--HKIYLVGGTVRDMLLGRESQDIDIATDAPPEVSSDILRKWGEEFWD- 62
Query: 445 NGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
G R GT+ A+ D E +VTT R D R VQ+ + D RRD TIN++
Sbjct: 63 PGVRFGTVCAKKGDME-VQVTTFRAAEDYTQGDRHPKVQWGSHIENDLLRRDFTINAI 119
>UniRef50_A1HMM1 Cluster: Polynucleotide adenylyltransferase; n=1;
Thermosinus carboxydivorans Nor1|Rep: Polynucleotide
adenylyltransferase - Thermosinus carboxydivorans Nor1
Length = 302
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
IAGGAVRDL+ G D D AT+A PE ++E+ + ++++ G +G + + D
Sbjct: 25 IAGGAVRDLVAGRPVNDYDIATSARPEAVREIAARQGWQVVDKLGTNYGVVMV-VVDGTG 83
Query: 496 FEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
EV T R + + R A+V + D +RRD T+N+M + G++
Sbjct: 84 VEVATFRGERYGEDSHRPAEVWYADTITDDLSRRDFTVNAMAMDVAGNI 132
>UniRef50_Q9Z6U2 Cluster: Poly A Polymerase; n=9; Chlamydiaceae|Rep:
Poly A Polymerase - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 430
Score = 60.1 bits (139), Expect = 4e-08
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Frame = +1
Query: 214 PIVIKVDSPEFK-SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTAT 390
P + V + K F+ + + K K + I GG +RDLL+ TPKD D +T+A
Sbjct: 26 PTIYSVSNHNIKLKDFSPHALSVIKTLRKAGYIAYIVGGCIRDLLLNTTPKDFDISTSAK 85
Query: 391 PEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKD- 567
PEE+K +F + + G+R R + K+ EV+T R TD DV TKD
Sbjct: 86 PEEIKAIF-----KNCILVGKRFRLAHIRFS-KQIIEVSTFRSGS-TD---EDVLITKDN 135
Query: 568 -W---KLDANRRDLTINSMF 615
W + D RRD TIN +F
Sbjct: 136 LWGTPEEDVLRRDFTINGLF 155
>UniRef50_Q6M1D4 Cluster: POLYA POLYMERASE; n=11;
Corynebacterineae|Rep: POLYA POLYMERASE -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 494
Score = 60.1 bits (139), Expect = 4e-08
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +1
Query: 268 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
++ L F H + + GG+VRD +G DLDF T+A PEE K + + ++
Sbjct: 39 LVPLAAAFSSKGHSLYLVGGSVRDAFLGELGHDLDFTTSARPEETKAILD-DYADVVWDT 97
Query: 448 GERHGTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSM 612
G GT++A + ++ E+TT R D+ + R +V F + D RRD +N+M
Sbjct: 98 GIAFGTLSAEKHGQQ-IEITTFRSDLYDGNSRNPEVTFGDTLEGDLIRRDFKVNAM 152
>UniRef50_Q41GT8 Cluster: Polynucleotide adenylyltransferase; n=1;
Exiguobacterium sibiricum 255-15|Rep: Polynucleotide
adenylyltransferase - Exiguobacterium sibiricum 255-15
Length = 421
Score = 60.1 bits (139), Expect = 4e-08
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E I GGAVRD+L+ P D D AT+ PE + +F ++ G HGT+T + D
Sbjct: 60 EAYIVGGAVRDMLLKREPGDYDLATSLLPEAVMHLFP-----VVIPTGLDHGTVTV-VLD 113
Query: 487 KENFEVTTLRIDMV-TDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSV 636
FEVTT R + +D R D V + D RRD TIN+M L G V
Sbjct: 114 HVPFEVTTFRSESTYSDRRRPDEVTLGVSLEEDLTRRDFTINAMALKPTGLV 165
>UniRef50_Q1YQK0 Cluster: Poly(A) polymerase; n=1; gamma
proteobacterium HTCC2207|Rep: Poly(A) polymerase - gamma
proteobacterium HTCC2207
Length = 453
Score = 60.1 bits (139), Expect = 4e-08
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 235 SPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
SP+ + +V+D + K E + GG VRDLL+GL PKD D AT+A P E+KE+F
Sbjct: 32 SPDMINRDAFKVVD---VLQKAGFEAYVVGGCVRDLLIGLKPKDFDVATSAKPWEVKELF 88
Query: 415 TAEEV-----RMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLD 579
+ ++++V R + + R G + D
Sbjct: 89 RRSRIIGRRFQIVHVQFSREIIEVTTFRSNSSQSTSKNRRQQTDSGMLTRDNVFGTVEED 148
Query: 580 ANRRDLTINSMF 615
A+RRDLT+N+++
Sbjct: 149 ASRRDLTVNALY 160
>UniRef50_A6PUV6 Cluster: Poly(A) polymerase precursor; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Poly(A)
polymerase precursor - Victivallis vadensis ATCC BAA-548
Length = 412
Score = 59.7 bits (138), Expect = 6e-08
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Frame = +1
Query: 268 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
VI L E I GGA+RDLL+G TPKD D +T+ATPEE++ +F R+I
Sbjct: 11 VISLISELQNAGFEAYIVGGAIRDLLLGRTPKDYDISTSATPEEVRGVFGRRIARII--- 67
Query: 448 GERHGTITARINDKENFEVTTLRI-----DMVTDGR----------FADVQFTKDWKLDA 582
G+R + + E FEV+T R + DGR +D +F + DA
Sbjct: 68 GKRFRLVHVQYGG-ELFEVSTFRKAPTQGQLRPDGRPAKDLPEHMILSDNEFGSA-EEDA 125
Query: 583 NRRDLTINSMF 615
RRD T+N++F
Sbjct: 126 WRRDFTVNALF 136
>UniRef50_A5CWU4 Cluster: Poly(A) polymerase; n=2; sulfur-oxidizing
symbionts|Rep: Poly(A) polymerase - Vesicomyosocius
okutanii subsp. Calyptogena okutanii (strain HA)
Length = 383
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = +1
Query: 247 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 426
+S+ ++ + + I +K + + GG VRD L+ LTPKD D AT A PE++ ++F +
Sbjct: 12 RSLLDKDALKVINIINKAGFKAYLVGGCVRDFLLSLTPKDFDIATNAKPEQVHKLF--KR 69
Query: 427 VRMINVNGERHGTITARINDKENFEVTTLR---IDMVTDGRFADVQFTKDWKLDANRRDL 597
R+I G R + + ++ EV T R + + +G + + D RRDL
Sbjct: 70 SRLI---GRRFRLVHVMFSARKFIEVATFRSGKVQVANNGVVMRDNCYGNIEDDVVRRDL 126
Query: 598 TINSMF 615
+IN+++
Sbjct: 127 SINALY 132
>UniRef50_Q7VFG8 Cluster: Poly(A) polymerase; n=1; Helicobacter
hepaticus|Rep: Poly(A) polymerase - Helicobacter
hepaticus
Length = 468
Score = 58.8 bits (136), Expect = 1e-07
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Frame = +1
Query: 217 IVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTP------KDLDFA 378
I+ K+ + F +EV+ + + +E I GG VRD+L+ D D
Sbjct: 32 ILSKMKTHIFTPTLPKEVLYILESLQSAGYEAYIVGGCVRDMLLAQNSHIPYVINDYDIT 91
Query: 379 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRID--MVTDGRFADV 552
T+A P+E+ ++F A + G ++GTI+ I + +++EVTT RID + +V
Sbjct: 92 TSALPQEVMKLF-AHTIH----TGLKYGTISVLI-ESQSYEVTTFRIDGSYINARSPKNV 145
Query: 553 QFTKDWKLDANRRDLTINSM 612
FT+ D RRD TIN++
Sbjct: 146 TFTRSLAQDLQRRDFTINAL 165
>UniRef50_Q73LY6 Cluster: PolyA polymerase family protein; n=1;
Treponema denticola|Rep: PolyA polymerase family protein
- Treponema denticola
Length = 380
Score = 58.8 bits (136), Expect = 1e-07
Identities = 41/117 (35%), Positives = 61/117 (52%)
Frame = +1
Query: 265 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 444
E + + + + E I GGAVRDLL+G PKD D AT+A P ++++MF R V
Sbjct: 35 EAVKIIQRLNSQGFEAYIVGGAVRDLLIGHVPKDFDIATSAEPSKIRKMF-----RNSRV 89
Query: 445 NGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
G R + +K +EV+T R DG + T D D +RRD T+N+++
Sbjct: 90 IGRRFRLVHIFFGEK-IYEVSTFR--STEDGSIGNKFGTID--EDVHRRDFTLNALY 141
>UniRef50_A6FZN1 Cluster: Poly(A) polymerase; n=1; Plesiocystis
pacifica SIR-1|Rep: Poly(A) polymerase - Plesiocystis
pacifica SIR-1
Length = 486
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV-----RMINV--NGERHG 462
HE + GG VRDL + PKD D AT+A PE+++ +F + ++ +V +
Sbjct: 52 HEAYLVGGCVRDLYLNRKPKDFDVATSARPEQIRRVFRNSRIIGRRFKLAHVFFGSKIIE 111
Query: 463 TITARINDKENFEVTTLRIDMVTD-GRFADVQFTKD--W---KLDANRRDLTINSMF 615
T T R N KE T D + G D+ T D W K DA RRD TIN +F
Sbjct: 112 TSTFRTNPKEEEHAATSEGDAAAEGGGGGDLLITHDNSWGDIKDDARRRDFTINGLF 168
>UniRef50_A0UUV7 Cluster: Metal dependent phosphohydrolase; n=1;
Clostridium cellulolyticum H10|Rep: Metal dependent
phosphohydrolase - Clostridium cellulolyticum H10
Length = 448
Score = 58.8 bits (136), Expect = 1e-07
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = +1
Query: 277 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 456
+KK+ ++ ++ + GG VRD ++ P D D T A P ++K +F R + G +
Sbjct: 17 IKKL-NEAGYDAYLVGGCVRDSILCKAPYDWDITTNALPIDIKSIFD----RTYD-TGIK 70
Query: 457 HGTITARINDKENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSM 612
HGT+T I + EVTT RID D R D V+FT + D RRD TIN+M
Sbjct: 71 HGTVTVLIGEM-CLEVTTYRIDGDYKDFRRPDKVEFTSSLREDLARRDFTINAM 123
>UniRef50_Q1Q5Z9 Cluster: Similar to poly(A) polymerase; n=2;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
poly(A) polymerase - Candidatus Kuenenia stuttgartiensis
Length = 437
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
+ I++ K + AGG VRD++M D D AT A P ++ +F + +
Sbjct: 5 QNAIEIVKTLQDKGFDALFAGGCVRDMIMRRESADYDIATNALPHDVMNLFK----KTFS 60
Query: 442 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSM 612
V G ++G + + D NFEV T R + +DGR D + D RRD TIN +
Sbjct: 61 V-GTQYGVVVV-VKDGHNFEVATFRTEKSYSDGRHPDYVSFSTAEEDVRRRDFTINGL 116
>UniRef50_A4E6N1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 464
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 322 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 501
GG VRD LMG D+D + +E K A + ++ +G + G ITA I+D E E
Sbjct: 33 GGWVRDALMGYPSHDVDMCCSGLWQESKAALEAAGIAVVE-SGIKFGGITA-ISDGERIE 90
Query: 502 VTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSM 612
VTT R+D TDGR V+ + D RRD T+N+M
Sbjct: 91 VTTYRLDGFYTDGRHPQSVERAASLEDDLARRDFTVNAM 129
>UniRef50_Q9HV72 Cluster: Poly(A) polymerase; n=30; cellular
organisms|Rep: Poly(A) polymerase - Pseudomonas
aeruginosa
Length = 467
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Frame = +1
Query: 256 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV-- 429
F+ + + +I + ++ + GG VRD ++G+ PKD D AT+ATPE+++ F +
Sbjct: 38 FSRNAVKVVEILQRAGYQAYVVGGCVRDQMLGIAPKDFDVATSATPEQVRAEFRNARIIG 97
Query: 430 ---RMINVNGERH--GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRD 594
++++V+ R T R + E + R GR + DA RRD
Sbjct: 98 RRFKLVHVHFGREIIEVATFRAHHPEGQDDGDSRASSNESGRILRDNVYGSLEDDAQRRD 157
Query: 595 LTINSMF 615
TIN+++
Sbjct: 158 FTINALY 164
>UniRef50_Q6F852 Cluster: Poly(A) polymerase I; n=2;
Acinetobacter|Rep: Poly(A) polymerase I - Acinetobacter
sp. (strain ADP1)
Length = 485
Score = 58.0 bits (134), Expect = 2e-07
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Frame = +1
Query: 268 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
++D+ +K +E I GG VRDL++GL PKD D T ATP ++KE+F R+I
Sbjct: 20 ILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVF-GRRCRIIG-- 76
Query: 448 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKD--W---KLDANRRDLTINSM 612
R + + +E EV T R A +D W + D RRD +IN++
Sbjct: 77 --RRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTL 134
Query: 613 F 615
+
Sbjct: 135 Y 135
>UniRef50_A3DF92 Cluster: Metal dependent phosphohydrolase; n=1;
Clostridium thermocellum ATCC 27405|Rep: Metal dependent
phosphohydrolase - Clostridium thermocellum (strain ATCC
27405 / DSM 1237)
Length = 442
Score = 58.0 bits (134), Expect = 2e-07
Identities = 40/99 (40%), Positives = 52/99 (52%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
I GG +RD ++G P D D AT A PE++K +F I G +HGT+TA IN N
Sbjct: 29 IVGGCIRDAILGKVPADWDVATDAQPEDVKLIFD-----KIVETGIKHGTVTAVINGC-N 82
Query: 496 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
+E+TT R A + KD D RD TIN+M
Sbjct: 83 YEITTFRAP-----SSAKIPTIKD---DLGLRDFTINAM 113
>UniRef50_A6T217 Cluster: Poly(A) polymerase; n=11;
Betaproteobacteria|Rep: Poly(A) polymerase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 455
Score = 57.6 bits (133), Expect = 2e-07
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GGAVRDLL+G+ PKD D AT ATPE++K +F R + G+R + ++
Sbjct: 57 LVGGAVRDLLLGVKPKDFDIATNATPEQVKRLF-----RRAFIIGKRFQIVHVMFG-QDL 110
Query: 496 FEVTTLR------IDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
EVTT R GR + DA RRD TIN+M+
Sbjct: 111 LEVTTFRGASTEAAPKDEHGRVLRDNTFGEQHEDALRRDFTINAMY 156
>UniRef50_Q6MEY5 Cluster: Putative poly A polymerase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative poly A polymerase - Protochlamydia amoebophila
(strain UWE25)
Length = 412
Score = 56.8 bits (131), Expect = 4e-07
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +1
Query: 253 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 432
+F + I + K+ K H AGG VRD +MG +D+D AT ATP ++ ++F
Sbjct: 3 VFKQAKIIVTKLV-KAGHTAYFAGGWVRDYVMGHPSEDIDIATDATPAQIMDIF--PNTL 59
Query: 433 MINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFADVQFTKDWKLDANRRDLTINS 609
++ G G + + + FEV T R D+ DGR + DA RRD TIN
Sbjct: 60 LV---GLAFGVVIV-VWEGHQFEVATFRKDLDYVDGRHPSGIVLSTAREDALRRDFTING 115
Query: 610 MF 615
MF
Sbjct: 116 MF 117
>UniRef50_Q4JSD7 Cluster: TRNA nucleotidyltransferase; n=1;
Corynebacterium jeikeium K411|Rep: TRNA
nucleotidyltransferase - Corynebacterium jeikeium
(strain K411)
Length = 547
Score = 56.8 bits (131), Expect = 4e-07
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +1
Query: 265 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 444
+++ L + F H + + GG+VRD L+G DLDF T A P+ + ++ T +
Sbjct: 64 DLLPLTQAFQDAGHSLYLVGGSVRDALLGRLSHDLDFTTDARPQAIVDIVT-PLAETVWD 122
Query: 445 NGERHGTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFL 618
G +GT++A + + E+TT R D R +V F D RRD N++ L
Sbjct: 123 TGIEYGTVSALVKG-QILEITTFRADQYDGQSRNPEVSFGDSLDGDLIRRDFRANAIAL 180
>UniRef50_Q7P2R0 Cluster: POLY(A) POLYMERASE; n=3; Fusobacterium
nucleatum|Rep: POLY(A) POLYMERASE - Fusobacterium
nucleatum subsp. vincentii ATCC 49256
Length = 451
Score = 56.8 bits (131), Expect = 4e-07
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Frame = +1
Query: 256 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRM 435
F E I + +KY I GGA+RD+L+GL PKD+DF T +K +F+ +
Sbjct: 9 FNEVEIKILNKLNKYGKGY-IVGGAIRDILLGLKPKDVDFTTNLPYGTLKTLFSEYTPK- 66
Query: 436 INVNGERHGTITARINDKENFEVTTLRIDMV--TDG-----RFADVQFTKDWKLDANRRD 594
G+ G + RIN+ + +E+ R D DG V F D + D RRD
Sbjct: 67 --ETGKSFGVLRIRINNID-YEIAKFRKDNYEEKDGLKIIPEEKKVSFVDDIRNDLARRD 123
Query: 595 LTINSM 612
TIN+M
Sbjct: 124 FTINAM 129
>UniRef50_Q6AQS1 Cluster: Probable polyA polymerase; n=1;
Desulfotalea psychrophila|Rep: Probable polyA polymerase
- Desulfotalea psychrophila
Length = 497
Score = 56.4 bits (130), Expect = 5e-07
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRDL +G TPKD D +T A P +++++F + N G R + +
Sbjct: 90 LVGGGVRDLYLGKTPKDFDISTNARPGQLRKLF-----KNSNTIGRRFRLVQVFFKGGKT 144
Query: 496 FEVTTLR--IDMVTDGRFADVQFTKDWKL---DANRRDLTINSMF 615
EV+TLR + DG A + + DA RRDLTINS+F
Sbjct: 145 IEVSTLRSLSEHDLDGPEAILAPNNTFGTLDEDAQRRDLTINSLF 189
>UniRef50_A7HCV9 Cluster: tRNA cytidylyltransferase; n=2;
Anaeromyxobacter|Rep: tRNA cytidylyltransferase -
Anaeromyxobacter sp. Fw109-5
Length = 434
Score = 56.4 bits (130), Expect = 5e-07
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +1
Query: 316 IAGGAVRDLLM--GLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
+ GGAVRDLL+ D D AT A PE++ +F + G HGT+T +
Sbjct: 32 LVGGAVRDLLLHRARDANDFDVATPALPEQVAALFPK-----VIPTGIEHGTVTVLVGG- 85
Query: 490 ENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMFL 618
E EVTT R + DGR + V F +D + D RRD TIN++ L
Sbjct: 86 EPIEVTTFRGEGEYKDGRRPESVTFHEDLEADLARRDFTINALAL 130
>UniRef50_A5WHD2 Cluster: Poly(A) polymerase; n=3;
Psychrobacter|Rep: Poly(A) polymerase - Psychrobacter
sp. PRwf-1
Length = 719
Score = 56.0 bits (129), Expect = 7e-07
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +1
Query: 247 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 426
K+ +I++ +K + I GG VRD L+GL+PKD D T A P E+K++F +
Sbjct: 13 KADLPNSIIEVIATLNKGGFDAYIVGGGVRDTLLGLSPKDFDAVTDARPHEVKDLF-GKR 71
Query: 427 VRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGR-FADVQFTKD--W---KLDANR 588
R+I R + + ++ EV T R D +D +D W + D R
Sbjct: 72 CRIIG----RRFQLAHVYSGRDMIEVATFRAPPTGDAHATSDGMIVRDNVWGDIEQDFAR 127
Query: 589 RDLTINSMF 615
RD +IN+M+
Sbjct: 128 RDFSINAMY 136
>UniRef50_Q9F7R3 Cluster: Predicted poly(A) polymerase; n=1;
uncultured marine gamma proteobacterium EBAC31A08|Rep:
Predicted poly(A) polymerase - Gamma-proteobacterium
EBAC31A08
Length = 410
Score = 55.6 bits (128), Expect = 1e-06
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Frame = +1
Query: 271 IDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 450
I + + K + + GG VRD L GL PKD D AT ATPE++++ F A R+I G
Sbjct: 12 ISVVQDLQKNNFQAYLVGGCVRDALTGLEPKDFDIATNATPEQIRKTFKAS--RII---G 66
Query: 451 ERHGTITARINDKENFEVTTLRI--------DMVTDGRFADVQFTKDW---KLDANRRDL 597
+R + N E EV T R ++VTD + +W + D +RRD
Sbjct: 67 KRFKLVHV-FNRSELLEVATFRSGSDQEDGENIVTDST-GKILRDNNWGTLEQDCHRRDF 124
Query: 598 TINSMF 615
T+N+++
Sbjct: 125 TVNALY 130
>UniRef50_Q04RG6 Cluster: TRNA nucleotidyltransferase; n=4;
Leptospira|Rep: TRNA nucleotidyltransferase - Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
Length = 489
Score = 55.6 bits (128), Expect = 1e-06
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Frame = +1
Query: 247 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 426
K++ E+ + + +K+ + I GG VRDLL+G PKD D T ATP ++K++F
Sbjct: 36 KNMIDEDAVKIIHRLNKFGFKAYIVGGGVRDLLLGRKPKDFDVVTNATPNQIKKIF--NN 93
Query: 427 VRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKL---------- 576
R+I G R + K EV+T R + D R +D+ +
Sbjct: 94 CRII---GRRFKIVHILFRGKV-IEVSTFR--SLPDYRLGKAVEDQDYLIKRDNKFGTPQ 147
Query: 577 -DANRRDLTINSMF 615
DA RRD TINS++
Sbjct: 148 EDAARRDFTINSLY 161
>UniRef50_Q6YRB3 Cluster: TRNA nucleotidyltransferase/polyA
polymerase; n=2; Candidatus Phytoplasma asteris|Rep:
TRNA nucleotidyltransferase/polyA polymerase - Onion
yellows phytoplasma
Length = 412
Score = 54.8 bits (126), Expect = 2e-06
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTP-KDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
E I GG VRD L+ + +D+D T A P+++K + E+ I +N +G+
Sbjct: 29 EAFIVGGTVRDYLLKINANEDIDITTAAAPQQIKLLLCPEKTTQIKIN---YGSFKITF- 84
Query: 484 DKENFEVTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+ FE+TT R + D R +++ FTK+ D RRD TIN++ + G ++
Sbjct: 85 ENYLFEITTYRKEGTYKDYRHPSEIFFTKNIHQDLLRRDFTINTLLMDETGKIF 138
>UniRef50_Q126S3 Cluster: Poly(A) polymerase; n=9;
Burkholderiales|Rep: Poly(A) polymerase - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 550
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
+ +D+ + + E + GGAVRDLL+GL PKD D AT ATPE++K +F
Sbjct: 51 DRAMDVVRTLKQAGFEAYVVGGAVRDLLVGLRPKDFDVATDATPEQVKSLF 101
>UniRef50_Q67QK4 Cluster: Putative RNA nucleotidyltransferase; n=1;
Symbiobacterium thermophilum|Rep: Putative RNA
nucleotidyltransferase - Symbiobacterium thermophilum
Length = 457
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/88 (39%), Positives = 48/88 (54%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
HE + GGAVRDLL+GL P+D D AT+A P E++ +F E R + E GT+
Sbjct: 41 HEAVVVGGAVRDLLLGLVPQDWDLATSARPAELQALF--PEGRAVGAARET-GTLLIP-G 96
Query: 484 DKENFEVTTLRIDMVTDGRFADVQFTKD 567
D +E+T R + +G A FT D
Sbjct: 97 DGTTYEITPYRAGRL-EGDLARRDFTID 123
>UniRef50_Q1NNS3 Cluster: Poly(A) polymerase, PcnB; n=2; delta
proteobacterium MLMS-1|Rep: Poly(A) polymerase, PcnB -
delta proteobacterium MLMS-1
Length = 460
Score = 53.6 bits (123), Expect = 4e-06
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
H + GG VRDLL+G +PKD D +T+A P E++++F R + G R +
Sbjct: 41 HTAYLVGGGVRDLLLGKSPKDFDISTSAKPGELRKIF-----RNSRIIGRRFRLVQVFFP 95
Query: 484 DKENFEVTTLRI--DMVTDG----RFADVQFTKDWKLDANRRDLTINSMF 615
+ EV+T R + DG A + DA RRDLTIN++F
Sbjct: 96 GGKIIEVSTFRCRSEFELDGSEVETLAQDNTFGNPAEDAFRRDLTINALF 145
>UniRef50_A1RG69 Cluster: Poly(A) polymerase; n=15;
Gammaproteobacteria|Rep: Poly(A) polymerase - Shewanella
sp. (strain W3-18-1)
Length = 494
Score = 53.6 bits (123), Expect = 4e-06
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRDLL+GL PKD D T ATPEE+K++F R V G R + + ++
Sbjct: 94 LVGGGVRDLLLGLEPKDFDVVTNATPEEIKKLF-----RNCRVVGRRF-RLAHIVFGRDV 147
Query: 496 FEVTTLR---------IDMV-TDGRFADVQFTKDWKLDANRRDLTINSMF 615
EV T R I +GR + DA RRD T+N+++
Sbjct: 148 IEVATFRGHHGESNEKISKANAEGRLLRDNVYGEIDEDAERRDFTVNALY 197
>UniRef50_O83294 Cluster: Polynucleotide adenylyltransferase; n=1;
Treponema pallidum|Rep: Polynucleotide
adenylyltransferase - Treponema pallidum
Length = 478
Score = 53.2 bits (122), Expect = 5e-06
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
I + GGAVRD L+ + D D AT A PE ++ +F R G HGT+T
Sbjct: 24 IYVVGGAVRDFLLNRSAHDWDLATDAPPERVRMLF-----RRTVPTGIEHGTVTILFRG- 77
Query: 490 ENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINS 609
+ E TT R++ +D R D V F + D RRD T+N+
Sbjct: 78 HSIECTTFRVESDYSDRRHPDSVCFAARIEDDLARRDFTVNA 119
>UniRef50_Q1LJ89 Cluster: Poly(A) polymerase; n=1; Ralstonia
metallidurans CH34|Rep: Poly(A) polymerase - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 529
Score = 53.2 bits (122), Expect = 5e-06
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = +1
Query: 220 VIKVDSPEFK-SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 396
V+ VD ++ + + + + ++ I GGAVRDLL+G+ PKD D AT ATPE
Sbjct: 28 VVGVDEHRIDPALISRNAVKVTSTLQQAGYQAFIVGGAVRDLLLGIKPKDFDVATNATPE 87
Query: 397 EMKEMFTAEEVRMINVNGERHGTITARI---NDKENFEVTTLR--IDMVTDGRFADVQFT 561
+++ +F R + G R + ++E EV+T R +D V + +
Sbjct: 88 QVQALF-----RRSRIIGRRFQIVHVTFYGGREQEIIEVSTFRALVDAVASETLPEGRRL 142
Query: 562 KDWKLDA 582
K +LD+
Sbjct: 143 KRAELDS 149
>UniRef50_A6P236 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 438
Score = 52.8 bits (121), Expect = 7e-06
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMG-LTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
E + GGAVRD +MG KD D AT+A P+++K +F+ +I G +HGT+T +
Sbjct: 20 EAFLVGGAVRDYVMGKRAAKDWDIATSALPQQVKAVFSG--YHLIE-TGLKHGTVTV-VV 75
Query: 484 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
D + E+TT R D + + D RRD T+N++
Sbjct: 76 DHQPIEITTYRTDSGCP--------SPSLRADLERRDFTMNAL 110
>UniRef50_Q5ZVA2 Cluster: Poly(A) polymerase I; n=4; Legionella
pneumophila|Rep: Poly(A) polymerase I - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 436
Score = 52.0 bits (119), Expect = 1e-05
Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
I GG+VRDLL+ PKD D AT ATP E+K +F + R+I G R + + +E
Sbjct: 50 IVGGSVRDLLLHKAPKDFDIATNATPNEVKNLF--KNARII---GRRFKLVHILFH-REI 103
Query: 496 FEVTTLRIDMVTDGRFADVQFTKDWKL-----------DANRRDLTINSMFLGFDGS 633
EV T R +D A QF + L DA RRD TINS++ S
Sbjct: 104 IEVATFRGHNSSD---ASHQFNERGMLVRDNVYGSLDEDAWRRDFTINSLYYNISDS 157
>UniRef50_A7H723 Cluster: Poly(A) polymerase; n=2;
Anaeromyxobacter|Rep: Poly(A) polymerase -
Anaeromyxobacter sp. Fw109-5
Length = 548
Score = 52.0 bits (119), Expect = 1e-05
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Frame = +1
Query: 301 KHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARI 480
+H GG VRDLL+G PKD D AT A P E++ +F R+I G R
Sbjct: 66 RHRAYFVGGCVRDLLLGAKPKDFDVATDAHPGEVRAIF--RNCRLI---GRRFRLAHVYF 120
Query: 481 NDKENFEVTTLRIDMVTDGRFA----DVQFTKD-----WKLDANRRDLTINSMF 615
+ EV T R + V G D+ T+D + DA RRD T+N +F
Sbjct: 121 RGGKVIEVATFRKNPVDVGEDVPDTDDLLITRDNVFGTAEEDAVRRDFTVNGLF 174
>UniRef50_Q62HE1 Cluster: PolyA polymerase; n=45; cellular
organisms|Rep: PolyA polymerase - Burkholderia mallei
(Pseudomonas mallei)
Length = 515
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
I GGAVRDLL+G+ PKD D AT ATP E++ +F R+I G R + + +E
Sbjct: 89 IVGGAVRDLLLGIAPKDFDVATDATPTEVQRLF--RRARLI---GRRFQIVHVQFG-QEL 142
Query: 496 FEVTTLR 516
EV+T R
Sbjct: 143 IEVSTFR 149
>UniRef50_Q8ZRQ8 Cluster: Poly(A) polymerase; n=89;
Proteobacteria|Rep: Poly(A) polymerase - Salmonella
typhimurium
Length = 465
Score = 51.6 bits (118), Expect = 2e-05
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Frame = +1
Query: 259 TEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMI 438
+E + + +K +E + GG VRDLL+G PKD D T ATP++++++F R++
Sbjct: 45 SENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLF--RNCRLV 102
Query: 439 NVNGERHGTITARINDKENFEVTTLR-------IDMVTDGRFADVQFTKD-----WKLDA 582
R + + E EV T R D T R + +D + DA
Sbjct: 103 G----RRFRLAHVMFGPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDA 158
Query: 583 NRRDLTINSMF 615
RRD TINS++
Sbjct: 159 QRRDFTINSLY 169
>UniRef50_Q6MHS6 Cluster: Poly(A) polymerase; n=1; Bdellovibrio
bacteriovorus|Rep: Poly(A) polymerase - Bdellovibrio
bacteriovorus
Length = 409
Score = 51.2 bits (117), Expect = 2e-05
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E + GG VRDLL+G+ PKD D AT+A P +++ ++V V G R + + D
Sbjct: 40 ETYLVGGCVRDLLVGIHPKDFDIATSAHPNQVR-----KKVPNAYVIGRRFKLVLVKRGD 94
Query: 487 KENFEVTTLRIDMVTDGRFADV--------QFTKDWKLDANRRDLTINSMF 615
++ FEV T R + VT AD + + DA RRD T N++F
Sbjct: 95 QQ-FEVATFRRN-VTQEELADQGDDSVEGDNYFGTVEEDAVRRDFTCNAVF 143
>UniRef50_Q057U5 Cluster: Poly(A) polymerase I; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: Poly(A)
polymerase I - Buchnera aphidicola subsp. Cinara cedri
Length = 407
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = +1
Query: 292 DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 471
+K +E + GG VRDLL+G PKD D AT A P+E++++F + R+I R I
Sbjct: 28 NKLGYEAYLVGGGVRDLLLGKKPKDFDIATNAKPDEIRKLF--KNCRLIG----RRFIIA 81
Query: 472 ARINDKENFEVTTLR 516
I E EV+T R
Sbjct: 82 HLIFKNEIIEVSTFR 96
>UniRef50_Q9PLM2 Cluster: Poly(A) polymerase family protein; n=7;
Chlamydiaceae|Rep: Poly(A) polymerase family protein -
Chlamydia muridarum
Length = 410
Score = 50.0 bits (114), Expect = 5e-05
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Frame = +1
Query: 280 KKIFDKYK---HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 450
KKI K + ++ GG+VRD+L+ +++D AT A+P + +F + I G
Sbjct: 10 KKIVQKLRNAGYQAYFVGGSVRDMLLDRPIEEVDIATNASPTIVTTIF--PDTLSI---G 64
Query: 451 ERHGTITARINDKENFEVTTLRIDM-VTDGRFADVQFTKDWKLDANRRDLTINSMF 615
G I + N + FEV T R D DGR + K DA RRD TIN M+
Sbjct: 65 AAFGIIAVKENG-QLFEVATFRSDEDYADGRHPNRVIFASMKDDAIRRDFTINGMY 119
>UniRef50_Q6MBL7 Cluster: Putative Poly(A) polymerase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative Poly(A) polymerase - Protochlamydia amoebophila
(strain UWE25)
Length = 424
Score = 50.0 bits (114), Expect = 5e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG+VRDLL+ PKD D +T+A PE++K +F R + G R R K
Sbjct: 38 LVGGSVRDLLLKRVPKDFDISTSARPEQIKAIFQ----RQCILIGRRFRLAHIRFGHK-I 92
Query: 496 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
EV+T R G + D RRD TIN +F
Sbjct: 93 IEVSTFRTGENDSGLILHDNEWGTPEEDVLRRDFTINGLF 132
>UniRef50_Q605H2 Cluster: PolyA polymerase; n=2;
Gammaproteobacteria|Rep: PolyA polymerase -
Methylococcus capsulatus
Length = 438
Score = 50.0 bits (114), Expect = 5e-05
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 247 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 426
+++ ++ + + K ++ + GG VRDLL+G PKD D T A PEE+K +F
Sbjct: 56 RALISDNALKVLYRLRKAGYQAYLVGGCVRDLLLGREPKDFDVVTDAHPEEIKAVF--RN 113
Query: 427 VRMINVNGERHGTITARINDKENFEVTTLRI-------DMVTD-GRFADVQFTKDWKLDA 582
R+I G R + E EV T R + VT+ GR + DA
Sbjct: 114 CRLI---GRRFRLAHVHFGE-EIIEVATFRALTREPHDEHVTEGGRILRDNVYGTIEEDA 169
Query: 583 NRRDLTINSMF 615
RRD T+N+++
Sbjct: 170 FRRDFTVNALY 180
>UniRef50_Q39ZX1 Cluster: Poly(A) polymerase; n=2;
Desulfuromonadales|Rep: Poly(A) polymerase - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 442
Score = 50.0 bits (114), Expect = 5e-05
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Frame = +1
Query: 277 LKKIFDKYKHEIR--IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 450
LK ++ H + + GG VRDLL+ PKD D AT ATP ++K++F R + G
Sbjct: 45 LKVLYRLRNHGFKAYLVGGGVRDLLLNRRPKDFDVATDATPSQVKKLF-----RNCFLVG 99
Query: 451 ERHGTITARINDKENFEVTTL----RIDMVTDGRFADVQFTKDW----KLDANRRDLTIN 606
R R + EV T R + + D FT++ + DA RRD +IN
Sbjct: 100 RRFRLAHIRFAENYVVEVATFRRQPRPEELPDDPAEHFFFTENVFGTPREDAFRRDFSIN 159
Query: 607 SMFLGFD 627
+F D
Sbjct: 160 GLFYNID 166
>UniRef50_A7BYS8 Cluster: Poly(A) polymerase; n=1; Beggiatoa sp.
PS|Rep: Poly(A) polymerase - Beggiatoa sp. PS
Length = 161
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 172 FRSKMDLNLK--CRENPIVIKVDSPEF-KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDL 342
F SK+ L ++ ++ PI I + + + + + + +K ++ + GG VRD+
Sbjct: 40 FHSKVSLPVRDSIKKTPIRIPRNEHTLSRKLMSPAALTVLYQLNKAGYQAFLVGGGVRDV 99
Query: 343 LMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLR 516
L+G PKD D T A PE++K +F R + G R RIN +E EV T R
Sbjct: 100 LLGRVPKDFDVVTNALPEQIKNIF-----RSCRLIGRRFVLAHVRIN-REIVEVATFR 151
>UniRef50_Q2J4B5 Cluster: Metal dependent phosphohydrolase; n=40;
Actinobacteria (class)|Rep: Metal dependent
phosphohydrolase - Frankia sp. (strain CcI3)
Length = 502
Score = 49.6 bits (113), Expect = 6e-05
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Frame = +1
Query: 274 DLKKIFDKYKHEIRIAGGAVRDLLMG--------LTPKDLDFATTATPEEMKEMFTAEEV 429
+L ++F + + + GG+VRD L+G P DLDFAT A PE + E+ T
Sbjct: 27 ELGRVFTANGYLLHLVGGSVRDALLGRPASAVSGAVPADLDFATDARPERVLEI-TRGWA 85
Query: 430 RMINVNGERHGTITARINDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTIN 606
G GT+ FE+TT R + R V + + D +RRD T+N
Sbjct: 86 EATWEAGIAFGTV-GLARHGVRFEITTYRSEAYDRKSRNPAVTYGDSLEADLSRRDFTVN 144
Query: 607 SMFLGFDG 630
+M + G
Sbjct: 145 AMAVSVPG 152
>UniRef50_O83605 Cluster: Polynucleotide adenylyltransferase; n=1;
Treponema pallidum|Rep: Polynucleotide
adenylyltransferase - Treponema pallidum
Length = 370
Score = 49.6 bits (113), Expect = 6e-05
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
+E I GGAVRDL+ G TPKD D T A P ++ +F R + G R +
Sbjct: 48 YETYIVGGAVRDLVAGRTPKDFDIVTGAVPSRIRRLF-----RNSRIIGRRFRIVHVSCG 102
Query: 484 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
+ +EV+T R V +G V + DA RRD ++N+++
Sbjct: 103 -SQLYEVSTFR-SRVGEG---SVCVPGTLEEDAWRRDFSVNALY 141
>UniRef50_A0LF07 Cluster: Polynucleotide adenylyltransferase region;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Polynucleotide adenylyltransferase region -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 427
Score = 48.8 bits (111), Expect = 1e-04
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +1
Query: 253 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 432
I +V+ + I H + + GGA+RD +G P+D D AT A+ +E+ +F R
Sbjct: 9 IVPPDVMAMMGILSDAGHGVWLVGGALRDHFLGQAPRDFDLATDASADEVVRLFP----R 64
Query: 433 MINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
+I + G RHGT+ ++ EVT+ T G + D RRD TIN++
Sbjct: 65 VIPI-GIRHGTVQVHTRTRD-VEVTS------TPGSGLEGILE-----DLGRRDFTINAL 111
Query: 613 FLGF-DGS 633
L + +GS
Sbjct: 112 ALSYPEGS 119
>UniRef50_Q9KC89 Cluster: CCA-adding enzyme; n=1; Bacillus
halodurans|Rep: CCA-adding enzyme - Bacillus halodurans
Length = 375
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/110 (33%), Positives = 54/110 (49%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E I GGAVRD +G PKD+D T+A+PEE++ ++ +N + T+T +
Sbjct: 21 EAYIVGGAVRDYHIGRKPKDVDVVTSASPEEIRTLYP----HAFQIN-RQFQTLTVHL-Q 74
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
K EV+TLR + D D RD TIN+M L +G +
Sbjct: 75 KVAIEVSTLRGGSIED--------------DLCSRDFTINAMALAMNGDI 110
>UniRef50_Q2ACT2 Cluster: CBS:Phosphoesterase,
RecJ-like:Polynucleotide adenylyltransferase
region:Phosphoesterase, DHHA1; n=1; Halothermothrix
orenii H 168|Rep: CBS:Phosphoesterase,
RecJ-like:Polynucleotide adenylyltransferase
region:Phosphoesterase, DHHA1 - Halothermothrix orenii H
168
Length = 865
Score = 48.4 bits (110), Expect = 1e-04
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Frame = +1
Query: 217 IVIKVDSPEFKSIFTE---EVIDLKKIFDKY--KHEIRI--AGGAVRDLLMGLTPKDLDF 375
+ IK + +F+ + EV L + + KH++R+ GG VRDL++GL DLDF
Sbjct: 441 VKIKEEKYDFRRVLKRLPGEVYSLLNVIRREADKHDVRVYLVGGMVRDLILGLENNDLDF 500
Query: 376 ATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTD-GRFADV 552
+ + N ++ T R+N N + R ++ T G +V
Sbjct: 501 MVEGNIKYYLRALSRTFEENYTYN-DKFKTGRIRLNSGYNLDFAVARSEVYTSPGALPEV 559
Query: 553 QFTKDWKLDANRRDLTINSMFLGFD 627
+ T + D RRD T+N++ +G D
Sbjct: 560 E-TGEIVEDLFRRDFTVNALAIGVD 583
>UniRef50_Q093R8 Cluster: Poly(A) polymerase; n=2;
Cystobacterineae|Rep: Poly(A) polymerase - Stigmatella
aurantiaca DW4/3-1
Length = 576
Score = 48.0 bits (109), Expect = 2e-04
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Frame = +1
Query: 295 KYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITA 474
++ H+ + GG VRDLL+G PKD D AT+A P E++ F R+I G R
Sbjct: 124 QHGHQAYLVGGCVRDLLLGRRPKDFDVATSAHPGEVRATF--RNCRLI---GRRFRLAHV 178
Query: 475 RINDKENFEVTTLRIDMVT------------DGRFADVQFTKD-----WKLDANRRDLTI 603
+ EV+T R + + +G D+ T D + DA RRD TI
Sbjct: 179 YFKGGKIIEVSTFRANPLEMEAPEEEGAENGNGNGDDLLITHDNVFGTAEQDARRRDFTI 238
Query: 604 NSMF 615
N +F
Sbjct: 239 NGLF 242
>UniRef50_A6TR64 Cluster: Polynucleotide adenylyltransferase region
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Polynucleotide adenylyltransferase region precursor -
Alkaliphilus metalliredigens QYMF
Length = 875
Score = 48.0 bits (109), Expect = 2e-04
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 292 DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 471
D +++ I GG VRD L+G +DLDF + + ++ E+ GT T
Sbjct: 469 DTMGNDVFIVGGFVRDFLLGEENQDLDFVVEGDGIAFAQALNEIIQGRLTIH-EKFGTAT 527
Query: 472 ARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
++ DK +V T R + V+ + W D RRD TIN+M + + S +
Sbjct: 528 IQLPDKRTLDVVTARREYYEYPAAMPQVEKSSIWS-DLFRRDFTINAMAIQLNKSKF 583
>UniRef50_P44439 Cluster: Probable poly(A) polymerase; n=24;
Gammaproteobacteria|Rep: Probable poly(A) polymerase -
Haemophilus influenzae
Length = 452
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 256 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
F+ +++ + + E I GG +RDLL+G PKD D AT A PE+++ +F
Sbjct: 32 FSRNALNVVEKLQRQGFEAYIVGGCIRDLLLGKKPKDFDVATNARPEQIQNIF 84
>UniRef50_Q83EM9 Cluster: PolyA polymerase; n=3; Coxiella
burnetii|Rep: PolyA polymerase - Coxiella burnetii
Length = 439
Score = 47.2 bits (107), Expect = 3e-04
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Frame = +1
Query: 205 RENPIVIKVDSPEF-KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFAT 381
++ P VIK + +S + + + K +E + GG VRD+L+ PKD D AT
Sbjct: 20 KDRPRVIKRKNHSISRSDISPNALRVLYRLSKSGYEAYLVGGGVRDMLLSYHPKDFDIAT 79
Query: 382 TATPEEMKEMF-----TAEEVRMINV--NGERHGTITARINDKENFEVTTLRIDMVTDGR 540
A P E++++F R+++V E T R N +E + L T
Sbjct: 80 NARPHEIRKLFKNSRLIGRRFRLVHVYFPNEIIEVSTFRANAEELLKEEPLSEMQKTGAT 139
Query: 541 FADVQFTKDW-KLDANRRDLTINSMF 615
T + DA RRD T+N+++
Sbjct: 140 MLSEDNTYGTIEEDAWRRDFTVNALY 165
>UniRef50_Q31FF3 Cluster: Poly(A) polymerase; n=1; Thiomicrospira
crunogena XCL-2|Rep: Poly(A) polymerase - Thiomicrospira
crunogena (strain XCL-2)
Length = 484
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 262 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
+E +D+ + ++ + GG VRD+L+GL PKD D T A PE++K +F
Sbjct: 46 KEALDVLYGLKRAGYDAYLVGGGVRDILLGLEPKDFDVVTNAEPEQIKGVF 96
>UniRef50_A6W2I1 Cluster: Poly(A) polymerase; n=4;
Oceanospirillales|Rep: Poly(A) polymerase - Marinomonas
sp. MWYL1
Length = 484
Score = 47.2 bits (107), Expect = 3e-04
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +1
Query: 199 KCRENPIVI-KVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDF 375
K + PI+I + D + + + + +K + + GG VRD L+G+ PKD D
Sbjct: 20 KAQTYPIIISRSDHSLSRQDLSPNAVKVLYRLNKAGFDAFLVGGCVRDHLIGIKPKDFDV 79
Query: 376 ATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTD 534
T ATPEE+ +F+ R+I G R + +E EV+T R + D
Sbjct: 80 VTNATPEEVHTIFS--NSRLI---GRRFKLVHVTFG-REIIEVSTFRANSAQD 126
>UniRef50_A4M1Z9 Cluster: Poly(A) polymerase; n=1; Geobacter
bemidjiensis Bem|Rep: Poly(A) polymerase - Geobacter
bemidjiensis Bem
Length = 481
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRDLL+G PKD D T ATP ++K+MF R+I G R +D E
Sbjct: 42 LVGGGVRDLLLGREPKDFDVVTDATPAQLKKMF--RNCRLI---GRRFRLAHLHFHD-EI 95
Query: 496 FEVTTLR 516
EV T R
Sbjct: 96 IEVATFR 102
>UniRef50_A5EWQ4 Cluster: Poly(A) polymerase PcnB; n=1;
Dichelobacter nodosus VCS1703A|Rep: Poly(A) polymerase
PcnB - Dichelobacter nodosus (strain VCS1703A)
Length = 430
Score = 46.4 bits (105), Expect = 6e-04
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +1
Query: 250 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 429
S+F I + + + +E + GG +RD L+ PKD D AT A PEE+ +F
Sbjct: 22 SVFDRRAIAICRQLHEAGYEAYLVGGCLRDTLLQQPPKDFDIATNARPEEIAALF--RNC 79
Query: 430 RMINVNGERHGTITARINDKENFEVTTLR------IDMVTDGRFADVQFTKDWKLDANRR 591
R+I R + ++ EV T R + DG + + D RR
Sbjct: 80 RLIG----RRFRLAHLHYGRDIIEVATFRASADEQVKTDADGHVLEDNHYGTMEEDVLRR 135
Query: 592 DLTINSMF 615
D INS++
Sbjct: 136 DFIINSLY 143
>UniRef50_A4M1T5 Cluster: Polynucleotide adenylyltransferase region;
n=4; Desulfuromonadales|Rep: Polynucleotide
adenylyltransferase region - Geobacter bemidjiensis Bem
Length = 924
Score = 46.4 bits (105), Expect = 6e-04
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Frame = +1
Query: 178 SKMDLNLKCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLT 357
S+ L +K RE ++ P+ ++ DL ++ D+ + GG VRDLL+ +
Sbjct: 485 SRDALQVKSREVEALMNKHLPQRTTVILH---DLGRVGDQLDLTVYAVGGFVRDLLLDIQ 541
Query: 358 PKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRID-MVTD 534
D+D E F ++ + + ++ GT D +V + R++ V+
Sbjct: 542 NMDIDVTVDGDGILFAETFASQFGCRVK-SHQKFGTAVIVFPDGFKIDVASTRLEYYVSP 600
Query: 535 GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
G V+ K+D RRD T+N++ + +G +
Sbjct: 601 GALPTVE-RSSLKMDLYRRDFTVNTLAIALNGDSF 634
>UniRef50_Q747L5 Cluster: PolyA polymerase; n=4;
Desulfuromonadales|Rep: PolyA polymerase - Geobacter
sulfurreducens
Length = 455
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
+ GG VRDLL+G PKD D AT ATP ++K +F
Sbjct: 40 LVGGCVRDLLLGREPKDFDVATDATPNQIKRIF 72
>UniRef50_Q0AB71 Cluster: Poly(A) polymerase; n=1; Alkalilimnicola
ehrlichei MLHE-1|Rep: Poly(A) polymerase -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 479
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 208 ENPIVIKVDSPEF-KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATT 384
+NP ++ D ++ +E + + + + GG VRDL +G PKD D AT
Sbjct: 35 DNPAIVPRDQHRISRADISENALKVLYRLKNAGYGAYLVGGGVRDLSLGHEPKDFDVATD 94
Query: 385 ATPEEMKEMF 414
A PEE++E+F
Sbjct: 95 ARPEEVRELF 104
>UniRef50_A4RUG6 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 525
Score = 44.8 bits (101), Expect = 0.002
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Frame = +1
Query: 265 EVID-LKKIFDKYKHEI--RIAGGAVRDLLMGLTPKDLDFA-TTATPEEMKEMFTAE-EV 429
EV D L + + +K ++ R+AGG VRD L+G D+D A T +E E A E
Sbjct: 32 EVFDTLLAVVEHFKLDVTLRVAGGWVRDKLVGRESDDIDVALDTMLGKEFAEKVNAYLEA 91
Query: 430 RMINVNGERHGTITARINDKENFEVTTLRI-----DMVT--------DGRFADVQFTKDW 570
+ + G G I + ++ E T+R+ D+V D R ++QF
Sbjct: 92 QGMETKG--IGVIQSNPEQSKHLETATMRVRDVWLDLVNLRSENYSEDSRIPEMQFGTA- 148
Query: 571 KLDANRRDLTINSMF 615
K DA RRDLTIN++F
Sbjct: 149 KDDAFRRDLTINALF 163
>UniRef50_A6GB74 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 853
Score = 44.4 bits (100), Expect = 0.002
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN---- 483
I GGA RD+L GL P D+DFA+T + + + N + + R N
Sbjct: 625 IVGGATRDILRGLNPADIDFASTMPAIDSFNAIVEQGLARKNADPNDPNDLAIRRNVPFG 684
Query: 484 --DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDG 630
E T L I DG A ++ LDA RD TIN+++ DG
Sbjct: 685 SVQVEADIETGLDIISTHDGHDASLRL----DLDALARDFTINAVYYDIDG 731
>UniRef50_A6Q8W0 Cluster: Polynucleotide
adenylyltransferase/metal-dependent phosphohydrolase;
n=1; Sulfurovum sp. NBC37-1|Rep: Polynucleotide
adenylyltransferase/metal-dependent phosphohydrolase -
Sulfurovum sp. (strain NBC37-1)
Length = 485
Score = 44.0 bits (99), Expect = 0.003
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFAT--TATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
+ + GGAVRD++MG KD D T +E++ + + + ++ G+ G + RI
Sbjct: 25 VLLVGGAVRDMVMGQDVKDYDIEVYGLTTLDELESVLS--KFGSVSQVGKHFGIVKLRIG 82
Query: 484 DKE---NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
D E +F T + G ++ D+K A+RRD TIN+ +G++ Y
Sbjct: 83 DVEYDFSFPRTERKTGRGHTGFEVEIDGMLDFKEAAHRRDFTINA--IGYNIKTY 135
>UniRef50_A2DV13 Cluster: PolyA polymerase family protein; n=1;
Trichomonas vaginalis G3|Rep: PolyA polymerase family
protein - Trichomonas vaginalis G3
Length = 454
Score = 44.0 bits (99), Expect = 0.003
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Frame = +1
Query: 229 VDSPEFKSIFTEEVIDL-KKIFDKYKHEI---RIAGGAVRDLLMGLTPKDLDFATTAT-- 390
++ E + F ++VI+L KK + + + RI GG VRD L+G D+DF+ T
Sbjct: 11 LEKGELLTPFEKQVIELIKKTCESFAPQTVIARIVGGWVRDKLLGSHSDDIDFSIEGTDG 70
Query: 391 ---PEEMKEMFTAEE----VRMINVNGERH-GTITARINDKENFEVTTLR-IDMVTDGRF 543
++K++ + E V M N + H G+ + + ++ LR D TD R
Sbjct: 71 LTFANKIKKVASKAEFPDLVVMANPDQSAHIGSAKVYLTPEFYIDICGLRWDDYSTDSRI 130
Query: 544 ADVQFTKDWKLDANRRDLTINSMFLGFD 627
+ + DA RRD+TINS+FL +
Sbjct: 131 PVITVGTP-QQDAIRRDVTINSIFLNIN 157
>UniRef50_Q5WGA1 Cluster: CCA-adding enzyme; n=1; Bacillus clausii
KSM-K16|Rep: CCA-adding enzyme - Bacillus clausii
(strain KSM-K16)
Length = 376
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E I GGAVRD L+G D+D AT A+P ++ ++FT + +++N E H T+ +
Sbjct: 20 EAYIVGGAVRDYLLGKDVDDVDIATQASPHQVADIFT----KGVHINQE-HKTVLIP-GE 73
Query: 487 KENFEVTTLR 516
K E+TT +
Sbjct: 74 KGPIEITTYK 83
>UniRef50_A5UUL6 Cluster: Polynucleotide adenylyltransferase/metal
dependent phosphohydrolase; n=2; Roseiflexus|Rep:
Polynucleotide adenylyltransferase/metal dependent
phosphohydrolase - Roseiflexus sp. RS-1
Length = 459
Score = 43.6 bits (98), Expect = 0.004
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GGAVRDLL+GLTP D+D + A R +NV G G + R+++ E
Sbjct: 29 LVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGR-VNVVGRSFGVLKMRLDEYEV 87
Query: 496 FEVTTLRIDMVTD---GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
R + D G D + + RRD TIN++ L G +
Sbjct: 88 DVALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDL 137
>UniRef50_Q7XV96 Cluster: OSJNBb0039F02.3 protein; n=3; Oryza
sativa|Rep: OSJNBb0039F02.3 protein - Oryza sativa
subsp. japonica (Rice)
Length = 542
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 429
+++ + GG VRDL+M TPKD D TTA ++K+ F+ V
Sbjct: 108 YDVYLVGGCVRDLIMKKTPKDFDIITTADLRQVKDTFSGSAV 149
>UniRef50_Q6ASD5 Cluster: Related to poly(A) polymerase; n=1;
Desulfotalea psychrophila|Rep: Related to poly(A)
polymerase - Desulfotalea psychrophila
Length = 882
Score = 43.2 bits (97), Expect = 0.005
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 157 PSRRRFRSKMDLNLKCRE-NPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAV 333
P+ R+ SKM L K + N ++ + SPE ++ E + ++ D+ + GG V
Sbjct: 434 PNDRQSGSKMPLPTKRKNLNNLIHETLSPEIITLLQE----VGELADEIGFKAFAVGGFV 489
Query: 334 RDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTL 513
RDLL+ DLD + AE + E+ T T + + ++ T
Sbjct: 490 RDLLLKTANLDLDIVVEGNGIAFAKK-VAEHFKGKFFPHEKFLTATVTLPNDFKIDIATA 548
Query: 514 RIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFL 618
R++ + KLD +RRD +IN+M L
Sbjct: 549 RLEYYESPAAMPMIQLSSIKLDLSRRDFSINAMAL 583
>UniRef50_Q5KM57 Cluster: TRNA adenylyltransferase, putative; n=2;
Filobasidiella neoformans|Rep: TRNA adenylyltransferase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 504
Score = 42.3 bits (95), Expect = 0.009
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
E RIAGG VRD L+ L DLD A + + + ++ +V G + A
Sbjct: 53 ECRIAGGWVRDKLLSLPSSDLDIALSIPSGHSFAVAFVDFLKAKDVPTGSVGKVVANPEQ 112
Query: 487 KENFEVTTLRI-----DMV-------TDGRFADVQFTKDWKLDANRRDLTINSMF 615
++ E T RI D V D R V+ ++ DA+RRDLTIN++F
Sbjct: 113 SKHLETGTTRIMGLECDFVGLRSETYADSRIPQVKPGTPFE-DASRRDLTINALF 166
>UniRef50_Q2ADM5 Cluster: Polynucleotide adenylyltransferase region;
n=1; Halothermothrix orenii H 168|Rep: Polynucleotide
adenylyltransferase region - Halothermothrix orenii H
168
Length = 478
Score = 41.9 bits (94), Expect = 0.013
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +1
Query: 277 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 456
L+ I D+Y+ E+ + GGAVRD+L+ KD DF E ++E+ ++ + +
Sbjct: 19 LRDIHDRYQQELYLVGGAVRDILLQRNLKDFDF---VLKERVREV-------ALDFSSKT 68
Query: 457 HGTITARINDKENFEVTTLRIDMVTDGRFADV--QFTKDWKLDANRRDLTINSM 612
G+ +++ + V V DG D K D +RRD TINSM
Sbjct: 69 GGSFVPLDRERDIYRV-------VADGYIYDFAKMVGSTLKEDLSRRDFTINSM 115
>UniRef50_Q74CU0 Cluster: PolyA polymerase family protein; n=5;
Desulfuromonadales|Rep: PolyA polymerase family protein
- Geobacter sulfurreducens
Length = 880
Score = 41.5 bits (93), Expect = 0.017
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +1
Query: 274 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 453
DL K+ D+ + + GG VRDLL+G D+D + E A V +
Sbjct: 470 DLGKVGDELELPVYAVGGFVRDLLLGAENDDIDVSVEGDGILFAET-VANRVGCRVKSHA 528
Query: 454 RHGTITARINDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSM 612
+ GT D +V + R++ T G V+ K+D RRD TIN++
Sbjct: 529 KFGTAVIVFPDGLKVDVASTRLEYYETPGALPTVE-RSSLKMDLYRRDFTINTL 581
>UniRef50_Q3EZB5 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
thuringiensis serovar israelensis ATCC 35646|Rep: TRNA
nucleotidyltransferase - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 510
Score = 41.5 bits (93), Expect = 0.017
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Frame = +1
Query: 271 IDLKKIFDKYKH---EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 441
++L KI + K ++ + GGAVRDLL+ + PKD D+ T +E E +
Sbjct: 4 VELTKIVETLKTCNAKVYLVGGAVRDLLLDIVPKDKDYCVTGISQEGFESLFPTAM---- 59
Query: 442 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFADVQF-TKDWKL--DANRRDLTINS 609
+ G+ I D E EV R + V++G V + + D + D RRD+TINS
Sbjct: 60 LQGKDFPVYRMDI-DGELCEVALARKERKVSEGHNGFVIYASPDITIEDDLARRDITINS 118
Query: 610 MFLGFD 627
M + +
Sbjct: 119 MAIDLE 124
>UniRef50_A3DD90 Cluster: Polynucleotide adenylyltransferase region;
n=1; Clostridium thermocellum ATCC 27405|Rep:
Polynucleotide adenylyltransferase region - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 877
Score = 41.5 bits (93), Expect = 0.017
Identities = 34/122 (27%), Positives = 49/122 (40%)
Frame = +1
Query: 268 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 447
+I+ KI D + GG VRDL++G+ D+D E A+ +
Sbjct: 467 LIEAGKIADDVGLNAYVVGGFVRDLILGVENFDIDIVVEGDALMFSEKL-AQHYQAHLTK 525
Query: 448 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD 627
+R GT + D +V T R + V K D RRD TINSM + +
Sbjct: 526 HDRFGTAVVVLEDDFKIDVVTARKEYYEYPASLPVVEGGTIKDDLFRRDFTINSMAIKLN 585
Query: 628 GS 633
S
Sbjct: 586 KS 587
>UniRef50_Q5NIG4 Cluster: CCA-adding enzyme; n=12; Francisella
tularensis|Rep: CCA-adding enzyme - Francisella
tularensis subsp. tularensis
Length = 360
Score = 41.5 bits (93), Expect = 0.017
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GGAVRD+L+G+TPKD D+ E+ EM +++ + + K+
Sbjct: 5 LVGGAVRDMLLGITPKDKDWVVVGATED--EMLANGFIKI-----AANFPVFIHPQTKQE 57
Query: 496 FEVTTLRIDMVTDGRFADVQFTKDWKL--DANRRDLTINSMFLGFDGSV 636
+ + + +V F+K L D RRDLTINS+ + + V
Sbjct: 58 YALARSEKKTASGYHGFEVNFSKYITLEDDLKRRDLTINSIAIDQNNKV 106
>UniRef50_Q191T3 Cluster: Polynucleotide adenylyltransferase region
precursor; n=3; Bacteria|Rep: Polynucleotide
adenylyltransferase region precursor -
Desulfitobacterium hafniense (strain DCB-2)
Length = 873
Score = 41.1 bits (92), Expect = 0.022
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Frame = +1
Query: 130 LRGTCSVTDPSRRRFRSKMDLNLKCRENPIVIKVDSPE-FKSIFTEEVIDLKKIFDKYKH 306
+ G+ T+ S R RS L RE+ + + + PE +S+ +++ D+ +
Sbjct: 422 IHGSAVPTEMSLTRHRS-----LAMREDILGLLEELPEQIRSLLAAA----QQVADELGY 472
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
+ + GG VRD+L+ + +DLDF + V ++ GT D
Sbjct: 473 SVFVVGGFVRDILLKVPTQDLDFVIEGDGHAFARALAQRLQDVQVVFHDQFGTARLDFAD 532
Query: 487 KENFEV-TTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+ +V ++ R D + G V+ ++ + D RRD TIN+M + + Y
Sbjct: 533 GSHLDVASSRREDYSSPGALPQVEESR-LRDDMFRRDFTINAMAIAVNSVRY 583
>UniRef50_A7HLG0 Cluster: Polynucleotide adenylyltransferase region;
n=2; Thermotogaceae|Rep: Polynucleotide
adenylyltransferase region - Fervidobacterium nodosum
Rt17-B1
Length = 883
Score = 41.1 bits (92), Expect = 0.022
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
+ + GG VRDL++ + D+D E + + A+++ I V E+ T D
Sbjct: 485 VYVVGGFVRDLILNIENYDIDIVVEGNGIEFAK-YMAQQLNAIVVPYEKFFTANVIFKDG 543
Query: 490 ENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSM 612
+V T R + + G V + K D RRD TIN+M
Sbjct: 544 FKIDVATARTEYYESPGELPQVDIS-TIKKDLYRRDFTINAM 584
>UniRef50_Q9WZH4 Cluster: TRNA nucleotidyl transferase-related
protein; n=2; Thermotoga|Rep: TRNA nucleotidyl
transferase-related protein - Thermotoga maritima
Length = 863
Score = 40.7 bits (91), Expect = 0.029
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +1
Query: 277 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 456
L K D+ + + GG VRDLL+G+ D+D E E + + V ++
Sbjct: 461 LGKFGDEVNMPVYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAE-YAKRFLPGKLVKHDK 519
Query: 457 HGTITARINDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSM 612
T + + ++ T R++ + + DV+ + K D RRD TIN+M
Sbjct: 520 FMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMS-TIKKDLYRRDFTINAM 571
>UniRef50_A0BX57 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 507
Score = 40.7 bits (91), Expect = 0.029
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEE-----MKEMFTAEEVRM-------INVNGE 453
+R+AGG VRD LMG D+D E MK+ F ++ +++ +N
Sbjct: 51 LRVAGGWVRDKLMGNESHDIDITIDNMSGEQFVLKMKDYFESKNIKVSGFGVTKLNPEQS 110
Query: 454 RH-GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
+H T +I D ++ + LR + T + DA RRDLTINSMF
Sbjct: 111 KHLETACIKILD-QSIDFVNLRGETYTQNSRTPQIVVGTPEQDAFRRDLTINSMF 164
>UniRef50_Q2LST9 Cluster: Poly A polymerase; n=1; Syntrophus
aciditrophicus SB|Rep: Poly A polymerase - Syntrophus
aciditrophicus (strain SB)
Length = 495
Score = 40.3 bits (90), Expect = 0.038
Identities = 35/103 (33%), Positives = 49/103 (47%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
HE GG VRD L G+ D D T+A+PE ++ +F R + V G R G + I
Sbjct: 83 HEAWFVGGCVRDYLRGVEAGDYDIVTSASPEAIQALFP----RTVGV-GIRFGILIV-IE 136
Query: 484 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
+ + EV T R + G + + D RRD TIN+M
Sbjct: 137 NGYSHEVATYR----SPGGYLE---------DVLRRDFTINAM 166
>UniRef50_UPI00004993B2 Cluster: tRNA nucleotidyltransferase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: tRNA
nucleotidyltransferase - Entamoeba histolytica HM-1:IMSS
Length = 468
Score = 39.9 bits (89), Expect = 0.051
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKE-MFTAEEVRMINVNGERH----GTITA 474
IR+ GG VRD L+G D+D T + M+ F+ + IN N + + G I
Sbjct: 33 IRVVGGWVRDKLLGKESHDIDI----TVDNMQSYQFSQYLQKYINENTQHNVSGIGIIHK 88
Query: 475 RINDKENFEVTTLRIDMVTDG----RFADVQFTKDWKL-----DANRRDLTINSMF 615
+ ++ E TLRID + R +D + K+ DA RRD TIN+MF
Sbjct: 89 NHSAGKHLETATLRIDNIAIDICCLRASDYCDNDEEKIGTPLEDAQRRDFTINAMF 144
>UniRef50_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=5; core
eudicotyledons|Rep: AT5g23690/MQM1_4 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 527
Score = 39.9 bits (89), Expect = 0.051
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 429
H++ + GG VRDL++ TPKD D T+A E+ F E+
Sbjct: 95 HDVYLVGGCVRDLILKRTPKDFDILTSAELREVVRTFPRCEI 136
>UniRef50_Q3E7W1 Cluster: Uncharacterized protein At1g28090.1; n=4;
Arabidopsis thaliana|Rep: Uncharacterized protein
At1g28090.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 541
Score = 39.9 bits (89), Expect = 0.051
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 226 KVDSPEF---KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 396
K+D+ EF +S+ + + K ++ + GG VRDL++ PKD D TTA +
Sbjct: 84 KLDANEFGIQRSMIPDSTRMVLNKLKKKGFQVYLVGGCVRDLILDRIPKDFDVITTAELK 143
Query: 397 EMKEMF 414
E++++F
Sbjct: 144 EVRKVF 149
>UniRef50_UPI00006CBA87 Cluster: polyA polymerase family protein;
n=1; Tetrahymena thermophila SB210|Rep: polyA polymerase
family protein - Tetrahymena thermophila SB210
Length = 516
Score = 39.5 bits (88), Expect = 0.067
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFAT-TATPEEM-------------KEMFTAEEVRMINVN 447
+R AGG VRD ++G D+D T T E+ +++ + V N +
Sbjct: 35 LRSAGGWVRDKILGQECHDIDITLDTMTGEQFINLLIDYLKEKGQEDLISGHGVIKSNPD 94
Query: 448 GERH-GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
+H T+T +I + ++ LR + T R ++F + DA RRDLTINSMF
Sbjct: 95 KSKHLETVTFKIFGYD-IDIANLRHEEYTKSRIPTMKFGTPLQ-DAERRDLTINSMF 149
>UniRef50_Q3ZZE1 Cluster: PolyA polymerase family protein; n=3;
Dehalococcoides|Rep: PolyA polymerase family protein -
Dehalococcoides sp. (strain CBDB1)
Length = 418
Score = 39.5 bits (88), Expect = 0.067
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRD L+ TPKD D A + + E R ++A IN +
Sbjct: 38 LVGGLVRDFLLNKTPKDADLVLAANAIKFGQGL-LEGFNYKATLHPRFNNLSADINGFK- 95
Query: 496 FEVTTLRIDMVTD-GRFADVQFTKDWKLDANRRDLTINSMFL 618
+++T R + D G+ +V D K D RRD IN+M L
Sbjct: 96 LDISTARNEFYPDPGKLPEV-LEGDIKADLFRRDFKINAMAL 136
>UniRef50_A6DBJ0 Cluster: Putative RNA nucleotidyltransferase; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative RNA
nucleotidyltransferase - Caminibacter mediatlanticus
TB-2
Length = 352
Score = 39.5 bits (88), Expect = 0.067
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 277 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 456
LK F + + + GG VRD +G+TP + D E+ ++ + +++ G +
Sbjct: 11 LKNFFAPFTKRVYLVGGCVRDEFLGITPNEFDL-------EVYDISPQKFDKLMKKLGAK 63
Query: 457 HGTITARINDKENFEVTTLRID-MVTDG-RFADVQFTKDWKLDANRRDLTINSM 612
+ + +NF++ R + + G R +V+ +D KL + RRD T+N++
Sbjct: 64 GVGKSFFVYKWKNFDIALPRKETKIAKGHRGFEVEIIQDEKLASKRRDFTMNAL 117
>UniRef50_O97001 Cluster: Possible tRNA nucleotidyltransferase; n=3;
Leishmania|Rep: Possible tRNA nucleotidyltransferase -
Leishmania major
Length = 523
Score = 39.5 bits (88), Expect = 0.067
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Frame = +1
Query: 292 DKYKHEIRIAGGAVRDLLMGLTPKDLD----------------FATTATPEEMKEMFTAE 423
+K K +R+AGG VRD+L+GL D+D FA + ++
Sbjct: 30 NKLKATLRVAGGWVRDMLLGLHSNDIDIAIETHAGAKIVTGEAFAHRVSEYQLAHGGRGH 89
Query: 424 EVRMINVNG--ERH-GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRR 591
V +I N +H T T R+++ E+ LR D+ T + R V+ + DA RR
Sbjct: 90 TVSVIRANPALSKHIETATVRVHEIP-VELCALRTDVYTNESRIPQVRPAAPVE-DAQRR 147
Query: 592 DLTINSMF 615
D TIN++F
Sbjct: 148 DFTINALF 155
>UniRef50_Q94K06 Cluster: TRNA adenylyltransferase-like protein;
n=5; core eudicotyledons|Rep: TRNA
adenylyltransferase-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 605
Score = 39.1 bits (87), Expect = 0.088
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFAT-----TATPEEMKEMFTA--EEVR---MINVNGER 456
++R+AGG VRD L+G D+D A + ++ KE ++ EEV+ +I N ++
Sbjct: 109 QLRVAGGWVRDKLLGKESDDIDIAIDNMSGSEFLDKFKEYLSSRDEEVQGDTVIERNPDQ 168
Query: 457 HGTI-TARINDKENF-EVTTLRIDMVTD-GRFADVQFTKDWKLDANRRDLTINSMF 615
+ TA++ + + + LR + T+ R ++F K DA RRDLTINS+F
Sbjct: 169 SKHLETAKLRIYDQWIDFVNLRSEEYTENSRIPTMKFGTA-KDDAFRRDLTINSLF 223
>UniRef50_Q30UP5 Cluster: Polynucleotide adenylyltransferase region;
n=1; Thiomicrospira denitrificans ATCC 33889|Rep:
Polynucleotide adenylyltransferase region -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 411
Score = 38.7 bits (86), Expect = 0.12
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Frame = +1
Query: 271 IDLKKIFDKY-KHEIR--IAGGAVRDLLMGLTPKDLDFAT--TATPEEMKEMFTAEEVRM 435
I L IF+K H I I GG +RD L+ L KD+D ++ E ++E+ EE
Sbjct: 6 IALDAIFNKLIMHNITPIIVGGFIRDSLLFLESKDIDIEVYGVSSFEILEEIL--EEFGK 63
Query: 436 INVNGERHGTITAR-INDKENFEVTTLRIDMVTDGRFADVQ--FTKDWKLDANRRDLTIN 606
IN+ G+ G + +F + + + + R +V+ + D+K +RRD TIN
Sbjct: 64 INIVGKSFGVCKLMFVGYDLDFSLPRMDNKISSGHRGFNVKTYYKLDFKTATSRRDFTIN 123
Query: 607 SMFLGFD 627
S +G+D
Sbjct: 124 S--IGYD 128
>UniRef50_Q4U9X9 Cluster: Cardiolipin synthetase, putative; n=2;
Theileria|Rep: Cardiolipin synthetase, putative -
Theileria annulata
Length = 486
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 639 VNRSIKP*KHRIYSKVSSVSIKFPIFSELNICKTSIGNHINP*GGYLKILLVVNSSS 469
+N SI P R + K+ + K LNICK+S+G + GGY+ + + +N S
Sbjct: 155 LNNSIGPVTFRNHKKLLIIDQKTAYCGSLNICKSSVGEDLGGDGGYIDVNVRINGPS 211
>UniRef50_Q10S77 Cluster: PolyA polymerase family protein,
expressed; n=3; Oryza sativa|Rep: PolyA polymerase
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 558
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEM 411
+ GG VRDLL+ PKD D TTA+ +++K+M
Sbjct: 101 LVGGCVRDLLLKRAPKDFDVITTASLQQIKKM 132
>UniRef50_Q97HE9 Cluster: TRNA nucleotidyltransferase family enzyme;
n=1; Clostridium acetobutylicum|Rep: TRNA
nucleotidyltransferase family enzyme - Clostridium
acetobutylicum
Length = 393
Score = 37.9 bits (84), Expect = 0.20
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 274 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATP-EEMKEMFTAEEVRMINVNG 450
D+K+ + K + I GGAVRD ++ + KD+D P +KE+ + ++ V
Sbjct: 17 DIKRACKEKKIKAYIIGGAVRDSILNVKSKDIDVCVEGDPLIIIKELKSLKDY----VYY 72
Query: 451 ERHGTITARINDKENFEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSM 612
E+ T T N+ + ++ R + + DG V+ K D RRD T+N++
Sbjct: 73 EKFQTSTIYFNNGVSVDLIRCRKETYLKDGMLPIVE-PSSIKDDIYRRDFTVNAL 126
>UniRef50_Q7NKM4 Cluster: Gll1453 protein; n=1; Gloeobacter
violaceus|Rep: Gll1453 protein - Gloeobacter violaceus
Length = 582
Score = 37.9 bits (84), Expect = 0.20
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEE------MKEMFTAEEVRMINVNGERHGTITAR 477
+ GGAVRDLL+G T DLD E + AE+ + E++ T
Sbjct: 190 LVGGAVRDLLLGETSSDLDVVVEGRGGEAGAAPALARAIAAEDATLRLECFEKYQTAALI 249
Query: 478 INDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSMFLGFDG 630
D ++ T R + G +V+ + +LD RRD TIN+M + +G
Sbjct: 250 WPDGFVLDLATARTEFYPRPGANPEVE-SASIRLDLYRRDFTINAMAVCLNG 300
>UniRef50_Q3AAR6 Cluster: PolyA polymerase family protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: PolyA
polymerase family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 864
Score = 37.5 bits (83), Expect = 0.27
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRDLL+G KDLD + + + + ER T + + + +
Sbjct: 478 LVGGIVRDLLLGHKQKDLDIVVEGDALVLAQEVGKTLSAIKFIPHERFKTASIILKNGQK 537
Query: 496 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
+ +T R++ + D RRD TINSM
Sbjct: 538 IDFSTSRVEFYQHPAALPEVEVSTIREDLYRRDFTINSM 576
>UniRef50_A5UX62 Cluster: Polynucleotide adenylyltransferase region;
n=2; Roseiflexus|Rep: Polynucleotide adenylyltransferase
region - Roseiflexus sp. RS-1
Length = 874
Score = 37.1 bits (82), Expect = 0.36
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
I GGAVRD+++ TP DLD + E AE + + GT T + +E
Sbjct: 473 IVGGAVRDMILQRTPDDLDLVVEGDAIGLAEALAAELNGTVRSHA-AFGTATLTLAREEG 531
Query: 496 FEVTTLRIDMV------TDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
TL M DV+ + D +RRD TIN++ + + + Y
Sbjct: 532 QAPLTLDFVMARTEFYERPSALPDVE-AASLRHDLHRRDFTINTLAICLNPTRY 584
>UniRef50_A4M1Z2 Cluster: Metal dependent phosphohydrolase; n=1;
Geobacter bemidjiensis Bem|Rep: Metal dependent
phosphohydrolase - Geobacter bemidjiensis Bem
Length = 399
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 268 VIDLKKIFDKYKHE-IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEM 411
++ LKK F H I + GG VRD L+G+ +D+D A T E+ +
Sbjct: 5 ILRLKKFFPASLHSRIFLTGGMVRDFLLGVACQDVDLAAAVTAAELASL 53
>UniRef50_A3LSZ1 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 559
Score = 37.1 bits (82), Expect = 0.36
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Frame = +1
Query: 292 DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 471
+K+ E+RI GG VRD L+G D+D A E E +R+ N T
Sbjct: 35 NKFPLELRITGGWVRDKLLGNHSNDIDIAVNHQSGEQFASNLHEYLRVHNPELHLKAIHT 94
Query: 472 ARINDKENFEVTT-------LRIDMVT--------DGRFADVQFTKDWKLDANRRDLTIN 606
+ N +++ + T + ID V D R ++F + DA RRD T+N
Sbjct: 95 IKKNPEKSKHLETCTTKLFGMDIDFVNLRSEEYSDDSRVPIIKFGTP-EEDAYRRDATLN 153
Query: 607 SMFLGFD 627
S+F +
Sbjct: 154 SLFFNLN 160
>UniRef50_Q8A6B0 Cluster: TRNA nucleotidyltransferase; n=10;
Bacteroidetes|Rep: TRNA nucleotidyltransferase -
Bacteroides thetaiotaomicron
Length = 502
Score = 36.7 bits (81), Expect = 0.47
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Frame = +1
Query: 220 VIKVDSPEFKSIFTEEVID-LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 396
+I++ E K F+E + + + D E + GG VRD+ + KD+D +
Sbjct: 26 MIELTQEELKQYFSEPIFGHIAETADALGLECYVVGGYVRDIFLQRPSKDIDVVVVGSGI 85
Query: 397 EMKEMFTAEEVRMINVN-GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWK 573
M E R V+ + GT + E V + D R V+ +
Sbjct: 86 AMAEALGKRLGRGAYVSVFKNFGTAQVKYKGTEVEFVGARKESYQRDSRKPIVE-DGTLE 144
Query: 574 LDANRRDLTINSM 612
D NRRD TIN+M
Sbjct: 145 DDQNRRDFTINAM 157
>UniRef50_A5G663 Cluster: Polynucleotide adenylyltransferase region;
n=1; Geobacter uraniumreducens Rf4|Rep: Polynucleotide
adenylyltransferase region - Geobacter uraniumreducens
Rf4
Length = 450
Score = 36.7 bits (81), Expect = 0.47
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 414
+ GG VRDLL+G KDLDFA T E+ F
Sbjct: 30 LVGGGVRDLLLGRRLKDLDFALTGACAELPRRF 62
>UniRef50_A5K4L8 Cluster: tRNA nucleotidyltransferase, putative;
n=1; Plasmodium vivax|Rep: tRNA nucleotidyltransferase,
putative - Plasmodium vivax
Length = 689
Score = 36.7 bits (81), Expect = 0.47
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Frame = +1
Query: 277 LKKIFDKYKHE--IRIAGGAVRDLLMGLTPKDLDFAT-----TATPEEMKEMFTAEEVR- 432
L+K+ + YK + +R+ GG VRD +G++ D+D + +KE +E +
Sbjct: 61 LQKVNETYKLQCTLRVVGGWVRDKFLGISNDDIDLTVDNMKGSEFCNYIKEYIQEKEKKN 120
Query: 433 ----MINVNGERHGTITARINDKENF--EVTTLRIDMVT-DGRFADVQFTKDWKLDANRR 591
+I +N ++ + + NF +V LR + T D R ++ + DA RR
Sbjct: 121 FNFGIIKINSDQSKHLETSSFNLFNFQVDVVNLRNEKYTEDSRIPEIIIGTP-EEDALRR 179
Query: 592 DLTINSMF 615
D T+N++F
Sbjct: 180 DFTVNALF 187
>UniRef50_Q2LR14 Cluster: TRNA nucleotidyltransferase; n=1;
Syntrophus aciditrophicus SB|Rep: TRNA
nucleotidyltransferase - Syntrophus aciditrophicus
(strain SB)
Length = 875
Score = 36.3 bits (80), Expect = 0.62
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRD++M + D+D + ++ + E++ T R+
Sbjct: 480 LVGGIVRDMVMRIENLDVDLVVEGDGIIFAKALAEAFGGKVSPH-EKYKTAVVRLPGGRR 538
Query: 496 FEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSM 612
++ T R++ G F +V+ KLD RRD TIN+M
Sbjct: 539 IDLATARLEYYRMPGAFPEVE-ESTLKLDLYRRDFTINTM 577
>UniRef50_Q0AVZ3 Cluster: TRNA nucleotidyltransferase; n=2;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
TRNA nucleotidyltransferase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 437
Score = 36.3 bits (80), Expect = 0.62
Identities = 30/103 (29%), Positives = 44/103 (42%)
Frame = +1
Query: 304 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
++ I G +RD L+G P + D T A P +F E + E +G +T
Sbjct: 21 YQAYIYGACIRDYLLGKEPINWDITTNALPNNTVVIFDENEGFTSIPSVEDYGIVTLHFK 80
Query: 484 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
E+ +V T R RFAD D D +D T+NS+
Sbjct: 81 G-ESCQVNTFRTGEAR--RFAD-----DISEDLLHKDFTMNSI 115
>UniRef50_Q63YC3 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=33; Bacteria|Rep: Multifunctional CCA
protein [Includes: CCA-adding enzyme (EC 2.7.7.25) (EC
2.7.7.21) (tRNA nucleotidyltransferase) (tRNA
adenylyl-/cytidylyl- transferase) (tRNA
CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-);
Phosphatase (EC 3.1.3.-)] - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 413
Score = 36.3 bits (80), Expect = 0.62
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 483
+I GGA+RD L+GL +D D+ ATPE+M A+ R + + ++
Sbjct: 2 KIYAVGGAIRDALLGLPVRDRDYVVVGATPEQM----AAQRFRPVGKD------FPVFLH 51
Query: 484 DKENFEVTTLRIDMVTDGRFADVQF--TKDWKL--DANRRDLTINSM 612
+ E R + T + QF D L D RRDLTIN+M
Sbjct: 52 PDTHEEYALARTERKTAAGYHGFQFYYAPDVTLEQDLVRRDLTINAM 98
>UniRef50_A0XYS5 Cluster: TRNA nucleotidyl transferase; n=2;
Alteromonadales|Rep: TRNA nucleotidyl transferase -
Alteromonadales bacterium TW-7
Length = 417
Score = 35.9 bits (79), Expect = 0.82
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTA-TPEEMKEMFTAEEVRMINVNGERHGTITARIND 486
+ + GGAVRD L+ + KD D+ TP M E + + + + + + +
Sbjct: 8 VYLVGGAVRDKLLNIASKDNDYVVIGETPSTM------ESLGFLPIGSDFPVYLHPKTKE 61
Query: 487 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
+ T + G D + + D RRDLTINSM L +G +
Sbjct: 62 EYALGRTERKSGKGYTGFVVDASPSVTLEEDLARRDLTINSMALDENGKI 111
>UniRef50_Q6CSU9 Cluster: Similarity; n=2; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 489
Score = 35.9 bits (79), Expect = 0.82
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLDFA-TTATPEEMKEMFTA---------EEVRMINVNGERH- 459
RI GG VRD L+G DLD A T E+ E A + I+ N +
Sbjct: 42 RITGGWVRDKLLGNDSNDLDIAINNMTGEQFAEKLCAFLQDRGLETHSLHTIDKNPSKSK 101
Query: 460 --GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMF 615
T T ++ D + LR + T + R V+F + DA RRD T+N+MF
Sbjct: 102 HLETCTTKLFDVP-VDFVNLRSEEYTMESRIPKVEFGTPYD-DAMRRDATLNAMF 154
>UniRef50_P45269 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=17; Gammaproteobacteria|Rep:
Multifunctional CCA protein [Includes: CCA-adding enzyme
(EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)] - Haemophilus influenzae
Length = 416
Score = 35.9 bits (79), Expect = 0.82
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHG-TITARIN 483
++ + GGAVRD L+GL KD D+ A+ ++++ ++ G +N
Sbjct: 2 KVYLVGGAVRDQLLGLPVKDRDWIVVG----------ADPATLLSLGYQQVGKDFPVFLN 51
Query: 484 DKENFEVTTLRIDMVTD----GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV 636
K E R + + G D T + D RRDLTIN+M DG +
Sbjct: 52 PKTKEEYALARTERKSSAGYTGFICDFSPTITLEQDLIRRDLTINAMAQSEDGEI 106
>UniRef50_A3JBM7 Cluster: Fused tRNA nucleotidyl
transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase
and phosphatase; n=3; Alteromonadales|Rep: Fused tRNA
nucleotidyl transferase/2'3'-cyclic
phosphodiesterase/2'nucleotidase and phosphatase -
Marinobacter sp. ELB17
Length = 386
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM 402
+I + GGAVRD L+GL KD D+ ATPE M
Sbjct: 6 DIYLVGGAVRDQLLGLPVKDRDWVVVGATPETM 38
>UniRef50_Q54BQ2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 558
Score = 35.5 bits (78), Expect = 1.1
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 489
+R+AGG VRD L G D+D E + + + R G I +
Sbjct: 95 LRVAGGWVRDKLRGDDSNDIDITLDNMMGEAFAELVNKHLSSKHHQTHRIGVIQSNPEQS 154
Query: 490 ENFEVTTLRI-DMVTDG-RFADVQFTKDWKL----------DANRRDLTINSMFLGFD 627
++ E T+++ DM D +T ++ DA RRDLTINS+F +
Sbjct: 155 KHLETATVKVFDMWIDFVNLRSESYTDTSRIPVISIGTPLQDALRRDLTINSLFFNIN 212
>UniRef50_Q5AME1 Cluster: Potential tRNA CCA-pyrophosphorylase; n=3;
Saccharomycetales|Rep: Potential tRNA
CCA-pyrophosphorylase - Candida albicans (Yeast)
Length = 547
Score = 35.5 bits (78), Expect = 1.1
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM-----------KEMFTAEEVRMINVNG 450
E+RI GG VRD L+G D+D A T EE + + V I +N
Sbjct: 54 ELRITGGWVRDKLLGNESHDIDIAVNHLTGEEFVNGLHDYLRQHEPELSMNHVHTIKMNP 113
Query: 451 ERH---GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMF 615
E+ T T ++ + + LR + T D R ++F + DA RRD T+N++F
Sbjct: 114 EKSKHLETCTTKLFGVD-IDFVNLRSEEYTHDSRVPSIEFGTP-EQDAVRRDATLNALF 170
>UniRef50_Q820V9 Cluster: CCA-adding enzyme; n=2; Coxiella
burnetii|Rep: CCA-adding enzyme - Coxiella burnetii
Length = 376
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM 402
++ + GGAVRD L+GL K+ D+ ATPEEM
Sbjct: 17 KVYLVGGAVRDQLLGLPVKEKDWVVVGATPEEM 49
>UniRef50_O66728 Cluster: Poly A polymerase; n=1; Aquifex
aeolicus|Rep: Poly A polymerase - Aquifex aeolicus
Length = 824
Score = 35.1 bits (77), Expect = 1.4
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG-ERHGTITARINDKE 492
I GG VRD+L+G D+DF E+ + +NV+ GT +I +
Sbjct: 456 IVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARR--HGVNVHPFPEFGTAHLKIGKLK 513
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
T R G + V+ K D RRD TIN+M
Sbjct: 514 LEFATARRETYPRPGAYPKVE-PASLKEDLIRRDFTINAM 552
>UniRef50_Q125I3 Cluster: Metal dependent phosphohydrolase; n=1;
Polaromonas sp. JS666|Rep: Metal dependent
phosphohydrolase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 462
Score = 35.1 bits (77), Expect = 1.4
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM 402
+I + GGAVRD LMGL +D D+ ATPE++
Sbjct: 2 QIYMVGGAVRDALMGLAVQDHDWVVVGATPEDL 34
>UniRef50_A6FG51 Cluster: Putative tRNA nucleotidyltransferase; n=1;
Moritella sp. PE36|Rep: Putative tRNA
nucleotidyltransferase - Moritella sp. PE36
Length = 386
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM 402
+I + GGAVRD L+ L KD DF ATP EM
Sbjct: 2 QIYLVGGAVRDKLLSLPVKDKDFVVVGATPAEM 34
>UniRef50_A0YS97 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 435
Score = 35.1 bits (77), Expect = 1.4
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Frame = -2
Query: 335 LTAPPAILISCLYLSKI--FFRSIT---SSVNILLNSGESTLITIGFSRHFK-FKSIFDR 174
+ PP + L K+ FR I + +N LLNSGE+ L+ I + + F+ +
Sbjct: 162 IAVPPEQAYTLLNQKKVDALFRVIALGNTGINELLNSGENRLVPIEQAAALQLFQPALEA 221
Query: 173 NLLRLGSVTLHVPLSWKNCPTPKILLHALNITKKKLQ----IKVAKLLYISRKSLTSCPP 6
+++ +G+ +P+ ++ P + L ++ IT K + ++ K+L+ SR L + P
Sbjct: 222 SIIPVGTYNGSIPIPAEDLPI--VALRSVLITHKNIDNTVIYEITKILFESRNELMTKNP 279
>UniRef50_A2FD21 Cluster: PolyA polymerase family protein; n=2;
Trichomonas vaginalis G3|Rep: PolyA polymerase family
protein - Trichomonas vaginalis G3
Length = 458
Score = 35.1 bits (77), Expect = 1.4
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Frame = +1
Query: 226 KVDSPEFKSIFTEEVIDL-KKIFDKYKHE---IRIAGGAVRDLLMGLTPKDLDFATT-AT 390
+++S E S ++VI++ KK D + +RIAGG VRD +MG D+D A + AT
Sbjct: 8 RLESGESFSQLDKDVIEIIKKTIDAISPKKVIVRIAGGWVRDKIMGRENDDIDIAISGAT 67
Query: 391 PEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTD 534
E + M++V G + N ++ + T R+ + D
Sbjct: 68 CNEFSD-------AMVSVLGPNTKRVLLEANHEQLKHIDTARVCLFHD 108
>UniRef50_UPI00015BD2D0 Cluster: UPI00015BD2D0 related cluster; n=1;
unknown|Rep: UPI00015BD2D0 UniRef100 entry - unknown
Length = 821
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/126 (20%), Positives = 56/126 (44%)
Frame = +1
Query: 250 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 429
S + ++D+K + K + ++ + GG VRD+++ D+DF + +++ + +
Sbjct: 439 SYMMDIIMDIKSVIPKGE-KLYLVGGVVRDIILNRPSYDIDFVFEGDIDLLEQSLKSHGI 497
Query: 430 RMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINS 609
+ G ++ + + E+++ R + V K D RRD TIN+
Sbjct: 498 KTHRFLG--FNSVHFKYKGFK-IEISSTRREYYEMAGAYPVVSKASLKEDLFRRDFTINT 554
Query: 610 MFLGFD 627
+ L D
Sbjct: 555 LLLSLD 560
>UniRef50_Q72BI3 Cluster: PolyA polymerase family protein; n=3;
Desulfovibrio|Rep: PolyA polymerase family protein -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 904
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +1
Query: 322 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND---KE 492
GG VRDLL+ DLD +F AE + + + + ++ ++
Sbjct: 492 GGFVRDLLLDRPNYDLDLVIEGDGVAFARVFAAEVGGRLREHAKFKTALVIFTDENGAEQ 551
Query: 493 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 639
+V T R++ K+D RRD TIN++ + DG+ +
Sbjct: 552 RVDVATARLEYYEYPAALPTVELSSIKMDLFRRDFTINALAVQLDGAQF 600
>UniRef50_Q30ZL6 Cluster: TRNA nucleotidyltransferase, putative;
n=1; Desulfovibrio desulfuricans G20|Rep: TRNA
nucleotidyltransferase, putative - Desulfovibrio
desulfuricans (strain G20)
Length = 368
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEE 399
+ GGAVRD+L+G TP++ D+ + + EE
Sbjct: 10 LVGGAVRDMLLGRTPREYDYVFSGSLEE 37
>UniRef50_Q1NUR4 Cluster: Polynucleotide adenylyltransferase
region:Metal-dependent phosphohydrolase, HD subdomain;
n=2; delta proteobacterium MLMS-1|Rep: Polynucleotide
adenylyltransferase region:Metal-dependent
phosphohydrolase, HD subdomain - delta proteobacterium
MLMS-1
Length = 509
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 301 KHEIRIAGGAVRDLLMGLTPKDLDFATTA 387
+ E+ IAGGAVRD L G +DLDF A
Sbjct: 28 QRELYIAGGAVRDWLRGCRSRDLDFTVPA 56
>UniRef50_A0Q0F2 Cluster: PolyA polymerase family protein, putative;
n=1; Clostridium novyi NT|Rep: PolyA polymerase family
protein, putative - Clostridium novyi (strain NT)
Length = 394
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 229 VDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLD 372
+D+ +FK + E + +K+ K+ I GGA+RD ++ + PKD+D
Sbjct: 4 LDNFDFKEL--EAINLIKETCSKFNANAYIVGGAIRDSILNVKPKDID 49
>UniRef50_Q8SS78 Cluster: TRNA ADENILYL TRANSFERASE; n=1;
Encephalitozoon cuniculi|Rep: TRNA ADENILYL TRANSFERASE
- Encephalitozoon cuniculi
Length = 464
Score = 34.7 bits (76), Expect = 1.9
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = +1
Query: 313 RIAGGAVRDLLMGLTPKDLD----------FATTATPEEMKEMFTAEEVRMINVNGERH- 459
R+AGG VRD +MG D+D FA + T V N +H
Sbjct: 31 RVAGGWVRDKIMGNPSFDMDIALENISGYKFAVGLVQSATGQKLTDVHVIKDNPEKSKHL 90
Query: 460 GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 615
T RIN + LR + ++ R +V+ + DA RRDLTINS+F
Sbjct: 91 ETAVVRING-FCVDFVNLRNETYSETRIPNVKPGTPQE-DAFRRDLTINSLF 140
>UniRef50_A1C7Z8 Cluster: Poly(A) polymerase; n=8;
Eurotiomycetidae|Rep: Poly(A) polymerase - Aspergillus
clavatus
Length = 635
Score = 27.9 bits (59), Expect(2) = 2.2
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 397 EMKEMFTAEEVRMINVNGERH-GTITARINDKENFEVTTLRIDMVTD-GRFADVQFTKDW 570
E+KE + N +H T+T +I + ++ LR + TD R ++F
Sbjct: 209 ELKEAIVSLHKIEANPEKSKHLETVTTKIFGLD-IDLVNLRKETYTDESRNPQMEFGTAE 267
Query: 571 KLDANRRDLTINSMFLGFDGS 633
+ DA RRD TIN++F + S
Sbjct: 268 E-DAMRRDATINALFYNLNES 287
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLD 372
+R GG VRD L+G+ D+D
Sbjct: 153 LRFTGGWVRDKLLGVDSHDID 173
>UniRef50_Q39TB4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Geobacter metallireducens GS-15|Rep: Polynucleotide
adenylyltransferase region - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 431
Score = 34.3 bits (75), Expect = 2.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE 423
+ GG +RDLLMG D+D A PE + F E
Sbjct: 30 VVGGCLRDLLMGRGVNDVDIAVGGGPEALSRRFAKE 65
>UniRef50_Q9RVP2 Cluster: TRNA nucleotidyltransferase, putative;
n=2; Deinococcus|Rep: TRNA nucleotidyltransferase,
putative - Deinococcus radiodurans
Length = 374
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLD 372
E+ + GGAVRD L+G TP DLD
Sbjct: 33 ELALVGGAVRDALLGQTPLDLD 54
>UniRef50_Q9KBJ7 Cluster: Intracellular alkaline serine protease;
n=8; Bacillaceae|Rep: Intracellular alkaline serine
protease - Bacillus halodurans
Length = 444
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 376 ATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEV 504
+ TPE ++EM +++R I +N E H + + + FEV
Sbjct: 94 SANVTPESLQEMLVCKDIRKIYLNREVHALLDTAVESAQAFEV 136
>UniRef50_A7GXZ4 Cluster: PolyA polymerase family protein; n=2;
Campylobacter|Rep: PolyA polymerase family protein -
Campylobacter curvus 525.92
Length = 383
Score = 33.9 bits (74), Expect = 3.3
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = +1
Query: 274 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 453
+++++ + + + GG VRD L+G D D E+ +++ + ++ G
Sbjct: 16 EVRRLLAPHTTRVYLVGGCVRDTLLGREIYDYDI-------EIYDIYPHKFDALMQSIGA 68
Query: 454 RHGTITARINDKENFEVTTLRIDMVTDGRFAD--VQFTKDWKLDANRRDLTINSMFLG-F 624
+ I +NF++ R + T R D V + D + RRD TIN+M + F
Sbjct: 69 SGVGKSYFIYKFKNFDLGLPRSESKTGERHKDFAVSYINDPRTACLRRDFTINAMMINIF 128
Query: 625 DGSV 636
DG +
Sbjct: 129 DGEL 132
>UniRef50_A6EHJ3 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 694
Score = 33.9 bits (74), Expect = 3.3
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = -2
Query: 431 LTSSAVNISFISSGVAVVAKS--RSFGVSPIKRSLTAPPAILISCLYLSKIFFRSITSSV 258
+T S VN + +VAK R F V+P K + +LI+ + + + T V
Sbjct: 492 ITPSVVNNLLSQTVQYLVAKDDLRKFKVTPSKNTFNENEHVLINAVLYNDSYVAVNTPDV 551
Query: 257 NILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLH 141
NI L + + + T FSR + D LL G+ T +
Sbjct: 552 NIRLKNQDGKIFTFLFSRTSAAYQL-DAGLLPAGNYTFN 589
>UniRef50_A4J0V4 Cluster: Metal dependent phosphohydrolase; n=1;
Desulfotomaculum reducens MI-1|Rep: Metal dependent
phosphohydrolase - Desulfotomaculum reducens MI-1
Length = 472
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE-EVRMINVNGERHGTITARINDKE 492
+ GGAVRDL + P DLDF TA + + T + + ++ ++ +R + + +
Sbjct: 17 LVGGAVRDLFLNKIPVDLDFCVTAKVFALAQTLTQQYQGSLVTLDDQRE--MLRVVTNSW 74
Query: 493 NFEVTTLRIDMVTDGRFA 546
+ + + LR +++ FA
Sbjct: 75 HLDFSPLRDEILEKDLFA 92
>UniRef50_A1IDZ7 Cluster: PolyA polymerase family protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: PolyA
polymerase family protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 896
Score = 33.9 bits (74), Expect = 3.3
Identities = 23/99 (23%), Positives = 38/99 (38%)
Frame = +1
Query: 316 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 495
+ GG VRDL + + +D+D F ++ ++ GT D
Sbjct: 497 VVGGFVRDLFLSRSTEDVDIVIEGDGIAFAREFAGRMKARVHYY-KKFGTAVITFADGSK 555
Query: 496 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
+V + R++ KLD RRD TIN++
Sbjct: 556 IDVASARLEYYQFPAALPTVEMSSIKLDLFRRDFTINTL 594
>UniRef50_A0RPP8 Cluster: PolyA polymerase family protein; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: PolyA
polymerase family protein - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 368
Score = 33.9 bits (74), Expect = 3.3
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +1
Query: 265 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 444
E+ LK I + GG VRD+L+G K++DF E++ + + N+
Sbjct: 15 ELSTLKNILKHRTKRAYLVGGCVRDMLLG--AKNIDFDI--------EVYDIDPFKFENI 64
Query: 445 NGERHGTITAR---INDKENFEVTTLRIDMVTD-GRFA-DVQFTKDWKLDANRRDLTINS 609
+ T + + +N++++ R + G A V + D K+ + RRD T+N+
Sbjct: 65 MHDIGATGVGKSYFVYKYKNYDISLPRTESKNGIGHKAFIVSYCNDEKIASKRRDFTMNA 124
Query: 610 MFLG-FDGSV 636
M + F+G +
Sbjct: 125 MMINIFNGEI 134
>UniRef50_A0LG26 Cluster: Polynucleotide adenylyltransferase region;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Polynucleotide adenylyltransferase region -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 888
Score = 33.9 bits (74), Expect = 3.3
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +1
Query: 265 EVIDLKKIFDKYKHEIRI----AGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 432
E++ K F K ++ + GG VRDLL+ + D+D E + E
Sbjct: 463 EIVQTLKDFGKLAKDLGMKAYAVGGFVRDLLLRRSNLDIDIVVEGDGIEFARTYAREHGI 522
Query: 433 MINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 612
+ ++ T D +V + R + + K+D RRD TIN++
Sbjct: 523 RCRFH-KKFNTAVLIFPDDRRVDVASARFEYYQYPAALPIVEFSSLKMDLYRRDFTINTL 581
Query: 613 FLGFD 627
L +
Sbjct: 582 ALALN 586
>UniRef50_Q00SN8 Cluster: Polynucleotide adenylyltransferase family
protein; n=1; Ostreococcus tauri|Rep: Polynucleotide
adenylyltransferase family protein - Ostreococcus tauri
Length = 596
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 295 KYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 402
+ + ++ + GGAVRD G +D+D AT A+ EE+
Sbjct: 116 RLREDVYVVGGAVRDWASGREARDIDLATRASWEEI 151
>UniRef50_Q22BM8 Cluster: HAD-superfamily hydrolase, subfamily IIA
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: HAD-superfamily hydrolase, subfamily IIA
containing protein - Tetrahymena thermophila SB210
Length = 321
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +1
Query: 373 FATTATPEEMKEMFTAEEVRMINVNGERH----GTITARIND--KENFEVTTLRIDMVTD 534
+A+ E + F +E+ +I R+ GT+T + +E F + +I++
Sbjct: 168 YASLLMQENKAQFFASEDTPLIKFRNGRYMPSVGTLTQSLTYGLREKFPNSVQKINLSKP 227
Query: 535 GRFADVQFTKDWKLDANR 588
+A +QF KD+KL+ N+
Sbjct: 228 SEYALLQFVKDFKLELNK 245
>UniRef50_A4RHL3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 524
Score = 33.9 bits (74), Expect = 3.3
Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 25/127 (19%)
Frame = +1
Query: 310 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN--VNGERHG------- 462
+R AGG VRD L+G D+D A + E FT E V N N +RHG
Sbjct: 65 LRWAGGWVRDKLLGTESHDIDVAISCM---TGEAFTRELVAFCNDAANRDRHGISEGDIG 121
Query: 463 ---TITARINDKENFEVTT-----LRIDMVT--------DGRFADVQFTKDWKLDANRRD 594
+ A + ++ E T L +D V D R ++F + DA RRD
Sbjct: 122 NLHKVAANPDKSKHLETVTTRMFGLEVDFVNLRKETYTEDSRNPQMEFGTA-EEDALRRD 180
Query: 595 LTINSMF 615
T+N++F
Sbjct: 181 ATVNALF 187
>UniRef50_Q7U391 Cluster: CCA-adding enzyme; n=4; Bordetella|Rep:
CCA-adding enzyme - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 364
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM 402
++ I GGAVRD L+GL D D+ ATPE+M
Sbjct: 13 QVYIVGGAVRDGLLGLPAGDRDWVVVGATPEDM 45
>UniRef50_Q1VKP5 Cluster: Poly(A) polymerase; n=1; Psychroflexus
torquis ATCC 700755|Rep: Poly(A) polymerase -
Psychroflexus torquis ATCC 700755
Length = 61
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 256 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFAT 381
F EE+I K K H+ + GG +RD L+ + KD D AT
Sbjct: 23 FAEEII---KQLQKNGHDAYLVGGCIRDQLIDIPAKDFDVAT 61
>UniRef50_Q1JYT1 Cluster: Polynucleotide adenylyltransferase region;
n=1; Desulfuromonas acetoxidans DSM 684|Rep:
Polynucleotide adenylyltransferase region -
Desulfuromonas acetoxidans DSM 684
Length = 422
Score = 33.1 bits (72), Expect = 5.8
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 244 FKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE 423
F++ + L+ + + I + GGA+RD L+G +D+D T P + + F+ +
Sbjct: 3 FRTPSIPHLATLQHLSQHHALPIYVVGGALRDALLGHACQDIDLITPGDPTPIAQAFSKQ 62
Query: 424 E 426
+
Sbjct: 63 Q 63
>UniRef50_A7AY03 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 568
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +1
Query: 208 ENPIVIKVDSPEFKSIFTEEVIDLKK-IFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATT 384
+N I++ + F + ID + +F RIAG + + G P+ D+ +
Sbjct: 90 QNHSTIQLSGKQVMIGFLDTGIDYQNPVFQHLDKTTRIAGIWDQTIQSGTPPESFDYGSH 149
Query: 385 ATPEEMKEMFTAEEVRMI--NVNGERHGTITARI 480
TP+ + E +E+ + +V+ HGT A I
Sbjct: 150 YTPDMINEALASEDPYSLVPSVDNNGHGTFLASI 183
>UniRef50_Q9Y7U9 Cluster: ATP(CTP) tRNA nucleotidyltransferase; n=1;
Schizosaccharomyces pombe|Rep: ATP(CTP) tRNA
nucleotidyltransferase - Schizosaccharomyces pombe
(Fission yeast)
Length = 484
Score = 33.1 bits (72), Expect = 5.8
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLD 372
E+R+AGG VRD L+GL+ DLD
Sbjct: 36 EVRLAGGWVRDKLLGLSSDDLD 57
>UniRef50_Q5V3G1 Cluster: Cell surface glycoprotein related protein;
n=1; Haloarcula marismortui|Rep: Cell surface
glycoprotein related protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 1355
Score = 33.1 bits (72), Expect = 5.8
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 385 ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTL---RIDMVTDGRFA 546
+T E FTA I+++GER GT+ R+++ FE TT+ R D+VT A
Sbjct: 587 STTVSFTEPFTAVGTYAIDLDGERVGTV--RVSESATFETTTVDLNRTDVVTGAPIA 641
>UniRef50_UPI00003837A2 Cluster: hypothetical protein Magn03006037;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03006037 - Magnetospirillum
magnetotacticum MS-1
Length = 151
Score = 32.7 bits (71), Expect = 7.7
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 187 DLNLKCRENPIVIKV-DSPEFKSIFTEEVIDLKKI--FDKYKHEIRIAGGAVRDLLMGLT 357
DL ++P++ + PE+ S F ++ +DL + F +Y +R G ++ ++
Sbjct: 4 DLRTWLHDDPMLAAYRERPEYASEFGQDPLDLLAVAPFARYAPALRAWGLTTEQRIVAVS 63
Query: 358 PKDLDFATTATPEE 399
P DL TPEE
Sbjct: 64 PPDLAALLGTTPEE 77
>UniRef50_Q6AJ41 Cluster: Related to poly(A) polymerase; n=1;
Desulfotalea psychrophila|Rep: Related to poly(A)
polymerase - Desulfotalea psychrophila
Length = 501
Score = 32.7 bits (71), Expect = 7.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 307 EIRIAGGAVRDLLMGLTPKDLDFATTA 387
E+ +AGG VRD +G + KDLD T A
Sbjct: 46 EVWVAGGPVRDYFLGRSAKDLDLVTGA 72
>UniRef50_Q1AYV6 Cluster: SMC protein-like protein; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: SMC protein-like protein -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 955
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 415 TAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKL 576
+ E +M + GE HG + AR+ E + L I ++TDGR++ ++F ++ +
Sbjct: 777 SGELSQMDRLLGEFHGALAARLRPHLQREASAL-ISVLTDGRYSRMEFDDEYNI 829
>UniRef50_Q180L3 Cluster: Putative uncharacterized protein; n=3;
Clostridium difficile|Rep: Putative uncharacterized
protein - Clostridium difficile (strain 630)
Length = 232
Score = 32.7 bits (71), Expect = 7.7
Identities = 22/105 (20%), Positives = 47/105 (44%)
Frame = +1
Query: 280 KKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERH 459
KKI D K+ + +R+ + ++ + E+ K E +N N E+
Sbjct: 67 KKINDAIKN---LCKSEIRETTNNFSNIEIGIKNSIIEEKNKSTMLDENSTYLNTNDEKE 123
Query: 460 GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRD 594
IT N+K + +++ D + +++ KD+K D+N+++
Sbjct: 124 SLITKESNEK-------IEEEILNDEKLEELEQKKDYKEDSNKKE 161
>UniRef50_Q0G191 Cluster: Putative uncharacterized protein; n=1;
Fulvimarina pelagi HTCC2506|Rep: Putative
uncharacterized protein - Fulvimarina pelagi HTCC2506
Length = 608
Score = 32.7 bits (71), Expect = 7.7
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 160 SRRRFRSKMDLNLKCRENPIVIKVDSPEFKSI 255
S RR+R+ +DL + ENP+VI + +PE S+
Sbjct: 560 SARRYRASIDLMKRVIENPVVIALSNPEQTSL 591
>UniRef50_Q9NYW7 Cluster: Taste receptor type 2 member 1; n=24;
Eutheria|Rep: Taste receptor type 2 member 1 - Homo
sapiens (Human)
Length = 299
Score = 32.7 bits (71), Expect = 7.7
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -2
Query: 446 LTFIILTSSAVNISFISSGVAVVAKSRSFGVSPIKRSLTAPPAILISCLYLSKIFFRSIT 267
+ + +L + ++G+ VV G+ IK AP +L+SCL +S+IF +
Sbjct: 7 IIYFLLAVIQFLLGIFTNGIIVVVN----GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFI 62
Query: 266 SSVNILL 246
VN+++
Sbjct: 63 FYVNVIV 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,047,809
Number of Sequences: 1657284
Number of extensions: 10833239
Number of successful extensions: 30568
Number of sequences better than 10.0: 222
Number of HSP's better than 10.0 without gapping: 29455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30406
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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