Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0111
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9EN15 Cluster: AMV033; n=1; Amsacta moorei entomopoxvi...    40   0.082
UniRef50_P25351 Cluster: Uncharacterized membrane protein YCR023...    33   9.4  

>UniRef50_Q9EN15 Cluster: AMV033; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV033 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 429

 Score = 39.5 bits (88), Expect = 0.082
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = -3

Query: 398 IEQPTEFCTTSII*TLQTNN*VTNIIKWNISTYN*N---YCFFFVRETHFEMSRHMGTEL 228
           I  P E+     I + ++N  + NIIK+NISTY  +   YC+F +     ++  H+ +E+
Sbjct: 155 IVNPDEYIYYEFINSEKSNINMKNIIKYNISTYYDSIMFYCYFDIDINCNKIEHHISSEI 214

Query: 227 GNYKCFS 207
            NY  F+
Sbjct: 215 NNYTTFT 221


>UniRef50_P25351 Cluster: Uncharacterized membrane protein YCR023C;
           n=2; Saccharomyces cerevisiae|Rep: Uncharacterized
           membrane protein YCR023C - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 611

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +1

Query: 460 NSTGII*MIPVIYFKHIVE*K--CLVLFRTLLKSSPMSYTSIHF*IYCKKKR 609
           ++TGI     VI+   IV+    CL +FRTL+K  P+ Y  + + ++ + +R
Sbjct: 417 STTGIFGCFVVIFIFPIVDRNFDCLTIFRTLVKLYPIMYVMVPYVVFLQNER 468


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,633,208
Number of Sequences: 1657284
Number of extensions: 12466659
Number of successful extensions: 24999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24996
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)