Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120110.Seq
(826 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 160 4e-38
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 155 2e-36
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 142 7e-33
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 92 1e-17
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 91 3e-17
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 90 5e-17
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 89 2e-16
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 84 5e-15
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 77 7e-13
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 76 1e-12
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 76 1e-12
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 75 2e-12
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 72 2e-11
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 70 6e-11
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 70 6e-11
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 69 1e-10
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 66 1e-09
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 65 2e-09
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 52 2e-05
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 47 5e-04
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 46 0.001
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 46 0.002
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 45 0.003
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 44 0.004
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.011
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 40 0.057
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 40 0.057
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 40 0.100
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 40 0.100
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 40 0.100
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 40 0.100
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 40 0.100
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 40 0.100
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 40 0.100
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 40 0.100
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 40 0.100
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 40 0.100
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 40 0.100
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 39 0.13
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 39 0.13
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 39 0.13
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 39 0.17
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 38 0.30
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 38 0.30
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.30
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 38 0.40
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 37 0.53
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.53
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 37 0.70
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 37 0.70
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 36 1.2
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 36 1.2
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 35 2.8
UniRef50_Q6CGS9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 35 2.8
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 34 3.8
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 34 3.8
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 34 3.8
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 34 3.8
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 34 5.0
UniRef50_A1TSE8 Cluster: TonB-dependent receptor, plug precursor... 33 6.6
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 33 6.6
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 33 8.7
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 160 bits (388), Expect = 4e-38
Identities = 73/87 (83%), Positives = 78/87 (89%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G +CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIV
Sbjct: 110 GTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIV 169
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AGGGRIDKPILKAGRAYHKYKVKRN W
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKVKRNSW 196
Score = 109 bits (261), Expect = 1e-22
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +2
Query: 257 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGSTQANL 436
KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG
Sbjct: 28 KLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQF 87
Query: 437 FIVERK 454
RK
Sbjct: 88 VYCGRK 93
Score = 60.5 bits (140), Expect = 5e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTMCAILKRK 531
++TGQFVYCG+KATL++GNVMP+ MPEGT+ L+ K
Sbjct: 82 MHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEK 119
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMNPVEHPHGGGNHQH
Sbjct: 199 VRGVAMNPVEHPHGGGNHQH 218
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRKGA 254
MGRVIRAQRKGAGSVF +H KKRKGA
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGA 26
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 155 bits (375), Expect = 2e-36
Identities = 69/87 (79%), Positives = 78/87 (89%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G VC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AGGGRIDKPILKAGRAYHKYK KRNCW
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 98.3 bits (234), Expect = 2e-19
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2
Query: 257 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 418
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 62.1 bits (144), Expect = 2e-08
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTMCAILKRK 531
++TGQFVYCGKKA L +GNV+PVG MPEGT+ L+ K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 48.0 bits (109), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMNPVEHP GGGNHQH
Sbjct: 199 VRGVAMNPVEHPFGGGNHQH 218
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRKGA 254
MGRVIR QRKGAGSVF +H K RKGA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGA 26
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 142 bits (345), Expect = 7e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 513 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 692
C + + RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGGG
Sbjct: 90 CGKKANLQIRGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGG 149
Query: 693 RIDKPILKAGRAYHKYKVKRNCW 761
RIDKP+LKAGRAYHKYK KRNCW
Sbjct: 150 RIDKPMLKAGRAYHKYKAKRNCW 172
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2
Query: 260 LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 418
LR++D+AERHGY+KGVVKDI+HDPGRGAPLA V FRDPYK+K R E FIA EG
Sbjct: 29 LRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKVTFRDPYKYKMRTETFIATEG 81
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMNPVEHPHGGGNHQH
Sbjct: 175 VRGVAMNPVEHPHGGGNHQH 194
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRKG 251
MGRVIR+QRKG GSVF +HTK RKG
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKG 25
Score = 35.9 bits (79), Expect = 1.2
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEV 468
+YTGQF+YCGKKA L++
Sbjct: 82 MYTGQFIYCGKKANLQI 98
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E++ GD G+ ARA G +A VIG P+ +T ++LPSG + S R VGIV
Sbjct: 102 GTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIV 161
Query: 681 AGGGRIDKPILKAGRAYHKYKVK 749
AGGGRI+KP LKAG+ YH+ + K
Sbjct: 162 AGGGRIEKPFLKAGKKYHRARAK 184
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 403 HCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTM 510
+ + LY GQ V GK A+ + GN+M +G +PEGTM
Sbjct: 69 YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTM 104
Score = 37.5 bits (83), Expect = 0.40
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQ 823
VRG AM+P HPHGGG+HQ
Sbjct: 191 VRGKAMSPYAHPHGGGSHQ 209
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G VCN+EEK GD G+LAR++G F V+ H+ T++KLPS K+L S R +G+V
Sbjct: 136 GVFVCNVEEKEGDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVV 195
Query: 681 AGGGRIDKPILKAGRAYHKYK 743
AGGG+ +KP+LKAG+ Y+K+K
Sbjct: 196 AGGGKYEKPLLKAGKNYYKFK 216
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V N+E + GD G+LAR +G++A V+G +T ++LPSG K +P+ +R +GI
Sbjct: 102 GTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIP 159
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AG GRI+KPI+KAG AYHK+KVK W
Sbjct: 160 AGAGRIEKPIMKAGFAYHKWKVKARKW 186
Score = 41.1 bits (92), Expect = 0.033
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMN V+HP GGG HQH
Sbjct: 189 VRGVAMNAVDHPFGGGRHQH 208
Score = 39.5 bits (88), Expect = 0.100
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 361 LPRSIQVQDKEGALHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGT 507
L R ++ E + + +Y GQ + G A E GN++P+G +PEGT
Sbjct: 55 LARVVREDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGT 103
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/83 (50%), Positives = 56/83 (67%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G+ +CN+E K D G+ R+SG +ATV+ H +A RT V +PSG K L R +VGIV
Sbjct: 103 GFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIV 160
Query: 681 AGGGRIDKPILKAGRAYHKYKVK 749
AG GR+D+P LKAG+ YHK K +
Sbjct: 161 AGSGRVDRPWLKAGKKYHKMKTR 183
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 400 LHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEG 504
L S + G + CG A ++ GN++P+G +PEG
Sbjct: 69 LLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEG 103
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 83.8 bits (198), Expect = 5e-15
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +2
Query: 257 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGSTQANL 436
K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P++FK +KELF+ E T +
Sbjct: 28 KFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVXXEVCTPVSS 87
Query: 437 FIVERK 454
+K
Sbjct: 88 LYCGKK 93
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRKGALNF 263
MGRVIRAQRK AGSVF SHT RKG F
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKF 29
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 436 VYCGKKATLEVGNVMPVGAMPEGTMC 513
+YCGKKATL VGNV+P+ ++PEG C
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXC 113
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 76.6 bits (180), Expect = 7e-13
Identities = 36/87 (41%), Positives = 56/87 (64%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E + GD G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI
Sbjct: 106 GTQIFNVEIRPGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIA 163
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AG GR +KP+LKAG AY+K+K K W
Sbjct: 164 AGAGRDEKPLLKAGNAYYKWKAKAKKW 190
Score = 43.2 bits (97), Expect = 0.008
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQ 823
VRGVAMN V HPHGGGNHQ
Sbjct: 193 VRGVAMNAVNHPHGGGNHQ 211
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEVGNVMPVGAMPEGT 507
+YTGQ V G A GN++P+ A+PEGT
Sbjct: 78 MYTGQKVQIGPNAAPVNGNILPLYAIPEGT 107
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 257 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRK 394
+LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FRD Y +K K
Sbjct: 24 RLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFRDVYSYKLIK 69
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 189 IRAQRKGAGSVFVSHTKKRKGA 254
IR+QRKGAG VF +HTK RKGA
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGA 22
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E+ GD G+ AR++G + V+G D + VKL S + S+ R +VG+V
Sbjct: 101 GTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVV 158
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AGGG +KP+LKAG Y KYKVK W
Sbjct: 159 AGGGVTEKPLLKAGNNYWKYKVKAKKW 185
Score = 40.3 bits (90), Expect = 0.057
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 764 YVRGVAMNPVEHPHGGGNHQ 823
+VRGVAMN V HPHGGG HQ
Sbjct: 187 HVRGVAMNAVSHPHGGGLHQ 206
Score = 34.7 bits (76), Expect = 2.8
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTMCAILKR 528
L GQ + GK A + GN++ VG +PEGT+ + +++
Sbjct: 73 LVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEK 109
Score = 33.1 bits (72), Expect = 8.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 302 GVVKDIIHDPGRGAPLAVVHFRDPYKF 382
G V DI+H+PG APLA++ D KF
Sbjct: 39 GKVIDIVHNPGTNAPLALIKLDDGTKF 65
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E + GD G+ ARA G +AT+I H D RT V+LPSG + R +G++
Sbjct: 106 GVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVM 163
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
+GGG+ +KP +KAG+ Y+ + K W
Sbjct: 164 SGGGKREKPFVKAGKKYYHMRSKGGKW 190
Score = 40.3 bits (90), Expect = 0.057
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQ 823
VRGVAMN V+HP GGGNHQ
Sbjct: 193 VRGVAMNAVDHPFGGGNHQ 211
Score = 39.9 bits (89), Expect = 0.076
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 263 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGS 421
R D E+ G + G V +++HDP R AP+A V F D + L + PEG+
Sbjct: 31 RPYDEQEKKGKVVGKVVELLHDPARNAPVARVRFED-----GEERLILVPEGT 78
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V ++E GD G A +G+++ V+ H + T +K+PSG K + S R +VG+V
Sbjct: 96 GMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVV 155
Query: 681 AGGGRIDKPILKAGRAYHKYKVK 749
AGGG DKP+LKA A++K K +
Sbjct: 156 AGGGIHDKPLLKASVAHYKAKAR 178
Score = 47.6 bits (108), Expect = 4e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMNPVEH HGGGNHQH
Sbjct: 185 VRGVAMNPVEHIHGGGNHQH 204
Score = 33.1 bits (72), Expect = 8.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 373 IQVQDKEGALHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEG 504
I ++ + + S +YTGQ + G A +++GN+ + +PEG
Sbjct: 53 ISFKEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEG 96
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G VCN+E+ GD G + +++G ATV H + VKLPSG L NR M+G +
Sbjct: 104 GTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTL 161
Query: 681 AGGGRIDKPILKAGRAYHKYKVK 749
AGGG ++P + AG + +K K
Sbjct: 162 AGGGASERPFMSAGGKWRNFKAK 184
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVA HPHGGG HQH
Sbjct: 191 VRGVAQAAYVHPHGGGRHQH 210
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + LE GD G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++
Sbjct: 103 GTKIYMLENNPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVI 160
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AGGGR +KP +KAG Y+ + W
Sbjct: 161 AGGGRKEKPFVKAGNKYYWASSRNRHW 187
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 638
G VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 101 GTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +1
Query: 385 DKEGALHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTMCAILKRK 531
DKE + C+ LY+GQ++YCG KA+L +GNV+P+G PEGT+ ++ K
Sbjct: 63 DKELFI-CAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESK 110
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 299 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 418
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EG
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEG 72
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/83 (42%), Positives = 45/83 (54%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G +V N+E GD G R++G FA V+ H R +KLPSG+ + R VG+V
Sbjct: 98 GSYVYNIESSPGDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVV 154
Query: 681 AGGGRIDKPILKAGRAYHKYKVK 749
A G ID PILKAG H + K
Sbjct: 155 AASGIIDAPILKAGTHVHYLRSK 177
Score = 46.4 bits (105), Expect = 9e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMN V HPHGGGNHQH
Sbjct: 184 VRGVAMNAVNHPHGGGNHQH 203
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G VCN+E+ GD G + +++G ATV H +KLPSG L NR MVG +
Sbjct: 103 GTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTL 160
Query: 681 AGGGRIDKPILKAGRAYHKYKVK 749
AGGG ++P + AG + +++ K
Sbjct: 161 AGGGVSERPFMSAGGKWRRFRSK 183
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVA HPHGGG HQH
Sbjct: 190 VRGVAQAAYVHPHGGGRHQH 209
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/119 (30%), Positives = 61/119 (51%)
Frame = +3
Query: 372 HTSSRQGRSSSLLPKALHRPICLLWKESNS*SWKCDACWSYA*GYHVCNLEEKMGDRGRL 551
+ SS+ +SS+ P +L ++ + NS C + G V N+E + G G++
Sbjct: 267 YNSSKPSKSSASSPYSLENQFDII--DLNSKVGNCIPLANARIGTWVHNIECRPGQGGKM 324
Query: 552 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 728
RA+G +A V+ P AK ++LPSGA+K + S +GIV+ + + KAG +
Sbjct: 325 VRAAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVSNPSHGTRKLRKAGHS 381
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 390 VRGVAMNPVDHPHGGG 405
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V N+E G +L RA+G FA +I + + V+LPSG K++ S R +GIV
Sbjct: 371 GTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIV 430
Query: 681 AGGGRIDKPILKAGRA 728
+ + KAG++
Sbjct: 431 SNLNHGKRKFNKAGQS 446
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 455 VRGVAMNPVDHPHGGG 470
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRKGA 254
MGRVIR QRKGAGSVF +H K RKGA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGA 26
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 257 KLRSLDYAERHGYIKGVVK 313
+LR++D+AERHGYIKG+VK
Sbjct: 28 RLRAVDFAERHGYIKGIVK 46
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 45.6 bits (103), Expect = 0.002
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V N+E G +L RA+G FA +I + + V+LPSG K++ S R VGIV
Sbjct: 333 GTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKLIDSRCRATVGIV 392
Query: 681 AGGGRIDKPILKAGRA 728
+ + + KAG++
Sbjct: 393 SNLHHGKRKLDKAGQS 408
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 417 VRGVAMNPVDHPHGGG 432
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEVGNVMPVGAMPEG 504
+YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 48 IYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V ++E G +LARA+G +A +I A + V+LPSG +K++ S R +GIV
Sbjct: 372 GTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEKLIDSRCRATIGIV 429
Query: 681 AGGGRIDKPILKAGRA 728
+ + + KAG++
Sbjct: 430 SNPNHGARKLRKAGQS 445
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 454 VRGVAMNPVDHPHGGG 469
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = -3
Query: 722 SSFQNRFVNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIVS--NHSGEVSR 561
+S Q+ V+T+T+SNNT++ SV WQN L +RR L + T +R+ S N +V R
Sbjct: 30 TSLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+ G RG+L +A+G FA ++ +P+ K+ +KL SG + + + +G+V
Sbjct: 226 GSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEHRYVHMNCHATLGVV 285
Query: 681 AGGGRIDKPILKAGRAYHKYK 743
+ KAGR+ H+ K
Sbjct: 286 SNKEHQAISWGKAGRSRHRGK 306
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMN +HPHGGG
Sbjct: 310 VRGVAMNAFDHPHGGG 325
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.011
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRK 248
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 40.3 bits (90), Expect = 0.057
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 758 LAYVRGVAMNPVEHPHGGG 814
L VRGVAMNPV+HPHGGG
Sbjct: 198 LPVVRGVAMNPVDHPHGGG 216
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 40.3 bits (90), Expect = 0.057
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 764 YVRGVAMNPVEHPHGGG 814
+VRGVAMNPV+HPHGGG
Sbjct: 219 HVRGVAMNPVDHPHGGG 235
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 194 VRGVAMNPVDHPHGGG 209
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 194 VRGVAMNPVDHPHGGG 209
Score = 33.5 bits (73), Expect = 6.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 263 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 379
R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 37 RKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 196 VRGVAMNPVDHPHGGG 211
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 216 VRGVAMNPVDHPHGGG 231
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E G + RA+G FA +I + R++LPSGA + S R +GIV
Sbjct: 134 GTLIHNIEWNPGQGAKFVRAAGTFAQLIQKHEAT--VRLRLPSGALASINSQCRATIGIV 191
Query: 681 AGGGRIDKPILKAGRA 728
+ + KAG++
Sbjct: 192 SNENHGKRNFRKAGQS 207
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 39.5 bits (88), Expect = 0.100
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E +G G+LARA+G A +I + K +KLPSG +++ + VG V
Sbjct: 6 GTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQV 63
Query: 681 AGGGRIDKPILKAG 722
G K + +AG
Sbjct: 64 GNVGVNQKSLGRAG 77
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGV MNPV+HPHGGG
Sbjct: 88 VRGVVMNPVDHPHGGG 103
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 39.5 bits (88), Expect = 0.100
Identities = 21/70 (30%), Positives = 40/70 (57%)
Frame = +3
Query: 516 NLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGR 695
N+E G G+L R++G+ AT++ D V+LPSG ++++ + +G+++ G
Sbjct: 169 NIELVPGRGGQLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLVLENCMATIGMLSNRGH 228
Query: 696 IDKPILKAGR 725
++ I KA R
Sbjct: 229 QNRNIGKAAR 238
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 39.5 bits (88), Expect = 0.100
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -3
Query: 761 PAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHASVA*WQNLL 636
PA+ L+LV+ + QN VN +TSS++TDH+ V +LL
Sbjct: 63 PAIPLGLILVIGTAGLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 224 VRGVAMNPVDHPHGGG 239
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 39.5 bits (88), Expect = 0.100
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V N+ + G G+L R++G FATVI ++ ++L SG +++ VG+
Sbjct: 224 GTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCATVGVA 283
Query: 681 AGGGRIDKPILKAGRA 728
+ + + KAGR+
Sbjct: 284 SNPNHQYRQLGKAGRS 299
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRG+AMN EHPHGGG
Sbjct: 308 VRGLAMNAAEHPHGGG 323
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 39.5 bits (88), Expect = 0.100
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNPV+HPHGGG
Sbjct: 226 VRGVAMNPVDHPHGGG 241
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 39.5 bits (88), Expect = 0.100
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E +G G+LARA+G A +I + K +KLPSG +++ + VG V
Sbjct: 136 GTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQV 193
Query: 681 AGGGRIDKPILKAG 722
G K + +AG
Sbjct: 194 GNVGVNQKSLGRAG 207
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGV MNPV+HPHGGG
Sbjct: 218 VRGVVMNPVDHPHGGG 233
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 39.1 bits (87), Expect = 0.13
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNP++HPHGGG
Sbjct: 198 VRGVAMNPIDHPHGGG 213
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 39.1 bits (87), Expect = 0.13
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNP++HPHGGG
Sbjct: 203 VRGVAMNPIDHPHGGG 218
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 39.1 bits (87), Expect = 0.13
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNP++HPHGGG
Sbjct: 314 VRGVAMNPIDHPHGGG 329
Score = 36.3 bits (80), Expect = 0.93
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIG-HNPDAKRTRVKLPSGAKKVLPSSNRGMVGI 677
G V N+E G G++ RA+G A +I HN K ++LPSG K P +GI
Sbjct: 232 GTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN---KYAILRLPSGELKSFPLQCMATIGI 288
Query: 678 VAGGGRIDKPILKAG 722
V+ + + KAG
Sbjct: 289 VSNLNHFNTDLKKAG 303
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 38.7 bits (86), Expect = 0.17
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E G ++ RA+G A ++ P + +KLPSG K + + R +G V
Sbjct: 26 GTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKWINAKCRATIGTV 84
Query: 681 AGGGRIDKPILKAGRA 728
+ K + KAG++
Sbjct: 85 SNPSHGTKKLYKAGQS 100
Score = 37.5 bits (83), Expect = 0.40
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMNP +HPHGGG
Sbjct: 109 VRGVAMNPCDHPHGGG 124
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGV MNPV+HPHGGG
Sbjct: 220 VRGVVMNPVDHPHGGG 235
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGV MNPV+HPHGGG
Sbjct: 92 VRGVVMNPVDHPHGGG 107
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGV MNPV+HPHGGG
Sbjct: 11 VRGVVMNPVDHPHGGG 26
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 37.5 bits (83), Expect = 0.40
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G V N+E G G++ARA+G +A V+G + V++PSG +++ VG V
Sbjct: 163 GTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV 222
Query: 681 AGGGRIDKPILKAGRA 728
G + ++K G+A
Sbjct: 223 ---GLAEHELVKLGKA 235
Score = 37.1 bits (82), Expect = 0.53
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 764 YVRGVAMNPVEHPHGGG 814
+ RG AMNPV+HPHGGG
Sbjct: 246 HTRGTAMNPVDHPHGGG 262
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 37.1 bits (82), Expect = 0.53
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGG 811
VRGVAMNPV+HPHGG
Sbjct: 222 VRGVAMNPVDHPHGG 236
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.53
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGG 811
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 36.7 bits (81), Expect = 0.70
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGG 811
VRG+AMNPV+HPHGG
Sbjct: 222 VRGIAMNPVDHPHGG 236
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 36.7 bits (81), Expect = 0.70
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +3
Query: 543 GRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAG 722
G+ R++G +A V+ P+ K+ V+L SG + + +G+V+ ++ + KAG
Sbjct: 263 GKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAG 322
Query: 723 RA 728
R+
Sbjct: 323 RS 324
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMN +HPHGGG
Sbjct: 333 VRGVAMNKCDHPHGGG 348
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGG 811
VRG+AMNPV+HPHGG
Sbjct: 203 VRGLAMNPVDHPHGG 217
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G + N+E K G G+LAR++G A ++G + K V+L SG +++ ++R +G V
Sbjct: 138 GTVIHNIELKPGKGGQLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV 195
Query: 681 AGGGRIDKPILKAGRA 728
G ++ +G+A
Sbjct: 196 ---GNEQHELINSGKA 208
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/18 (88%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = +2
Query: 761 AYVRGVAM-NPVEHPHGG 811
A VRGVAM NPVEHPHGG
Sbjct: 420 AKVRGVAMMNPVEHPHGG 437
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGN 817
VRG+AMN HPHGGGN
Sbjct: 267 VRGIAMNANSHPHGGGN 283
>UniRef50_Q6CGS9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 210
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 333 VEVHLWLLYTSAIHTSSRQGRSSSLLPKALHRPICLLWKES-NS*SWKC-DACWSY 494
+ VH W+L + ++ +SS PK++ RP C + + NS WK ACW +
Sbjct: 134 IPVHAWILASRWHFFKAKLAKSSWTAPKSVSRPWCRTFMAAENSWIWKLPSACWGW 189
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 34.3 bits (75), Expect = 3.8
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
+RG AMN V+HPHGGG
Sbjct: 212 IRGAAMNAVDHPHGGG 227
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMN +HPHGGG
Sbjct: 215 VRGVAMNACDHPHGGG 230
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRGVAMN +HPHGGG
Sbjct: 402 VRGVAMNACDHPHGGG 417
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGG 811
VRGVAMNPV+HP+GG
Sbjct: 231 VRGVAMNPVDHPNGG 245
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRG AMNP +HPHGGG
Sbjct: 228 VRGSAMNPNDHPHGGG 243
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 33.9 bits (74), Expect = 5.0
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRG+ MNPV+HP+GGG
Sbjct: 223 VRGMVMNPVDHPNGGG 238
>UniRef50_A1TSE8 Cluster: TonB-dependent receptor, plug precursor;
n=1; Acidovorax avenae subsp. citrulli AAC00-1|Rep:
TonB-dependent receptor, plug precursor - Acidovorax
avenae subsp. citrulli (strain AAC00-1)
Length = 737
Score = 33.5 bits (73), Expect = 6.6
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -1
Query: 727 ALPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARAR 548
A A ++GL++R PA+I +P R LA GS T+ A + FP A
Sbjct: 55 AAAASRLGLTVRETPASIDVVP-----REMLAERGSRTVSEAAQAAVGVLAGDFPAEPAA 109
Query: 547 RPLSPIFSSRLHTWY 503
+ +S+++T Y
Sbjct: 110 FSMRGFANSQINTLY 124
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 33.5 bits (73), Expect = 6.6
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGG 814
VRG+AMN +HPHGGG
Sbjct: 339 VRGLAMNAADHPHGGG 354
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 8.7
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 513 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 647
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 33.1 bits (72), Expect = 8.7
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -1
Query: 694 RPPPA---TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT--VAKFPEARARRP 542
R PP T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,412,233
Number of Sequences: 1657284
Number of extensions: 18089438
Number of successful extensions: 49631
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 47553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49612
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71324098314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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