Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120038.Seq
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 116 8e-25
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 113 6e-24
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 108 2e-22
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 86 1e-15
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 80 5e-14
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 61 3e-08
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 51 3e-05
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 50 8e-05
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 1e-04
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 1e-04
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 46 8e-04
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 43 0.007
UniRef50_A0NRY8 Cluster: Short-chain dehydrogenase/reductase SDR... 34 4.4
UniRef50_Q5QBL6 Cluster: Cathepsin L; n=1; Culicoides sonorensis... 33 7.7
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 116 bits (278), Expect = 8e-25
Identities = 87/247 (35%), Positives = 120/247 (48%), Gaps = 3/247 (1%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 210 KMVLPIFDEDDNQFK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SFI* 389
KM L I D DN+ R++G L E + ++ V P + I
Sbjct: 60 KMSLAIPDA-DNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVL-NVQDLPLAEALII 117
Query: 390 YITTKRRLTLYATI*NIPKFHKRHATRYTQRLRNYKKHSST---TNPNTFCSRVSRDELR 560
++ + L I KF + A RY + Y S NP+ FC+ VS LR
Sbjct: 118 HMIYE-NLEKQKEICERLKFTEHFADRYKNVQKLYSNTMSVLNMANPDHFCAEVSLTSLR 176
Query: 561 FFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETG 740
F + D F + F++NL+ +AVAPE ++I TE++ RN +TCII+ TG
Sbjct: 177 QF---SNEIGNEPAQDTNFELFPKFIKNLVTKAVAPEIMKIGTEDIYIRNCSTCIINSTG 233
Query: 741 LVASVPD 761
LVA PD
Sbjct: 234 LVAD-PD 239
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+IY N E IC+ LK
Sbjct: 76 TVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHMIYENLEKQKEICERLK 135
Query: 437 YTE 445
+TE
Sbjct: 136 FTE 138
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 113 bits (271), Expect = 6e-24
Identities = 82/243 (33%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 210 KMVLPIFDEDDNQFK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SF-I 386
KMVLPI D + + RS+G L I S+ + + L P F +
Sbjct: 59 KMVLPIPDAEGTIYN-RSVGKSL-ISGTESNRVLIPTKTNYEDVLKLPSMSLPEQLIFHM 116
Query: 387 *YITTKRRLTLYATI*NIPKFHKRHATRYTQRLRNYKKH-SSTTNPNTFCSRVSRDELRF 563
Y ++ + + FH + +R+ N + TNP FC+RV+ + R
Sbjct: 117 IYDEPDKQNEICKLLQYNENFHS-DLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRS 175
Query: 564 FDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETGL 743
+ + + + +N GFL+NLI ++VAP + + RN+ATC I++ GL
Sbjct: 176 YGTAD----ETDIANVTYNAMPGFLKNLINKSVAPCTMDFPGGTINLRNAATCAINQQGL 231
Query: 744 VAS 752
VA+
Sbjct: 232 VAT 234
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
++ + L+ E R+LIP+ TNY++V L SM EQLIFH+IY+ + N IC L+
Sbjct: 75 SVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHMIYDEPDKQNEICKLLQ 132
Query: 437 YTE 445
Y E
Sbjct: 133 YNE 135
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 108 bits (259), Expect = 2e-22
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 210 KMVLPIFDEDDNQFK 254
KMVLPI+DEDDNQ+K
Sbjct: 60 KMVLPIYDEDDNQYK 74
Score = 105 bits (251), Expect = 2e-21
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +3
Query: 507 STTNPNTFCSRVSRDELRFFDVTNA-RTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQI 683
S T+P +CSRV+ D++RFFD ++ G GD +FNN GFL+NLIRRAVAPE LQI
Sbjct: 160 SLTDPQAYCSRVANDDVRFFDANVVDNNYQAGNGDTVFNNMPGFLRNLIRRAVAPETLQI 219
Query: 684 DTEELRFRNSATCIIDETGLVASV 755
D+E+LR RN TC+I+ TGLVA+V
Sbjct: 220 DSEDLRLRNCNTCVINNTGLVATV 243
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHLIY+N VN IC +LK
Sbjct: 76 TIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHLIYDNRLEVNRICASLK 135
Query: 437 YTE 445
E
Sbjct: 136 NNE 138
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 85.8 bits (203), Expect = 1e-15
Identities = 41/70 (58%), Positives = 49/70 (70%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 210 KMVLPIFDED 239
KMVLPI D D
Sbjct: 60 KMVLPIPDAD 69
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = +3
Query: 519 PNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEEL 698
PN +CSR + R + VT+ VG Q+FN FLQNLI +AV PE +QI+ EEL
Sbjct: 164 PNRYCSRPLYTDDRIWSVTD----ENNVGGQVFNEMPPFLQNLISKAVGPEIMQIENEEL 219
Query: 699 RFRNSATCIIDETGLVASV 755
RN ATC I ++GLVA V
Sbjct: 220 LLRNCATCHITQSGLVADV 238
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +2
Query: 245 SIQMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 424
++ T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+IY N+ IC
Sbjct: 72 ALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHIIYENDVERERIC 131
Query: 425 DNLKYTE 445
L+ +E
Sbjct: 132 QMLEISE 138
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 210 KMVLPIFDEDDNQFK*RSLG 269
KMVLPI D + N + R++G
Sbjct: 60 KMVLPIPDAEGNIYN-RTVG 78
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+IY+N EA +C L+
Sbjct: 76 TVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHMIYDNVEAQGAVCKALQ 135
Query: 437 YTE 445
+ E
Sbjct: 136 HNE 138
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +3
Query: 513 TNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTE 692
TNP +CS+V+ + R + + V +F + FL+NLI AVAPE + ID +
Sbjct: 162 TNPRRYCSQVNSNYARIWTTDDVN-----VAGNVFESMPPFLKNLINVAVAPEQIMIDEK 216
Query: 693 ELRFRNSATCIIDETGLVASV 755
L RN TC ID++GLVA+V
Sbjct: 217 TLVIRNCPTCNIDDSGLVANV 237
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 242 QSIQMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVI 421
Q + + + LV + R RILIP+ NYQ V N++ + AE+L+ HLIYNN A I
Sbjct: 73 QKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVLHLIYNNRTAAAEI 132
Query: 422 CDNLKYTE 445
C+ L+ E
Sbjct: 133 CNQLRQQE 140
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 203
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 204 MSKMVLPIFD 233
+ K + I D
Sbjct: 60 IEKTSIAIPD 69
Score = 37.9 bits (84), Expect = 0.27
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +3
Query: 513 TNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTE 692
T+P FCS V+ +++R F T + +N+ F++NLI VAPE L +
Sbjct: 161 TDPEAFCSVVASNDIRSFGNEADLT-------RTYNSLPPFIKNLINTLVAPEVLTLGNN 213
Query: 693 ELRFRNSATCIIDETGLVA 749
+ AT I GL A
Sbjct: 214 TFPLKACATVSITTNGLQA 232
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 45 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 206
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 207 SKMVLPIFDEDDNQ 248
K I DN+
Sbjct: 63 LKSSFRIPSGKDNK 76
Score = 36.3 bits (80), Expect = 0.83
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 570 VTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETGLVA 749
+T + +R + +N +S FL+NLI R V P + I+ ++ N TC GL
Sbjct: 173 LTTNKENRVFNNETYYNQFSPFLKNLINRLVRPITMTINNYVIKIDNVDTCNFTSDGL-- 230
Query: 750 SVPD 761
+VPD
Sbjct: 231 TVPD 234
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 49.6 bits (113), Expect = 8e-05
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 51 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 221
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 222 PIFDEDDNQFK 254
I FK
Sbjct: 62 EIPSGTGTSFK 72
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 245 SIQMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA----- 409
S ++ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 70 SFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGESATEPTGL 127
Query: 410 VNVICDNLK 436
+ +C++L+
Sbjct: 128 ITQLCESLR 136
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 227
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRI 63
Score = 39.5 bits (88), Expect = 0.089
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 516 NPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEE 695
NP +C ++R FD GV +F+ FL+NLIR V P+ + + +
Sbjct: 158 NPAIYCRPEIIRDIRSFD----NPPGNGVQTAVFDQMPPFLKNLIRLTVRPQTMTVSNTQ 213
Query: 696 LRFRNSATC-IIDETGLVAS 752
L TC ++ E GLVA+
Sbjct: 214 LLLAQVPTCDLVPERGLVAA 233
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +2
Query: 302 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 227
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEI 68
Score = 38.7 bits (86), Expect = 0.16
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 519 PNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEEL 698
P+ C + +R F + R + + F F++NLI R V P LQI + EL
Sbjct: 190 PSIICRPTREETVRTFSSNDNR--QPDENQRAFEAMPNFIKNLIMRLVRPVTLQIGSTEL 247
Query: 699 RFRNSATCIID-ETGLV 746
SATC I+ + GL+
Sbjct: 248 ILDQSATCRIEPQQGLI 264
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 75 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 239
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 240 DNQFK 254
+ FK
Sbjct: 72 NRSFK 76
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +3
Query: 558 RFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDET 737
R F A+ D+ F FLQNL++ V P L+I T L + TC +
Sbjct: 169 RLFCPPKAKMLYSYTSDESFKKLPKFLQNLVQCLVKPVKLEIGTFSLVLETANTCSFTDN 228
Query: 738 GLVASVPD 761
GL +VP+
Sbjct: 229 GL--AVPE 234
>UniRef50_A0NRY8 Cluster: Short-chain dehydrogenase/reductase SDR;
n=1; Stappia aggregata IAM 12614|Rep: Short-chain
dehydrogenase/reductase SDR - Stappia aggregata IAM
12614
Length = 270
Score = 33.9 bits (74), Expect = 4.4
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +2
Query: 215 GFAHFRRRRQSIQMTIARHLVGNKERGIKRILIPSATNY--QEVFNLNSMMQAEQLIFHL 388
G AH R+R +T LV RGI S Y + V S E++ +
Sbjct: 8 GKAHPERKRYMFDLTGQVALVTGASRGIGEAAARSLAKYGAKVVLAARSDKDIERIAGEI 67
Query: 389 IYNNEEAVNVICDNLKYTEVSQAARNALYT 478
++A V+CD Y +V +A + A+ T
Sbjct: 68 RAEGQDATAVVCDVADYDDVVKAVQTAVDT 97
>UniRef50_Q5QBL6 Cluster: Cathepsin L; n=1; Culicoides
sonorensis|Rep: Cathepsin L - Culicoides sonorensis
Length = 331
Score = 33.1 bits (72), Expect = 7.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 606 DQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATC 722
++L N G+++ +RR +APE DT+++ +N A C
Sbjct: 99 NELMTNADGWIEKPLRRQLAPESYAWDTKDVPVKNQAQC 137
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,015,186
Number of Sequences: 1657284
Number of extensions: 14813709
Number of successful extensions: 34406
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34389
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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