Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0079
(710 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56959 Cluster: PREDICTED: similar to CG7602-PA,... 221 1e-56
UniRef50_UPI00015B5F58 Cluster: PREDICTED: similar to CG7602-PA;... 218 1e-55
UniRef50_UPI0000DB6FEF Cluster: PREDICTED: similar to DNApol- CG... 208 8e-53
UniRef50_A7SBP1 Cluster: Predicted protein; n=1; Nematostella ve... 203 3e-51
UniRef50_UPI0000E48503 Cluster: PREDICTED: hypothetical protein;... 200 4e-50
UniRef50_Q9UNA4 Cluster: DNA polymerase iota; n=28; Euteleostomi... 186 6e-46
UniRef50_Q568P0 Cluster: Zgc:110185; n=2; Danio rerio|Rep: Zgc:1... 184 2e-45
UniRef50_Q0IJ37 Cluster: DNA polymerase iota; n=2; Xenopus tropi... 182 1e-44
UniRef50_Q9VHV1 Cluster: CG7602-PA, isoform A; n=2; Sophophora|R... 180 2e-44
UniRef50_Q175B7 Cluster: DNA polymerase iota; n=2; Culicidae|Rep... 170 3e-41
UniRef50_A6QW93 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q4WQ07 Cluster: DNA polymerase iota, putative; n=5; Tri... 120 4e-26
UniRef50_Q86ZI6 Cluster: Related to DNA Polymerase iota; n=2; Ne... 113 4e-24
UniRef50_UPI000023CC7C Cluster: hypothetical protein FG06286.1; ... 109 7e-23
UniRef50_A2QJ22 Cluster: Contig An04c0170, complete genome; n=1;... 109 7e-23
UniRef50_Q4PF20 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_Q2GVP2 Cluster: Putative uncharacterized protein; n=1; ... 103 6e-21
UniRef50_Q8XZ19 Cluster: DNA polymerase IV; n=46; Bacteria|Rep: ... 87 2e-19
UniRef50_Q2AFE9 Cluster: UMUC-like DNA-repair protein; n=1; Halo... 85 4e-19
UniRef50_Q4L7K8 Cluster: DNA polymerase IV; n=16; Staphylococcus... 85 6e-19
UniRef50_A7AL65 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-18
UniRef50_Q8EQ56 Cluster: DNA polymerase IV; n=61; Bacillaceae|Re... 93 6e-18
UniRef50_Q8DBI7 Cluster: DNA polymerase IV; n=68; Gammaproteobac... 92 1e-17
UniRef50_Q38C71 Cluster: DNA polymerase eta, putative; n=3; Tryp... 73 2e-17
UniRef50_Q9KPS5 Cluster: DNA polymerase IV; n=56; cellular organ... 91 2e-17
UniRef50_Q1N612 Cluster: DNA polymerase IV; n=1; Oceanobacter sp... 91 2e-17
UniRef50_A4RD58 Cluster: Putative uncharacterized protein; n=1; ... 89 8e-17
UniRef50_A6NWJ9 Cluster: Putative uncharacterized protein; n=1; ... 82 9e-17
UniRef50_UPI0000D5778B Cluster: PREDICTED: similar to CG7143-PA;... 88 2e-16
UniRef50_A7F9S4 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q4D5I0 Cluster: DNA polymerase kappa, putative; n=4; Tr... 87 3e-16
UniRef50_Q6MQV5 Cluster: DNA polymerase IV; n=4; Proteobacteria|... 87 5e-16
UniRef50_Q1E7F8 Cluster: Putative uncharacterized protein; n=1; ... 86 7e-16
UniRef50_Q0UKS6 Cluster: Putative uncharacterized protein; n=1; ... 86 9e-16
UniRef50_Q5JLR9 Cluster: Putative DNA polymerase; n=2; Oryza sat... 85 1e-15
UniRef50_Q62IX2 Cluster: DNA polymerase IV; n=32; Bacteria|Rep: ... 85 2e-15
UniRef50_Q98NW7 Cluster: DNA polymerase IV 3; n=25; Bacteria|Rep... 73 6e-15
UniRef50_Q8UJK7 Cluster: DNA polymerase IV 2; n=27; Proteobacter... 73 6e-15
UniRef50_Q0V979 Cluster: Zgc:136881; n=4; Danio rerio|Rep: Zgc:1... 83 7e-15
UniRef50_Q9I534 Cluster: DNA polymerase IV; n=8; Gammaproteobact... 83 9e-15
UniRef50_UPI000065E61F Cluster: DNA polymerase eta (EC 2.7.7.7) ... 82 2e-14
UniRef50_Q9UBT6-3 Cluster: Isoform 3 of Q9UBT6 ; n=4; Catarrhini... 82 2e-14
UniRef50_Q4P422 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q9UBT6 Cluster: DNA polymerase kappa; n=39; Tetrapoda|R... 82 2e-14
UniRef50_A2WV83 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q8REB0 Cluster: DNA polymerase IV; n=3; Fusobacterium n... 81 2e-14
UniRef50_A6DIV6 Cluster: DNA polymerase IV; n=1; Lentisphaera ar... 81 3e-14
UniRef50_A4ZYA8 Cluster: Translesion synthesis DNA polymerase et... 81 3e-14
UniRef50_Q5Q9H7 Cluster: Polymerase kappa isoform 2; n=14; Murin... 81 3e-14
UniRef50_Q83EN5 Cluster: DNA-damage-inducible protein P; n=4; Ba... 81 3e-14
UniRef50_A4VCZ3 Cluster: DNA polymerase IV / kappa; n=1; Tetrahy... 81 3e-14
UniRef50_A6QNV6 Cluster: MGC152198 protein; n=3; Eutheria|Rep: M... 80 5e-14
UniRef50_Q9PQ53 Cluster: DNA polymerase IV; n=2; Ureaplasma parv... 80 6e-14
UniRef50_Q4SL60 Cluster: Chromosome 17 SCAF14563, whole genome s... 79 8e-14
UniRef50_Q4RUQ7 Cluster: Chromosome 12 SCAF14993, whole genome s... 79 8e-14
UniRef50_Q6FFG4 Cluster: DNA polymerase IV, devoid of proofreadi... 79 8e-14
UniRef50_A2TVA1 Cluster: DNA polymerase IV; n=10; cellular organ... 79 8e-14
UniRef50_A0YE03 Cluster: DNA polymerase IV; n=1; marine gamma pr... 79 8e-14
UniRef50_Q2LU75 Cluster: DNA polymerase IV; n=1; Syntrophus acid... 79 1e-13
UniRef50_Q5FLW9 Cluster: DNA-damage-inducible protein; n=5; Lact... 75 1e-13
UniRef50_UPI00015B431D Cluster: PREDICTED: similar to ENSANGP000... 79 1e-13
UniRef50_Q1ZIG5 Cluster: DNA polymerase IV; n=2; Alteromonadales... 79 1e-13
UniRef50_Q8XK37 Cluster: DNA polymerase IV; n=29; Bacteria|Rep: ... 79 1e-13
UniRef50_A1HLX7 Cluster: DNA-directed DNA polymerase; n=1; Therm... 78 2e-13
UniRef50_Q03VU4 Cluster: Nucleotidyltransferase/DNA polymerase f... 77 3e-13
UniRef50_Q9Y253 Cluster: DNA polymerase eta; n=17; Mammalia|Rep:... 77 3e-13
UniRef50_Q6AL48 Cluster: Probable DNA-damage-inducible protein P... 77 4e-13
UniRef50_UPI0000DB6D74 Cluster: PREDICTED: similar to DNApol- CG... 77 6e-13
UniRef50_Q74H50 Cluster: ImpB/MucB/SamB family protein; n=11; Ba... 77 6e-13
UniRef50_Q11UG7 Cluster: DNA polymerase IV; n=1; Cytophaga hutch... 77 6e-13
UniRef50_Q8EWQ4 Cluster: DNA-damage repair protein MucB; n=1; My... 76 8e-13
UniRef50_Q39ZU3 Cluster: Damage-inducible protein DinP; n=1; Pel... 76 8e-13
UniRef50_Q3ABL2 Cluster: DNA polymerase IV-AMBIGUITY; n=1; Carbo... 76 1e-12
UniRef50_Q4Q8C5 Cluster: DNA polymerase kappa, putative; n=3; Le... 76 1e-12
UniRef50_Q7USY7 Cluster: DNA polymerase IV; n=1; Pirellula sp.|R... 76 1e-12
UniRef50_Q97SC7 Cluster: DNA polymerase IV; n=37; Bacilli|Rep: D... 67 1e-12
UniRef50_A0LDH9 Cluster: DNA-directed DNA polymerase; n=1; Magne... 68 1e-12
UniRef50_Q7NAR2 Cluster: UmuC/DinP-like; n=1; Mycoplasma gallise... 75 1e-12
UniRef50_A2QTI4 Cluster: Contig An09c0050, complete genome; n=6;... 75 2e-12
UniRef50_O74944 Cluster: DNA polymerase kappa; n=1; Schizosaccha... 75 2e-12
UniRef50_Q6DCL9 Cluster: Polh-prov protein; n=6; Tetrapoda|Rep: ... 75 2e-12
UniRef50_Q4Q8C4 Cluster: DNA polymerase kappa, putative; n=3; Le... 75 2e-12
UniRef50_Q6F1D8 Cluster: DNA polymerase IV; n=1; Mesoplasma flor... 74 3e-12
UniRef50_A5FSS1 Cluster: DNA-directed DNA polymerase; n=3; Dehal... 74 3e-12
UniRef50_Q7PXH4 Cluster: ENSANGP00000016819; n=2; Culicidae|Rep:... 74 4e-12
UniRef50_Q54KS3 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_O17219 Cluster: Polh (Dna polymerase eta) homolog prote... 74 4e-12
UniRef50_A7S226 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 74 4e-12
UniRef50_A0JV83 Cluster: DNA-directed DNA polymerase; n=12; Acti... 65 5e-12
UniRef50_UPI0000DB76DA Cluster: PREDICTED: similar to Rev1 CG121... 73 5e-12
UniRef50_Q73P36 Cluster: DNA polymerase IV; n=1; Treponema denti... 73 5e-12
UniRef50_Q1IRF1 Cluster: DNA-directed DNA polymerase; n=2; Acido... 73 5e-12
UniRef50_A5WGS2 Cluster: DNA-directed DNA polymerase; n=2; Psych... 73 9e-12
UniRef50_A5N2U5 Cluster: DinB; n=3; Clostridium|Rep: DinB - Clos... 73 9e-12
UniRef50_A2YGF9 Cluster: Putative uncharacterized protein; n=3; ... 72 1e-11
UniRef50_A2FMN4 Cluster: ImpB/MucB/SamB family protein; n=1; Tri... 72 1e-11
UniRef50_P75241 Cluster: Uncharacterized protein MG360 homolog; ... 71 2e-11
UniRef50_UPI00004984F2 Cluster: deoxycytidyl transferase; n=1; E... 71 3e-11
UniRef50_A7H6L7 Cluster: DNA-directed DNA polymerase; n=4; Cysto... 71 3e-11
UniRef50_A4ECH9 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_A4RBE3 Cluster: Putative uncharacterized protein; n=4; ... 71 3e-11
UniRef50_Q0AX85 Cluster: DNA-directed DNA polymerase; n=1; Syntr... 71 4e-11
UniRef50_Q5QZ82 Cluster: DinP; n=2; Idiomarina|Rep: DinP - Idiom... 70 5e-11
UniRef50_A0D236 Cluster: Chromosome undetermined scaffold_35, wh... 70 5e-11
UniRef50_P58965 Cluster: DNA polymerase IV; n=11; Clostridia|Rep... 70 5e-11
UniRef50_Q98JM5 Cluster: DNA polymerase IV 2; n=2; Mesorhizobium... 70 5e-11
UniRef50_Q41FB7 Cluster: DNA-directed DNA polymerase; n=1; Exigu... 70 7e-11
UniRef50_A1I8E9 Cluster: DNA-directed DNA polymerase; n=1; Candi... 70 7e-11
UniRef50_Q384G8 Cluster: DNA polymerase kappa, putative; n=11; T... 70 7e-11
UniRef50_Q1E8M0 Cluster: Putative uncharacterized protein; n=1; ... 70 7e-11
UniRef50_P34409 Cluster: DNA polymerase kappa; n=2; Caenorhabdit... 69 9e-11
UniRef50_A6X583 Cluster: DNA-directed DNA polymerase; n=3; Rhizo... 69 1e-10
UniRef50_A0LG84 Cluster: DNA-directed DNA polymerase; n=4; Delta... 69 1e-10
UniRef50_Q5K8U2 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q2L7B2 Cluster: REV1; n=5; Neurospora|Rep: REV1 - Neuro... 69 1e-10
UniRef50_Q9VNX1 Cluster: CG7143-PA; n=3; Sophophora|Rep: CG7143-... 69 2e-10
UniRef50_Q8G430 Cluster: DNA-damage-inducible protein P; n=4; Bi... 68 2e-10
UniRef50_Q2UN38 Cluster: Translesion DNA polymerase - REV1 deoxy... 68 2e-10
UniRef50_Q67QM6 Cluster: DinP-like DNA-damage-inducible protein;... 68 3e-10
UniRef50_A7BD32 Cluster: Putative uncharacterized protein; n=1; ... 63 3e-10
UniRef50_A7QW56 Cluster: Chromosome chr3 scaffold_199, whole gen... 67 3e-10
UniRef50_A1D906 Cluster: DNA-directed polymerase kappa, putative... 67 3e-10
UniRef50_Q8PT42 Cluster: DNA polymerase IV 2; n=4; Methanomicrob... 67 3e-10
UniRef50_A7D013 Cluster: DNA-directed DNA polymerase; n=1; Opitu... 67 5e-10
UniRef50_Q88V07 Cluster: DNA polymerase IV; n=19; Lactobacillale... 67 5e-10
UniRef50_Q8YC76 Cluster: DNA polymerase IV; n=57; Alphaproteobac... 67 5e-10
UniRef50_A7I5X9 Cluster: DNA-directed DNA polymerase; n=1; Candi... 66 6e-10
UniRef50_A1SQG1 Cluster: DNA-directed DNA polymerase; n=12; Acti... 66 8e-10
UniRef50_A1CAF9 Cluster: Sister chromatid cohesion protein (Eso1... 66 8e-10
UniRef50_A2DLM9 Cluster: ImpB/MucB/SamB family protein; n=1; Tri... 66 1e-09
UniRef50_Q2S2C0 Cluster: Putative DNA polymerase IV; n=1; Salini... 65 1e-09
UniRef50_A4INK7 Cluster: DNA polymerase IV; n=1; Geobacillus the... 65 1e-09
UniRef50_A0DAQ7 Cluster: Chromosome undetermined scaffold_43, wh... 65 1e-09
UniRef50_Q6C2B9 Cluster: Yarrowia lipolytica chromosome F of str... 65 1e-09
UniRef50_O94623 Cluster: Deoxycytidyl transferase Rev1; n=3; Sch... 65 1e-09
UniRef50_Q2FKS4 Cluster: DNA-directed DNA polymerase; n=1; Metha... 65 1e-09
UniRef50_Q2LSC9 Cluster: Nucleotidyltransferase/DNA polymerase p... 64 2e-09
UniRef50_Q1QKL2 Cluster: DNA-directed DNA polymerase; n=6; Alpha... 64 2e-09
UniRef50_Q9HQT4 Cluster: DNA polymerase IV; n=5; Halobacteriacea... 64 2e-09
UniRef50_P63988 Cluster: DNA polymerase IV 2; n=16; Corynebacter... 64 2e-09
UniRef50_A6C5Y5 Cluster: UMUC-like DNA-repair protein; n=1; Plan... 64 3e-09
UniRef50_Q5KGG8 Cluster: Eta DNA polymerase, putative; n=2; Filo... 64 4e-09
UniRef50_Q2SS65 Cluster: ImpB/MucB/SamB family protein; n=2; Myc... 63 6e-09
UniRef50_Q2RNH1 Cluster: DNA-directed DNA polymerase; n=1; Rhodo... 63 6e-09
UniRef50_A3EWL3 Cluster: Polymerase ATREV1-1105; n=8; Arabidopsi... 63 6e-09
UniRef50_Q5BYF2 Cluster: SJCHGC07422 protein; n=1; Schistosoma j... 63 6e-09
UniRef50_Q09615 Cluster: Putative uncharacterized protein rev-1;... 63 6e-09
UniRef50_A7DSF9 Cluster: DNA-directed DNA polymerase; n=1; Candi... 63 7e-09
UniRef50_UPI000050FCD1 Cluster: COG0389: Nucleotidyltransferase/... 62 1e-08
UniRef50_Q9AK82 Cluster: DNA polymerase IV; n=8; Actinomycetales... 62 1e-08
UniRef50_A1SN18 Cluster: DNA-directed DNA polymerase; n=6; Actin... 62 1e-08
UniRef50_Q7R5M9 Cluster: GLP_487_58318_60345; n=1; Giardia lambl... 62 1e-08
UniRef50_Q75EE5 Cluster: AAR136Wp; n=1; Eremothecium gossypii|Re... 53 1e-08
UniRef50_A0Y5N4 Cluster: DNA polymerase IV, devoid of proofreadi... 56 1e-08
UniRef50_UPI000023E7DE Cluster: hypothetical protein FG01035.1; ... 62 2e-08
UniRef50_Q8F8Q2 Cluster: DNA polymerase IV; n=6; Bacteria|Rep: D... 62 2e-08
UniRef50_P96022 Cluster: DNA polymerase IV; n=9; Sulfolobaceae|R... 61 2e-08
UniRef50_A7E7M1 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q0EYF1 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q010L0 Cluster: Translesion DNA polymerase-REV1 deoxycy... 60 5e-08
UniRef50_A4RF27 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_Q0AWD6 Cluster: DNA-directed DNA polymerase; n=7; Clost... 52 7e-08
UniRef50_A6GT02 Cluster: UMUC-like DNA-repair protein; n=1; Limn... 59 9e-08
UniRef50_Q0UFK5 Cluster: Putative uncharacterized protein; n=1; ... 59 9e-08
UniRef50_Q0BVN8 Cluster: DNA polymerase IV; n=3; Alphaproteobact... 59 1e-07
UniRef50_Q6CDC9 Cluster: Yarrowia lipolytica chromosome C of str... 59 1e-07
UniRef50_Q0U034 Cluster: Putative uncharacterized protein; n=4; ... 59 1e-07
UniRef50_A6Q1N4 Cluster: DNA polymerase IV; n=1; Nitratiruptor s... 58 2e-07
UniRef50_Q015N2 Cluster: DNA-directed polymerase kappa; AtPOLK; ... 58 2e-07
UniRef50_Q59Q77 Cluster: Putative uncharacterized protein REV1; ... 58 2e-07
UniRef50_Q04049 Cluster: DNA polymerase eta; n=4; Saccharomyceta... 56 2e-07
UniRef50_Q4QCF2 Cluster: DNA polymerase eta, putative; n=3; Leis... 58 2e-07
UniRef50_A7D0X1 Cluster: DNA-directed DNA polymerase; n=1; Halor... 58 2e-07
UniRef50_A6DEG1 Cluster: DNA-directed DNA polymerase; n=1; Camin... 55 3e-07
UniRef50_A3TNV0 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A0RN38 Cluster: DNA polymerase IV 1, putative; n=1; Cam... 58 3e-07
UniRef50_A6GF38 Cluster: DNA-directed DNA polymerase; n=1; Plesi... 57 4e-07
UniRef50_A5E4H3 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_P63986 Cluster: DNA polymerase IV 1; n=26; Actinomyceta... 57 4e-07
UniRef50_Q126E6 Cluster: DNA-directed DNA polymerase; n=21; Beta... 41 5e-07
UniRef50_O42917 Cluster: N-acetyltransferase eso1; n=1; Schizosa... 56 7e-07
UniRef50_Q14N03 Cluster: Putative dna polymerase iv c-terminal t... 56 9e-07
UniRef50_A7AX68 Cluster: ImpB/MucB/SamB family protein; n=1; Bab... 56 9e-07
UniRef50_A7F1S2 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_Q6CYA8 Cluster: Similar to sgd|S0002827 Saccharomyces c... 52 1e-06
UniRef50_A3GH67 Cluster: DNA repair protein; n=1; Pichia stipiti... 56 1e-06
UniRef50_Q18V51 Cluster: UMUC-like DNA-repair protein; n=2; Desu... 55 2e-06
UniRef50_Q5BVL2 Cluster: SJCHGC04877 protein; n=1; Schistosoma j... 55 2e-06
UniRef50_Q4QCF3 Cluster: DNA polymerase eta, putative; n=3; Leis... 55 2e-06
UniRef50_Q4A688 Cluster: DNA polymerase IV; n=2; Mycoplasma syno... 55 2e-06
UniRef50_Q4PIG2 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_A6SHZ0 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_A0RUK5 Cluster: Nucleotidyltransferase/DNA polymerase i... 54 3e-06
UniRef50_A3VP13 Cluster: DNA polymerase IV; n=1; Parvularcula be... 54 3e-06
UniRef50_A3XQV7 Cluster: DNA polymerase IV; n=12; Bacteroidetes|... 54 5e-06
UniRef50_Q4Q268 Cluster: DNA damage repair protein, putative; n=... 54 5e-06
UniRef50_A6NU31 Cluster: Putative uncharacterized protein; n=1; ... 53 8e-06
UniRef50_A5EBX2 Cluster: DNA polymerase IV; n=2; Bradyrhizobiace... 53 8e-06
UniRef50_A4RZL9 Cluster: Predicted protein; n=1; Ostreococcus lu... 53 8e-06
UniRef50_Q7Q6B2 Cluster: ENSANGP00000004566; n=1; Anopheles gamb... 53 8e-06
UniRef50_A6CAV0 Cluster: DNA-damage-inducible protein P; n=1; Pl... 52 1e-05
UniRef50_Q6CIW8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 52 1e-05
UniRef50_Q6KZW2 Cluster: DNA polymerase IV; n=3; Archaea|Rep: DN... 52 1e-05
UniRef50_Q6KI15 Cluster: DNA-damage repair protein; n=1; Mycopla... 52 2e-05
UniRef50_Q30PG7 Cluster: DNA-directed DNA polymerase; n=1; Thiom... 52 2e-05
UniRef50_A4F5J4 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q9W0P2 Cluster: CG12189-PA; n=3; Sophophora|Rep: CG1218... 52 2e-05
UniRef50_Q2HFL9 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A5D243 Cluster: Nucleotidyltransferase/DNA polymerase; ... 48 3e-05
UniRef50_Q6BS95 Cluster: Similar to CA1452|CaREV1 Candida albica... 51 3e-05
UniRef50_Q5CPV1 Cluster: DinB/family X-type DNA polymerase; n=1;... 50 4e-05
UniRef50_A6QA22 Cluster: DNA polymerase IV; n=1; Sulfurovum sp. ... 50 6e-05
UniRef50_A5BB36 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q759A8 Cluster: ADR369Cp; n=1; Eremothecium gossypii|Re... 50 6e-05
UniRef50_Q9UBZ9 Cluster: DNA repair protein REV1; n=32; Euteleos... 49 1e-04
UniRef50_Q6BM10 Cluster: Similar to YALI0C01573g Yarrowia lipoly... 48 2e-04
UniRef50_UPI0000E4A907 Cluster: PREDICTED: similar to deoxycytid... 45 2e-04
UniRef50_Q4AAV0 Cluster: DNA polymerase IV; n=5; Mycoplasma hyop... 48 2e-04
UniRef50_Q4Q8C3 Cluster: DNA polymerase kappa, putative; n=2; Le... 48 3e-04
UniRef50_Q4DBR5 Cluster: DNA damage repair protein, putative; n=... 48 3e-04
UniRef50_Q97MB3 Cluster: DNA polymerase IV; n=1; Clostridium ace... 48 3e-04
UniRef50_A5DV91 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_UPI0000F1EB8F Cluster: PREDICTED: similar to Rev1S; n=3... 47 5e-04
UniRef50_UPI0000D56635 Cluster: PREDICTED: similar to CG12189-PA... 47 5e-04
UniRef50_A6X194 Cluster: DNA-directed DNA polymerase; n=1; Ochro... 47 5e-04
UniRef50_Q015X2 Cluster: DNA polymerase iota/DNA damage inducibl... 47 5e-04
UniRef50_A3LN71 Cluster: DNA polymerase eta subunit; n=1; Pichia... 47 5e-04
UniRef50_Q0FDK2 Cluster: UMUC-like DNA-repair protein; n=1; alph... 46 7e-04
UniRef50_P54560 Cluster: DNA polymerase IV 2; n=4; Bacillus|Rep:... 46 7e-04
UniRef50_A3ZXX8 Cluster: ImpB/MucB/SamB family protein; n=1; Bla... 45 0.002
UniRef50_A7TRR0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q8TIW3 Cluster: DNA polymerase IV; n=4; Methanosarcinac... 44 0.004
UniRef50_Q4S0P1 Cluster: Chromosome 2 SCAF14781, whole genome sh... 44 0.005
UniRef50_Q4FMY4 Cluster: UmuC; n=5; Bacteria|Rep: UmuC - Pelagib... 44 0.005
UniRef50_A5ZP81 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A5KIM1 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_Q5AHQ7 Cluster: Putative uncharacterized protein RAD30;... 44 0.005
UniRef50_A7HFE4 Cluster: DNA-directed DNA polymerase; n=1; Anaer... 43 0.006
UniRef50_Q4PCE3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_P12689 Cluster: DNA repair protein REV1; n=2; Saccharom... 42 0.015
UniRef50_A7REV5 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.020
UniRef50_O48585 Cluster: T19K24.14 protein; n=1; Arabidopsis tha... 41 0.026
UniRef50_A3VPN3 Cluster: UMUC-like DNA-repair protein; n=4; Alph... 41 0.035
UniRef50_A5DN15 Cluster: Putative uncharacterized protein; n=1; ... 41 0.035
UniRef50_A5IXL3 Cluster: DNA-damage repair protein MucB; n=1; My... 40 0.046
UniRef50_A5DE10 Cluster: Putative uncharacterized protein; n=1; ... 40 0.060
UniRef50_A5Z8E0 Cluster: Putative uncharacterized protein; n=2; ... 40 0.080
UniRef50_Q98R22 Cluster: DNA-DAMAGE REPAIR PROTEIN MUCB; n=1; My... 39 0.11
UniRef50_Q18S53 Cluster: UMUC-like DNA-repair protein; n=4; Clos... 39 0.11
UniRef50_A0LGS2 Cluster: DNA-directed DNA polymerase; n=1; Syntr... 39 0.11
UniRef50_Q2P505 Cluster: Polymerase V subunit; n=4; Xanthomonas|... 38 0.24
UniRef50_Q0F3E1 Cluster: ImpB/MucB/SamB family protein; n=2; Mar... 38 0.24
UniRef50_A1I8E1 Cluster: DNA-directed DNA polymerase; n=1; Candi... 38 0.24
UniRef50_Q5KPS9 Cluster: Putative uncharacterized protein; n=2; ... 38 0.32
UniRef50_Q9SMS4 Cluster: Putative uncharacterized protein AT4g09... 37 0.43
UniRef50_Q6FV13 Cluster: Similar to sp|P12689 Saccharomyces cere... 37 0.43
UniRef50_A7KG33 Cluster: MucB; n=6; Enterobacteriaceae|Rep: MucB... 36 0.74
UniRef50_Q00YX1 Cluster: Translesion DNA polymerase-REV1 deoxycy... 36 0.74
UniRef50_Q31B23 Cluster: DNA-directed DNA polymerase; n=5; Proch... 36 0.98
UniRef50_Q52417 Cluster: RulB; n=22; Pseudomonas|Rep: RulB - Pse... 35 1.7
UniRef50_Q1QXW8 Cluster: DNA-directed DNA polymerase; n=1; Chrom... 35 1.7
UniRef50_UPI00006A0370 Cluster: DNA repair protein REV1 (EC 2.7.... 35 2.3
UniRef50_Q6R286 Cluster: SOS inducible DNA polymerase; n=3; Ente... 35 2.3
UniRef50_A4EK23 Cluster: DNA polymerase IV-AMBIGUITY; n=2; Rhodo... 34 3.0
UniRef50_Q0PGJ8 Cluster: AIBO80; n=1; Bos taurus|Rep: AIBO80 - B... 34 3.0
UniRef50_Q8FRY0 Cluster: Putative uncharacterized protein; n=4; ... 34 4.0
UniRef50_Q11QJ9 Cluster: Nucleotidyltransferase/DNA polymerase i... 34 4.0
UniRef50_UPI0000E474DB Cluster: PREDICTED: similar to scavenger ... 33 6.9
UniRef50_Q4SD87 Cluster: Chromosome 1 SCAF14641, whole genome sh... 33 6.9
UniRef50_Q5ZUT9 Cluster: SOS mutagenesis and repair UmuC protein... 33 6.9
UniRef50_Q5E609 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q1QXT4 Cluster: DNA-directed DNA polymerase; n=1; Chrom... 33 6.9
UniRef50_Q1FL53 Cluster: DNA-directed DNA polymerase; n=3; Clost... 33 6.9
UniRef50_A6G197 Cluster: Alanine racemase; n=1; Plesiocystis pac... 33 6.9
UniRef50_A4F1Q2 Cluster: Anthocyanin 5-O-glucosyltransferase; n=... 33 6.9
UniRef50_UPI00005A38BA Cluster: PREDICTED: similar to Rho GTPase... 33 9.2
UniRef50_Q3A3S4 Cluster: Nucleotidyltransferase/DNA polymerase; ... 33 9.2
UniRef50_A6ET82 Cluster: Nucleotidyltransferase/DNA polymerase i... 33 9.2
UniRef50_A4SWQ9 Cluster: DNA-directed DNA polymerase; n=2; Betap... 33 9.2
UniRef50_Q9NWS1 Cluster: UPF0419 protein C12orf48; n=32; Tetrapo... 33 9.2
>UniRef50_UPI0000D56959 Cluster: PREDICTED: similar to CG7602-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG7602-PA, isoform A - Tribolium castaneum
Length = 537
Score = 221 bits (541), Expect = 1e-56
Identities = 104/176 (59%), Positives = 133/176 (75%)
Frame = +3
Query: 183 EHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
+H ++IIHIDLDCFYAQVEM +NP LR VPLGIQQKNIVVTSNY AR +G+ KCML+ +A
Sbjct: 6 DHSRTIIHIDLDCFYAQVEMNKNPSLRTVPLGIQQKNIVVTSNYTAREFGIKKCMLIPEA 65
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
K+CP+L LVNGEDLH YR S KV +LQ + VE+LG+DEN++DVT+L+ EKL
Sbjct: 66 KKLCPSLVLVNGEDLHDYRQTSYKVTNLLQKYTPLVERLGLDENYLDVTTLINEKLNQK- 124
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
+DL ++G ++ + S +C CGC RL IA+ +A E+R I EL T+CAGIAHNK
Sbjct: 125 -SDLKLVGNVFGDTSDKCECGCTERLIIATTVAQEIRDVIKSELNLTSCAGIAHNK 179
>UniRef50_UPI00015B5F58 Cluster: PREDICTED: similar to CG7602-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG7602-PA - Nasonia vitripennis
Length = 1055
Score = 218 bits (533), Expect = 1e-55
Identities = 102/175 (58%), Positives = 131/175 (74%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H +SI+HID+D FYAQVEM+R+PE + PLG+QQKNIVVT NYEAR +GV KCML+ +AL
Sbjct: 8 HPRSIVHIDVDYFYAQVEMMRHPEFQGKPLGVQQKNIVVTCNYEARAFGVKKCMLIEEAL 67
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP+L LV GEDL YR S K+ +L + VEKLG+DENFIDVTS+V E ++
Sbjct: 68 RLCPSLILVKGEDLTPYRRMSAKILELLHQFTSSVEKLGLDENFIDVTSVVNE--YTTHM 125
Query: 546 NDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
+ + +G+++S P ECPCGCH RL +AS IA +MR KI +ELG T AGIAHNK
Sbjct: 126 DHCMPVGKIFSTPEEECPCGCHTRLAVASSIAMDMRSKILNELGLTCSAGIAHNK 180
>UniRef50_UPI0000DB6FEF Cluster: PREDICTED: similar to DNApol-
CG7602-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to DNApol- CG7602-PA, isoform A -
Apis mellifera
Length = 540
Score = 208 bits (509), Expect = 8e-53
Identities = 99/184 (53%), Positives = 135/184 (73%), Gaps = 9/184 (4%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H ++IIHID+DCFYAQVEM+R+PEL + PLG+QQKN+VVTSNY AR YG+ KCM V +AL
Sbjct: 12 HPRTIIHIDVDCFYAQVEMLRHPELENKPLGVQQKNMVVTSNYIAREYGIKKCMSVQEAL 71
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP L LVNGEDL +YR S K+ +L + VE+LG D+NF+DVTS+V++ + + N
Sbjct: 72 RLCPGLALVNGEDLTNYRHFSTKILEILHQFTPLVERLGFDDNFMDVTSIVQKYMNSGNN 131
Query: 546 NDLIV---------MGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGI 698
++L + +G+++ ECPCGCH RL IAS+IA E+R++IY +L T AGI
Sbjct: 132 SELNINISMEDENPVGEIFGASEEECPCGCHARLIIASKIAAEIRERIYKDLHVTCSAGI 191
Query: 699 AHNK 710
AHNK
Sbjct: 192 AHNK 195
>UniRef50_A7SBP1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 403
Score = 203 bits (496), Expect = 3e-51
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 6/181 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H + I+HID+DCFYAQVEM+RNP LRD P+G+ QK+I+VT NY AR G+ K + + +A
Sbjct: 1 HNRVIVHIDIDCFYAQVEMIRNPCLRDRPVGVSQKHILVTCNYVARAMGLKKLISLAEAK 60
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
K CP+L ++NGEDL YR S +V +L+ + VE+LG+DEN++DV+ LV+E++K+A
Sbjct: 61 KKCPDLVIINGEDLTKYREFSSRVTKLLRRFALRVERLGLDENYVDVSELVQERMKHAPR 120
Query: 546 NDLIVMGQLYSE------PSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
I +G +Y + + CPCGCH RL + S IA+E+RK I+DE+G TTCAGIAHN
Sbjct: 121 GSYIAVGCIYGDNILKGSSNEVCPCGCHERLTVGSVIASELRKAIFDEIGLTTCAGIAHN 180
Query: 708 K 710
K
Sbjct: 181 K 181
>UniRef50_UPI0000E48503 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 642
Score = 200 bits (487), Expect = 4e-50
Identities = 101/187 (54%), Positives = 132/187 (70%), Gaps = 4/187 (2%)
Frame = +3
Query: 162 TCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSK 341
TC + H ++I+HIDLDCFYAQVEM+RNP LRD PLGIQQKNIVVT+NY AR GVSK
Sbjct: 55 TCLQSKLGHSRTIVHIDLDCFYAQVEMLRNPTLRDKPLGIQQKNIVVTTNYVARARGVSK 114
Query: 342 CMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP-VEKLGMDENFIDVTSLV 518
+ +AL CP+L LV+GEDL +YR S KV +L+ + CP VE+LG DENF+DVT LV
Sbjct: 115 LSYIKEALIKCPDLVLVSGEDLTNYRETSTKVTELLEQF-CPLVERLGFDENFMDVTKLV 173
Query: 519 EEKLKNANLNDLIVMGQLY---SEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTC 689
E +L + + L+ +G Y ++ + +C CGC +RL + S IA EMR + +LG T+C
Sbjct: 174 ESRLTSTDSKKLVHIGHSYESDAQIATQCQCGCRDRLTMGSHIAKEMRDTLKSKLGLTSC 233
Query: 690 AGIAHNK 710
AG+A NK
Sbjct: 234 AGVATNK 240
>UniRef50_Q9UNA4 Cluster: DNA polymerase iota; n=28;
Euteleostomi|Rep: DNA polymerase iota - Homo sapiens
(Human)
Length = 715
Score = 186 bits (452), Expect = 6e-46
Identities = 93/174 (53%), Positives = 120/174 (68%), Gaps = 3/174 (1%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I+H+DLDCFYAQVEM+ NPEL+D PLG+QQK +VVT NYEAR GV K M V DA + CP
Sbjct: 30 IVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCP 89
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDL- 554
L LVNGEDL YR S KV +L+ + VE+LG DENF+D+T +VE++L+ ++L
Sbjct: 90 QLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELS 149
Query: 555 --IVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
V G +Y+ S H RL + SQIA EMR+ +Y++LG T CAG+A NK
Sbjct: 150 AVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNK 203
>UniRef50_Q568P0 Cluster: Zgc:110185; n=2; Danio rerio|Rep:
Zgc:110185 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 710
Score = 184 bits (448), Expect = 2e-45
Identities = 97/198 (48%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
Frame = +3
Query: 120 DTNMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIV 299
+ +++ +E+ S+ + + + I+H DLDCFYAQVEM+RNP LR PLGIQQK I+
Sbjct: 13 ERSLESDILETEGSSTDRVSLTSQRVILHFDLDCFYAQVEMIRNPALRTKPLGIQQKYII 72
Query: 300 VTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP-VEK 476
VTSNY AR GV+K M VTDA++ CP L LV GEDL YR S KV +L + CP VE+
Sbjct: 73 VTSNYVARELGVNKLMSVTDAVEKCPQLVLVKGEDLTHYREMSYKVTELLMSY-CPLVER 131
Query: 477 LGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
LG DENF+DVT +VE+++K ++DL G +Y+ S + RL + S IA EMR+
Sbjct: 132 LGFDENFMDVTEMVEKRIKETRISDLSFNGHVYNHESVVVD-EENIRLAVGSVIAAEMRQ 190
Query: 657 KIYDELGYTTCAGIAHNK 710
I+ LG T CAG+A NK
Sbjct: 191 AIFSTLGLTGCAGVASNK 208
>UniRef50_Q0IJ37 Cluster: DNA polymerase iota; n=2; Xenopus
tropicalis|Rep: DNA polymerase iota - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 742
Score = 182 bits (442), Expect = 1e-44
Identities = 92/173 (53%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I+HID+DCFYAQVEM+RNPELR+ PLGIQQK IVVT NYEAR +GV+K ML+ DA + CP
Sbjct: 52 IVHIDMDCFYAQVEMIRNPELRNKPLGIQQKYIVVTCNYEARKFGVTKLMLIKDAREKCP 111
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKL--KNANLND 551
L LV+GEDL YR S + +L+ + VE+LG DEN+IDVT LV++KL + N +
Sbjct: 112 QLVLVSGEDLTPYREMSYRATELLEEFSPQVERLGFDENYIDVTELVDKKLQEERGNGRN 171
Query: 552 LIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
V G +YS+ H R+ S IA+E+R +Y+ LG T CAG A NK
Sbjct: 172 PGVCGHVYSDQKMNVNDWAHVRIAAGSHIASEIRAALYNRLGLTGCAGTASNK 224
>UniRef50_Q9VHV1 Cluster: CG7602-PA, isoform A; n=2; Sophophora|Rep:
CG7602-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 737
Score = 180 bits (439), Expect = 2e-44
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H ++IIH+D+D FYAQVE +R+P LR LGIQQKNIVVT NY AR GV+K ML+ +A
Sbjct: 13 HQRTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNIVVTCNYVARAKGVTKLMLIAEAQ 72
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP+L LVNGEDL YR S ++F +L + VEKLG DENF+DVT+LVE L+ A++
Sbjct: 73 RICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVE--LRQAHV 130
Query: 546 NDLIV---MGQLY---SEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
+ ++ +G Y P + C CGC RL I ++IA E+R+++ LG T CAGIA+N
Sbjct: 131 AEALLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYN 190
Query: 708 K 710
K
Sbjct: 191 K 191
>UniRef50_Q175B7 Cluster: DNA polymerase iota; n=2; Culicidae|Rep:
DNA polymerase iota - Aedes aegypti (Yellowfever
mosquito)
Length = 654
Score = 170 bits (413), Expect = 3e-41
Identities = 90/196 (45%), Positives = 128/196 (65%), Gaps = 13/196 (6%)
Frame = +3
Query: 162 TCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSK 341
T N+++ +H + IIH+D+D FYAQVE + +P L+D P+G++Q+ VVTSNY AR YG+ K
Sbjct: 6 TQNDVE-DHPRVIIHVDMDYFYAQVEEILDPSLKDKPVGVKQRFNVVTSNYIAREYGIKK 64
Query: 342 CMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVE 521
ML+ +A K+CP+L LVNGEDL Y+ S K+ ++ + VEKLG+DEN++DVT +
Sbjct: 65 MMLINEATKLCPDLVLVNGEDLTKYKQMSAKIHEIMHKFTPNVEKLGLDENYLDVTREIN 124
Query: 522 EKL-KNANLNDL-IVMGQLY--SEPS---------AECPCGCHNRLKIASQIANEMRKKI 662
++L + NL L V G +Y E S C CGC RL +AS +A ++R +I
Sbjct: 125 DQLEQKLNLEQLQNVEGFIYPPKEDSNLSDQEVFRRACSCGCDRRLILASHMAKQIRDRI 184
Query: 663 YDELGYTTCAGIAHNK 710
+ ELG CAGIAHNK
Sbjct: 185 FCELGMKCCAGIAHNK 200
>UniRef50_A6QW93 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 744
Score = 122 bits (293), Expect = 1e-26
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I+H D D FYA V V NP L+ VPL +QQK IVVT NYEA G+ K L+ +A KVCP
Sbjct: 16 ILHFDYDSFYASVFEVENPALKAVPLAVQQKQIVVTCNYEACRRGLRKLQLIKEAKKVCP 75
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQ----GWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++ +V GEDL +R AS +++ L+ GW VE+LG DE F+DVTSLV+ ++ N
Sbjct: 76 DVVIVPGEDLTRFRDASKEIYTFLKGYVSGWGGRVERLGFDEVFLDVTSLVDYNIELLNY 135
Query: 546 NDL 554
NDL
Sbjct: 136 NDL 138
>UniRef50_Q4WQ07 Cluster: DNA polymerase iota, putative; n=5;
Trichocomaceae|Rep: DNA polymerase iota, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 596
Score = 120 bits (289), Expect = 4e-26
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
IIH D DCFYA V P L+ +PL +QQK IVVT NYEAR G+ K L+ +A ++CP
Sbjct: 12 IIHFDYDCFYASVFEAEQPVLKSLPLAVQQKQIVVTCNYEARRRGLRKLQLIKEAKQICP 71
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQG--WRCPVEKLGMDENFIDVTSLVEEKLKNANLND 551
++ +V GEDL +R AS +++L LQ W VEKLG DE F+DV+ +V ++ N ND
Sbjct: 72 DVVIVLGEDLTRFRNASKELYLFLQDFVWGKRVEKLGFDEVFLDVSDMVTYNVEMLNRND 131
Query: 552 L 554
L
Sbjct: 132 L 132
>UniRef50_Q86ZI6 Cluster: Related to DNA Polymerase iota; n=2;
Neurospora crassa|Rep: Related to DNA Polymerase iota -
Neurospora crassa
Length = 753
Score = 113 bits (272), Expect = 4e-24
Identities = 52/117 (44%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Frame = +3
Query: 210 DLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKL 389
DLDCFYAQV + P L+ +PLGI+QK+++ T NY AR GV K M + AL +CP+L +
Sbjct: 49 DLDCFYAQVYENKTPSLKSLPLGIRQKSLLATCNYPARRLGVKKLMSIASALAICPDLVI 108
Query: 390 VNGEDLHSYRTASGKVFLVLQ--GWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDL 554
V+GEDL +R S +++ +L+ W VE+LG+DE ++DV+ ++E ++ N +DL
Sbjct: 109 VDGEDLTPFRDVSKRLYALLRSYSWNDRVERLGLDEVWMDVSDIIEYNVELLNRHDL 165
>UniRef50_UPI000023CC7C Cluster: hypothetical protein FG06286.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06286.1 - Gibberella zeae PH-1
Length = 616
Score = 109 bits (262), Expect = 7e-23
Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 25/199 (12%)
Frame = +3
Query: 189 FKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
F + D DCFYAQV + PEL++ P+G++QKN + T NY AR G++K M V++A +
Sbjct: 64 FTDLSKKDYDCFYAQVFENKKPELKNFPVGVKQKNCLATCNYNARARGLTKLMSVSEAKR 123
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQ--GWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
CP L LV+GEDL +R S +F + W E+LG DE F+DVT ++E L N
Sbjct: 124 KCPELVLVDGEDLTPFRDMSKTLFNFFKSFSWNNKAERLGFDEVFMDVTDIIEYNLACLN 183
Query: 543 L----NDLIVMGQLYSEPSAECP----CGC---------------HNRLKIASQIANEMR 653
L N + + E +C GC + RL + S +A +R
Sbjct: 184 LEFLENSFFFLSKNDPERGFQCDLTSVAGCVEGTASPTPDTKEPAYLRLVLGSHLAQFLR 243
Query: 654 KKIYDELGYTTCAGIAHNK 710
++ ++ G+T+ GI+ NK
Sbjct: 244 LQVEEKHGFTSTCGISINK 262
>UniRef50_A2QJ22 Cluster: Contig An04c0170, complete genome; n=1;
Aspergillus niger|Rep: Contig An04c0170, complete genome
- Aspergillus niger
Length = 615
Score = 109 bits (262), Expect = 7e-23
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
++ D DCFYA V V P L+ +PL +QQK IVVT NYEAR G+ K L+ +A ++CP
Sbjct: 58 LLRTDYDCFYASVFEVEQPVLKSLPLAVQQKQIVVTCNYEARRRGLRKLQLIKEAKQICP 117
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQG--WRCPVEKLGMDENFIDVTSLVEEKLKNANLND 551
++ +V GEDL +R AS +F ++ W VE+LG DE I + + +
Sbjct: 118 DVVIVLGEDLSRFRDASKDLFHYIRSFVWGEKVERLGFDEVCIASIDSATDLGSLSEMPV 177
Query: 552 LIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
+V+ + + RL +AS +A +R ++ + GYT GI+ +K
Sbjct: 178 EMVLHGFLGCTDEDTSAWLYTRLLVASHLAGYLRGQLEQQKGYTATVGISTSK 230
>UniRef50_Q4PF20 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 763
Score = 108 bits (259), Expect = 2e-22
Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
II +DLD FY R+P L +P+GIQQK +V T +YEAR GV K + DALK CP
Sbjct: 61 IIALDLDAFYVSACRKRDPSLVGIPIGIQQKALVATISYEARAAGVGKLDSIKDALKKCP 120
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQG--WRCPVEKLGMDENFIDVTSLVEEKL 530
++ LVNGEDL +R S +V+ +++ W VEKLGMDE F DVT +V+ L
Sbjct: 121 DMILVNGEDLTYFRQVSSQVWRLVRSIVWEKRVEKLGMDELFCDVTEMVDHHL 173
Score = 33.5 bits (73), Expect = 5.2
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3
Query: 615 RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
R+ +A+++A MR++I DE+G T AGIA +K
Sbjct: 235 RMLVAARLAYYMRQRISDEVGLTCSAGIAPSK 266
>UniRef50_Q2GVP2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 436
Score = 103 bits (246), Expect = 6e-21
Identities = 70/179 (39%), Positives = 95/179 (53%), Gaps = 24/179 (13%)
Frame = +3
Query: 246 RNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTA 425
R P LR +PLGI+QK I+ T NY AR GV K M + A K+CP+L L +GEDL +R
Sbjct: 21 RQPSLRALPLGIKQKGILATCNYVARRRGVKKLMPIAQARKICPDLVLADGEDLSPFRDV 80
Query: 426 SGKVFLVLQ--GWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDLIVM--------GQLY 575
S ++ +L+ W VE+LG+DE F+DVT +V ++ N N L ++
Sbjct: 81 SKRLHALLRSYSWNGKVERLGLDEVFLDVTDIVSYNVELLNKNSLRQSYFCLSRSDPEVG 140
Query: 576 SEPSAECPCGC----------HN----RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
E A C GC N RL +AS +A +R KI E GYT+ GI+ NK
Sbjct: 141 FEYDATCFAGCVFGGDGVPSYENALCVRLLVASHLARYLRLKIEAE-GYTSACGISTNK 198
>UniRef50_Q8XZ19 Cluster: DNA polymerase IV; n=46; Bacteria|Rep: DNA
polymerase IV - Ralstonia solanacearum (Pseudomonas
solanacearum)
Length = 357
Score = 87.4 bits (207), Expect(2) = 2e-19
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIH D DCFYA +EM +P L PL + +++ +V T NYEAR +G+ M +
Sbjct: 2 RKIIHCDCDCFYAAIEMRDDPRLVGRPLAVGGRPERRGVVATCNYEARKFGIHSAMPMAQ 61
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A+K CP+L L+ + YR + ++F + QG+ VE L +DE ++DVT
Sbjct: 62 AVKRCPDL-LIVPPAMDKYRQVARQIFAIYQGYTPLVEPLSLDEAYLDVT 110
Score = 31.1 bits (67), Expect(2) = 2e-19
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +3
Query: 630 SQIANEMRKKIYDELGYTTCAGIAHNK 710
++IA ++R+++ +E+G T AG+A NK
Sbjct: 120 TRIAEDIRRRVREEIGITVSAGVAPNK 146
>UniRef50_Q2AFE9 Cluster: UMUC-like DNA-repair protein; n=1;
Halothermothrix orenii H 168|Rep: UMUC-like DNA-repair
protein - Halothermothrix orenii H 168
Length = 385
Score = 85.0 bits (201), Expect(2) = 4e-19
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKN--IVVTSNYEARNYGVSKCMLVTDA 362
I+H+D+D F+A VE + NPE R P+ GI +N +V T++YEAR YGV M V +A
Sbjct: 5 IMHVDMDAFFASVEQLDNPEFRRKPVIVGGIDLENRGVVSTASYEARKYGVKSAMSVVEA 64
Query: 363 LKVCPNLKLVNGEDLHS-YRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
++CP V G HS YR S K+F + + VEK+ +DE F+D+T
Sbjct: 65 RRLCPEGIFVKGR--HSRYREISEKIFRIFNTYTPLVEKVSIDEAFLDLT 112
Score = 32.7 bits (71), Expect(2) = 4e-19
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 603 GCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
GCH + +I +++ KI ++LG T G+++NK
Sbjct: 113 GCHRLFGSSVEIGKKIKNKIKEQLGLTASIGLSYNK 148
>UniRef50_Q4L7K8 Cluster: DNA polymerase IV; n=16;
Staphylococcus|Rep: DNA polymerase IV - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 358
Score = 85.4 bits (202), Expect(2) = 6e-19
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQK----NIVVTSNYEARNYGVSKCMLVTD 359
+ IIHID+D F+AQVEM NP L+ P+ + K +V T++YEAR YGV M ++
Sbjct: 4 RRIIHIDMDYFFAQVEMRDNPTLKGKPVIVGGKASTRGVVSTASYEARKYGVHSAMPMSQ 63
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A K+CPN V +YR AS + + + + VE + +DE ++D+T LV L +
Sbjct: 64 AHKLCPNGYYVRAR-FDAYREASAVIMSIFKSYTDIVEPMSLDEAYLDITHLVRPDLSAS 122
Query: 540 NLNDLI 557
+ I
Sbjct: 123 KIATFI 128
Score = 31.5 bits (68), Expect(2) = 6e-19
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +3
Query: 627 ASQIANEMRKKIYDELGYTTCAGIAHNK 710
AS+IA +R+ I+++ G T+ AG+++NK
Sbjct: 121 ASKIATFIRRDIFEQTGLTSSAGVSYNK 148
>UniRef50_A7AL65 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 364
Score = 87.4 bits (207), Expect(2) = 4e-18
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDA 362
+ IIHID+D FYA VE NPELR +PL + +++ +V ++YEAR +GV M A
Sbjct: 3 RKIIHIDMDAFYASVEQRDNPELRGIPLAVGHAEERGVVAAASYEARKFGVRSAMSSQRA 62
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
++CP L V+G + Y+ S ++ + + VE L +DE F+DVT
Sbjct: 63 KRLCPQLTFVSGR-MDVYKAVSRQIHEIFHEYTDIVEPLSLDEAFLDVT 110
Score = 26.6 bits (56), Expect(2) = 4e-18
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
+ +A IA +++KI +EL AG+++NK
Sbjct: 116 IPLAVDIAKAIKQKIREELHLIASAGVSYNK 146
>UniRef50_Q8EQ56 Cluster: DNA polymerase IV; n=61; Bacillaceae|Rep:
DNA polymerase IV - Oceanobacillus iheyensis
Length = 419
Score = 93.1 bits (221), Expect = 6e-18
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 5/160 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVTDA 362
I HID++CFYA VEM NP L+ PL I ++K I+VTS+YEAR GV M + A
Sbjct: 12 IFHIDMNCFYASVEMAHNPSLKGKPLAIAGNPEERKGIIVTSSYEARGKGVKTTMPIWQA 71
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
K+CP+L L+ + YR AS ++F +L V+ + +DE ++D+T + K
Sbjct: 72 KKLCPDLILMR-PNFDRYRAASREIFKMLAEITPYVQPVSIDEGYMDITDTIYAKDPLVT 130
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKI 662
N L ++ S C G K +++A++M+K +
Sbjct: 131 ANQL--QQRILSGLDIPCSIGIAPN-KFLAKMASDMKKPL 167
>UniRef50_Q8DBI7 Cluster: DNA polymerase IV; n=68;
Gammaproteobacteria|Rep: DNA polymerase IV - Vibrio
vulnificus
Length = 354
Score = 92.3 bits (219), Expect = 1e-17
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIHID+DCFYA VEM NP R PL + +Q+ ++ T NYEAR +GV M
Sbjct: 6 RKIIHIDMDCFYAAVEMRDNPNFRSRPLAVGGHEKQRGVISTCNYEARKFGVRSAMPTAQ 65
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
ALK+CP+L +V G + Y+ S + + + +E L +DE ++DVT + +A
Sbjct: 66 ALKLCPSLLVVPGR-MQVYKEVSTHIRSIFSRYTHLIEPLSLDEAYLDVTDSTQCH-GSA 123
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
L + +++E G +K +++A++M K
Sbjct: 124 TLIAEAIRRDIWNELQLTASAGV-APIKFLAKVASDMNK 161
>UniRef50_Q38C71 Cluster: DNA polymerase eta, putative; n=3;
Trypanosoma|Rep: DNA polymerase eta, putative -
Trypanosoma brucei
Length = 525
Score = 72.9 bits (171), Expect(2) = 2e-17
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVR-NPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
+ I HID+DCFYAQVE VR + R P + Q ++ NY AR +G+ + VTDAL+
Sbjct: 2 RCIAHIDMDCFYAQVEAVRLGVDCRTEPYVLSQWGNLIAVNYPARKFGIGRFDTVTDALE 61
Query: 369 VCPNLKLVN------GE----------------DLHSYRTASGKVFLVLQGW-RCPVEKL 479
CP++K+ + GE L YR AS K+F +L + VEK
Sbjct: 62 KCPHVKISHVATYAAGEVEYRYHENPSKQTHKVALEPYREASRKIFRILDSFDGVEVEKG 121
Query: 480 GMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAE 593
+DE F+DVT +K + L G+L E A+
Sbjct: 122 SVDEAFLDVTKAAH--MKQGEMGLLSSQGELRLEDVAD 157
Score = 39.1 bits (87), Expect(2) = 2e-17
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 570 LYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
L+ +P+AE + L AS++ +R+KIYDEL Y AGIAHNK
Sbjct: 189 LHPQPTAENM----SLLAAASRVVWTIRQKIYDELRYDCSAGIAHNK 231
>UniRef50_Q9KPS5 Cluster: DNA polymerase IV; n=56; cellular
organisms|Rep: DNA polymerase IV - Vibrio cholerae
Length = 360
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Frame = +3
Query: 183 EHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCML 350
+ + IIH+D+DCF+A VEM NP R++ L + +Q+ ++ T NY+AR +GV M
Sbjct: 3 DRIRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMP 62
Query: 351 VTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKL 530
ALK+CP L +V G + Y++ S ++ + Q + +E L +DE ++DV+ +
Sbjct: 63 TAQALKLCPQLHVVPGR-MSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQ- 120
Query: 531 KNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+A L + ++ E + G +K +++A+++ K
Sbjct: 121 GSATLIAQAIRRDIWQELNLTASAGV-APIKFLAKVASDLNK 161
>UniRef50_Q1N612 Cluster: DNA polymerase IV; n=1; Oceanobacter sp.
RED65|Rep: DNA polymerase IV - Oceanobacter sp. RED65
Length = 366
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/110 (37%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ ++H+D DCF+A VEM +P+ RD+PL I ++ ++ T NY AR YGV M
Sbjct: 3 RQVLHVDCDCFFAAVEMRDSPQYRDIPLAIGGSSDRRGVISTCNYVARAYGVRSAMPSGQ 62
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
ALK+CP+L L+ G D+ YR S +V +++ + E++ +DE +I+++
Sbjct: 63 ALKLCPDLMLIRG-DMEKYRRVSREVMSIVESYGLAFEQVSIDEAYIEIS 111
>UniRef50_A4RD58 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 89.4 bits (212), Expect = 8e-17
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 RNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTA 425
+ P L+ +P+GI+QK+I+ T NY AR GV K M +++A +CP+L LV+GEDL +R
Sbjct: 65 KEPSLKSLPVGIKQKSILATCNYVARRRGVKKLMRISEARDICPDLVLVDGEDLTPFRDT 124
Query: 426 SGKVFLVLQ--GWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDL 554
S ++ VL+ W E+LG+DE F+DV+ +V L N + L
Sbjct: 125 SKILYRVLRSFSWNDRAERLGLDEVFLDVSDMVSYNLDLLNPHGL 169
>UniRef50_A6NWJ9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 424
Score = 81.8 bits (193), Expect(2) = 9e-17
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVT 356
+ I+H D++CFYA VEM R+PELRD PL + ++ IV+T+NY A+ YGV M +
Sbjct: 12 RHILHCDMNCFYASVEMQRHPELRDTPLAVCGSQEERHGIVLTANYIAKPYGVKTGMAIW 71
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
A + CP L + D+ Y S + + + VE G+DE+++DVT V
Sbjct: 72 QAKQRCPQL-VTLPPDMDEYIRISRYAREIYEDYTDQVEPFGLDESWLDVTGSV 124
Score = 27.9 bits (59), Expect(2) = 9e-17
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 636 IANEMRKKIYDELGYTTCAGIAHNK 710
IA E+ +I ELG T G+A+NK
Sbjct: 133 IAREISSRIKSELGITASIGVANNK 157
>UniRef50_UPI0000D5778B Cluster: PREDICTED: similar to CG7143-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG7143-PA - Tribolium castaneum
Length = 679
Score = 88.2 bits (209), Expect = 2e-16
Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 23/194 (11%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
++ +D+DCFY QVE NP L P+ + Q N ++ NY AR+ GV++ M +A
Sbjct: 8 VVLVDMDCFYCQVEEKLNPALEGKPIAVVQYNAWQGGGIIAVNYPARDEGVTRHMRGFEA 67
Query: 363 LKVCPNLKLVN-----GE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
K CP++ LV G+ DL YR A +V VL + +++ +DE ++D+T +VE+
Sbjct: 68 KKKCPSINLVQVPELRGKADLTKYRDAGKRVADVLLTFTPLLQRASVDEAYLDITEIVEK 127
Query: 525 KLKNA-------NLNDLIVMGQ-----LYSEPSAECPCGCHNRLKIASQIANEMRKKIYD 668
+++ NL++ V+G L++ + + + +L + + E+R++++
Sbjct: 128 RIEKGLDDLTLINLSNTFVVGCELEDFLHNAITNKEYSIPNLKLAVGGLVTEEIRREVFK 187
Query: 669 ELGYTTCAGIAHNK 710
GY AGIAHNK
Sbjct: 188 VTGYKCSAGIAHNK 201
>UniRef50_A7F9S4 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 594
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Frame = +3
Query: 252 PELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASG 431
P+ +QQK I+VT NYEAR G+SK L+++A K+CP++ +V GE+L +R AS
Sbjct: 17 PDAMKKKKAVQQKQIIVTCNYEARLRGLSKLQLISEAKKICPDVVIVLGEELGRFRDASK 76
Query: 432 KVFLVLQ--GWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDL 554
++ L+ W VE+LG DE F+DVT +V+ K N NDL
Sbjct: 77 MLYKHLEKFSWSGKVERLGFDEVFMDVTDIVDYNQKLLNPNDL 119
>UniRef50_Q4D5I0 Cluster: DNA polymerase kappa, putative; n=4;
Trypanosoma cruzi|Rep: DNA polymerase kappa, putative -
Trypanosoma cruzi
Length = 604
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/115 (37%), Positives = 70/115 (60%)
Frame = +3
Query: 180 GEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTD 359
G HF++ +H+D+D FYA VEM +NP L DVPLG+ +++ T+NY AR YGV M
Sbjct: 153 GRHFRNYVHVDMDMFYAAVEMKKNPSLVDVPLGVGTFDMLSTTNYVARRYGVRSGMPGYI 212
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
+K+CP+L +V DL +Y + V + + +G+DE ++VT+ +++
Sbjct: 213 GVKLCPSLVIV-PTDLDAYHAEAAVVRGIAAAYDPNFTSVGLDELTMEVTAYLQQ 266
>UniRef50_Q6MQV5 Cluster: DNA polymerase IV; n=4;
Proteobacteria|Rep: DNA polymerase IV - Bdellovibrio
bacteriovorus
Length = 356
Score = 86.6 bits (205), Expect = 5e-16
Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIHID+DCFYA VE+ PEL+ PLGI ++++ T++YEAR +GV M +
Sbjct: 2 RKIIHIDMDCFYAAVEVKYRPELKGKPLGIGGPPNTRSVLCTASYEARKFGVRSAMPSSQ 61
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A+++CP L L+ Y+ S KV +++ + +E L +DE ++DVT E+ +A
Sbjct: 62 AVRLCPQLVLI-PPHFDLYKAESRKVREIMERFTNKIEPLSLDEAYLDVTD-CEQFGGSA 119
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
L + +++E + G K ++IA++ +K
Sbjct: 120 TLIAQEIRRLIFTELNLTASAGVAPN-KFLAKIASDWKK 157
>UniRef50_Q1E7F8 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 623
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 285 QKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKV--FLVLQGW 458
QK IVVT NYEAR G+ K L+ DA + CP++ +V GEDL +R AS ++ FL W
Sbjct: 23 QKQIVVTCNYEARRRGLRKLQLIKDAKRTCPDVVIVLGEDLTKFRDASKELHSFLKKYIW 82
Query: 459 RCPVEKLGMDENFIDVTSLVEEKLKNANLNDL 554
VEKLG DE F+DVTS+++ + N NDL
Sbjct: 83 GDRVEKLGFDEVFLDVTSMIDHNAQFLNRNDL 114
>UniRef50_Q0UKS6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 206
Score = 85.8 bits (203), Expect = 9e-16
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 25/144 (17%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEAR----------------- 323
++IH D D FYA V P L+ +PL IQQK IVVT NYEAR
Sbjct: 16 TVIHFDYDAFYASVVENEFPHLKSLPLAIQQKQIVVTCNYEARRRVSSSLFRFINVCSQP 75
Query: 324 ---NYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQG--WRCPVEKLGMD 488
+ G+ K L+++A ++CP++ +V GEDL +R AS +++ +++ W E+LG D
Sbjct: 76 CGKDTGLYKLQLISEAKRLCPDVVIVLGEDLTRFRNASKELYALVRSFSWNARCERLGFD 135
Query: 489 ENFIDVTSLVEEK---LKNANLND 551
E F+DV+ +++ L ++NL++
Sbjct: 136 EVFMDVSDIIDYNTGVLNSSNLSN 159
>UniRef50_Q5JLR9 Cluster: Putative DNA polymerase; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative DNA polymerase -
Oryza sativa subsp. japonica (Rice)
Length = 642
Score = 85.4 bits (202), Expect = 1e-15
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 31/202 (15%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
I H+D+DCFY QVE RNPELR P + Q N ++ +YEAR +GV + M +A
Sbjct: 14 IAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDEA 73
Query: 363 LKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
VCP++ LV + DL+ YR+A +V +L + E+ +DE ++D+T +E
Sbjct: 74 KMVCPSINLVQVPVARDKADLNVYRSAGSEVVTIL-STKGKCERASIDEVYLDLTDAAKE 132
Query: 525 KLKNA--NLNDLI--------VMGQLYSEPSAE-------CPCGCHNRLKIAS---QIAN 644
L + L +LI ++G + E C + K+ S I
Sbjct: 133 MLLESPPELLELIFEEATKSNILGLPSDVSNREDSVRAWLCRADADYQDKLLSCGAIIVA 192
Query: 645 EMRKKIYDELGYTTCAGIAHNK 710
++R K+ +E +T AGIAHNK
Sbjct: 193 QLRVKVLEETQFTCSAGIAHNK 214
>UniRef50_Q62IX2 Cluster: DNA polymerase IV; n=32; Bacteria|Rep: DNA
polymerase IV - Burkholderia mallei (Pseudomonas mallei)
Length = 400
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Frame = +3
Query: 177 DGEHF-KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSK 341
D H + IIH D DCFYA VEM +P LR PL + Q+ ++ T NY+AR YGV
Sbjct: 13 DAAHLARKIIHCDCDCFYASVEMRDDPSLRGRPLAVGGRPDQRGVIATCNYDARRYGVHS 72
Query: 342 CMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
M A++ CP+L L+ + YR AS + + + + VE L +DE ++DV+
Sbjct: 73 AMSSALAMRKCPDL-LILPPAMDKYRAASRLIMAIYRDYTPDVEPLSLDEAYLDVS 127
>UniRef50_Q98NW7 Cluster: DNA polymerase IV 3; n=25; Bacteria|Rep:
DNA polymerase IV 3 - Rhizobium loti (Mesorhizobium
loti)
Length = 361
Score = 73.3 bits (172), Expect(2) = 6e-15
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
+ IIH+D+D FYA VE NPELR PL G + +V ++YEAR +GV M A
Sbjct: 10 RKIIHVDMDAFYASVEQRDNPELRGKPLAVGGAAARGVVAAASYEARAFGVRSAMPSVTA 69
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ CP L V YR S ++ V +E L +DE ++DVT
Sbjct: 70 KRKCPELIFVPPR-FDVYRAVSAQIRDVFAEHTDLIEPLSLDEAYLDVT 117
Score = 30.3 bits (65), Expect(2) = 6e-15
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 612 NRLKIASQ--IANEMRKKIYDELGYTTCAGIAHNK 710
NRL I+S IA +R KI + G T AGI++NK
Sbjct: 119 NRLNISSATTIAEMIRAKILEVTGLTASAGISYNK 153
>UniRef50_Q8UJK7 Cluster: DNA polymerase IV 2; n=27;
Proteobacteria|Rep: DNA polymerase IV 2 - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 357
Score = 72.5 bits (170), Expect(2) = 6e-15
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDA 362
+ IIH+D+D FYA VE NPELR P+ + + +V ++YEAR +GV M A
Sbjct: 2 RKIIHVDMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTA 61
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ CP+L V Y+ S ++ + + +E L +DE ++DVT
Sbjct: 62 ARRCPDLIFVPPR-FDVYKAVSQQIRAIFAEYTRLIEPLSLDEAYLDVT 109
Score = 31.1 bits (67), Expect(2) = 6e-15
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
++IA++IA+E+R++I G AGI++NK
Sbjct: 115 MEIATEIASEIRERIKQITGLNASAGISYNK 145
>UniRef50_Q0V979 Cluster: Zgc:136881; n=4; Danio rerio|Rep:
Zgc:136881 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 294
Score = 83.0 bits (196), Expect = 7e-15
Identities = 46/127 (36%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDALKV 371
+D+DCFY QVE PEL++ P + Q ++ +YEAR +GV + M DA K+
Sbjct: 12 VDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADDARKL 71
Query: 372 CPNLKL-----VNGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
CP+L++ +G+ DL YR AS +V V+ + +E+ +DE ++D+T+ V+E+LK
Sbjct: 72 CPDLQVARVPEAHGKADLTHYREASVEVIEVMSRF-AVIERASIDEAYMDLTASVQERLK 130
Query: 534 NANLNDL 554
N ++ D+
Sbjct: 131 NTSVQDI 137
>UniRef50_Q9I534 Cluster: DNA polymerase IV; n=8;
Gammaproteobacteria|Rep: DNA polymerase IV - Pseudomonas
aeruginosa
Length = 349
Score = 82.6 bits (195), Expect = 9e-15
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIHID DCFYA +EM +P LR L + ++ +V T +YEAR YGV M +
Sbjct: 2 RKIIHIDCDCFYAALEMRDDPSLRGKALAVGGSPDKRGVVATCSYEARAYGVRSAMAMRT 61
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTS 512
ALK+CP+L +V YR S ++ + + + +E L +DE ++DV++
Sbjct: 62 ALKLCPDLLVVRPR-FDVYRAVSKQIHAIFRDYTDLIEPLSLDEAYLDVSA 111
>UniRef50_UPI000065E61F Cluster: DNA polymerase eta (EC 2.7.7.7)
(RAD30 homolog A) (Xeroderma pigmentosum variant type
protein).; n=1; Takifugu rubripes|Rep: DNA polymerase
eta (EC 2.7.7.7) (RAD30 homolog A) (Xeroderma
pigmentosum variant type protein). - Takifugu rubripes
Length = 775
Score = 81.8 bits (193), Expect = 2e-14
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDALKV 371
+D+DCFY QVE NP L++ P + Q ++ +YEAR +GV++ M V DA K+
Sbjct: 12 VDMDCFYVQVEQRLNPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVDDAKKL 71
Query: 372 CPNLKLV-----NGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
CP+L++ +G+ DL YR AS +V V+ + +E+ +DE ++D+T+ V+++LK
Sbjct: 72 CPDLQVARVRESHGKADLTFYREASVEVIEVMSRF-AVIERASIDEAYMDLTAAVQQRLK 130
Query: 534 NAN 542
N N
Sbjct: 131 NLN 133
>UniRef50_Q9UBT6-3 Cluster: Isoform 3 of Q9UBT6 ; n=4;
Catarrhini|Rep: Isoform 3 of Q9UBT6 - Homo sapiens
(Human)
Length = 672
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/111 (36%), Positives = 66/111 (59%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+I+HID+D FYA VEM NPEL+D P+ + +++ TSNY AR +GV M A ++C
Sbjct: 102 TIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLC 161
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
P L +V + YR S +V +L + + +DE ++++T +EE+
Sbjct: 162 PQLIIV-PPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 211
>UniRef50_Q4P422 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 682
Score = 81.8 bits (193), Expect = 2e-14
Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEA-RNYGVSKCMLVTDALK 368
++I+H D+D FYA VE+ R+P L+ G+ ++VT++YEA R YGV M V A
Sbjct: 146 RTILHTDIDMFYAAVELARDPSLKGKCFGV-GSGVLVTASYEARRGYGVRSGMAVFVAKA 204
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLN 548
+CP+L +V D+ SY AS KV + + + + K +DE ++D+T VE+ NA+
Sbjct: 205 LCPHLIVVK-NDMQSYVQASQKVMAIFEQYDENLAKASLDEAYLDITEYVEQ---NASSI 260
Query: 549 DLIVMGQLYSEPSAECPCGCHNRLKIASQIA-NEMRKKI 662
D +V QL ++ + H +L ++ IA N M KI
Sbjct: 261 DQVVQ-QLRNQVRS------HTQLTVSVGIAPNTMLAKI 292
>UniRef50_Q9UBT6 Cluster: DNA polymerase kappa; n=39; Tetrapoda|Rep:
DNA polymerase kappa - Homo sapiens (Human)
Length = 870
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/111 (36%), Positives = 66/111 (59%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+I+HID+D FYA VEM NPEL+D P+ + +++ TSNY AR +GV M A ++C
Sbjct: 102 TIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLC 161
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
P L +V + YR S +V +L + + +DE ++++T +EE+
Sbjct: 162 PQLIIV-PPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 211
>UniRef50_A2WV83 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 498
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
I H+D+DCFY QVE RNPELR P + Q N ++ +YEAR +GV + M +A
Sbjct: 14 IAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDEA 73
Query: 363 LKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
VCP++ LV + DL+ YR+A +V +L + E+ +DE ++D+T +E
Sbjct: 74 KMVCPSINLVQVPVARDKADLNVYRSAGSEVVAIL-STKGKCERASIDEVYLDLTDAAKE 132
Query: 525 KL 530
L
Sbjct: 133 ML 134
>UniRef50_Q8REB0 Cluster: DNA polymerase IV; n=3; Fusobacterium
nucleatum|Rep: DNA polymerase IV - Fusobacterium
nucleatum subsp. nucleatum
Length = 350
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/114 (37%), Positives = 69/114 (60%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I+H D+D FYA +E+ RNP+L++ PL + +NIV T++YEAR Y + M V+DA +CP
Sbjct: 5 IMHYDMDAFYASIEINRNPKLKNKPL-VVGENIVTTASYEARKYDIHSAMKVSDAKLLCP 63
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
L +V D Y S ++ ++ VE + DE +ID+T +++ + K A
Sbjct: 64 KL-IVLPVDKTEYIRISNEIHNLILKITNKVEFVATDEGYIDLTDVIKPENKKA 116
>UniRef50_A6DIV6 Cluster: DNA polymerase IV; n=1; Lentisphaera
araneosa HTCC2155|Rep: DNA polymerase IV - Lentisphaera
araneosa HTCC2155
Length = 354
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/110 (34%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIH+D+DCF+A VE+ PEL+ + + +++ ++ +NYEARN+GV +
Sbjct: 6 RKIIHVDMDCFFAAVEVRDQPELKGKAVAVGGAAKRRGVIAAANYEARNFGVHSALSTAI 65
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
AL+ CP L +V ++ Y+ S +VF + + + VE + +DE F+DV+
Sbjct: 66 ALRRCPELIIVR-PNMSKYKEVSTEVFKIFRKYTHLVEAISLDEAFLDVS 114
>UniRef50_A4ZYA8 Cluster: Translesion synthesis DNA polymerase eta
splice variant; n=9; Magnoliophyta|Rep: Translesion
synthesis DNA polymerase eta splice variant -
Arabidopsis thaliana (Mouse-ear cress)
Length = 442
Score = 81.0 bits (191), Expect = 3e-14
Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 33/204 (16%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
I H+D+DCFY QVE + PELR +P + Q N ++ +YEAR GV + M +A
Sbjct: 14 IAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGDEA 73
Query: 363 LKVCPNLKLV-----NGE-DLHSYRTASGKVFLVL-QGWRCPVEKLGMDENFIDVTSLVE 521
CP ++LV G+ DL+ YR+A +V +L + +C E+ +DE ++D+T E
Sbjct: 74 KAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKC--ERASIDEVYLDLTDAAE 131
Query: 522 EKLKNANLNDLIVM----------------GQLYSEPSAECPC--GCHNRLKIAS---QI 638
L +A L ++ G + E C R K+ S I
Sbjct: 132 SMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKLLSCGIII 191
Query: 639 ANEMRKKIYDELGYTTCAGIAHNK 710
E+RK++ E +T AGIAHNK
Sbjct: 192 VAELRKQVLKETEFTCSAGIAHNK 215
>UniRef50_Q5Q9H7 Cluster: Polymerase kappa isoform 2; n=14;
Murinae|Rep: Polymerase kappa isoform 2 - Mus musculus
(Mouse)
Length = 793
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/111 (35%), Positives = 66/111 (59%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+I+H+D+D FYA VEM NPEL+D P+ + +++ TSNY AR +GV M A ++C
Sbjct: 101 TIVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSMLATSNYHARRFGVRAAMPGFIAKRLC 160
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
P L +V + YR S +V +L + + +DE ++++T ++E+
Sbjct: 161 PQLIIV-PPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQER 210
>UniRef50_Q83EN5 Cluster: DNA-damage-inducible protein P; n=4;
Bacteria|Rep: DNA-damage-inducible protein P - Coxiella
burnetii
Length = 357
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Frame = +3
Query: 171 EIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVS 338
E + + IIH+D+DCFY +EM NP+LR+ P+ + + ++ T+NY AR YGV
Sbjct: 3 ESTSKKLRKIIHVDMDCFYVAIEMRDNPKLREKPVAVGGAAHSRGVICTANYIARGYGVQ 62
Query: 339 KCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ + A K+CP+L ++ ++ YR ++ + Q + VE L +DE ++DV+
Sbjct: 63 SAISSSYAKKLCPSL-IILPVNMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVS 118
>UniRef50_A4VCZ3 Cluster: DNA polymerase IV / kappa; n=1;
Tetrahymena thermophila SB210|Rep: DNA polymerase IV /
kappa - Tetrahymena thermophila SB210
Length = 950
Score = 80.6 bits (190), Expect = 3e-14
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPN 380
+H D+D FY E+ P+L+D+P+ + +++ T+NY AR +GV M A K+CP
Sbjct: 107 VHFDMDMFYVACELKDRPQLKDLPVAVGGMSMISTANYVARKFGVRSAMPGFIAKKLCPQ 166
Query: 381 LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKN--ANLNDL 554
L L+ + YR AS + VL + +E +G+DE +D+T +++ N A + DL
Sbjct: 167 LILIPC-NFEKYRKASDQFKKVLYQYDPNLESMGLDEANLDITDYLQQNNINSDAQIYDL 225
Query: 555 I--VMGQLY-SEPSAECPCGCHNRLKIASQIANEMRK 656
+ Q++ S C CG K+ ++I ++M K
Sbjct: 226 CHSIRNQVFESTGGLTCSCGIGPN-KMLAKICSDMNK 261
>UniRef50_A6QNV6 Cluster: MGC152198 protein; n=3; Eutheria|Rep:
MGC152198 protein - Bos taurus (Bovine)
Length = 877
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/111 (36%), Positives = 66/111 (59%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+I+HID+D FYA VEM NPEL+D P+ + +++ TSNY AR +GV M A ++C
Sbjct: 109 TIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLC 168
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
P L +V + Y+ S +V +L + + +DE ++++T +EE+
Sbjct: 169 PQLIIV-PPNFDKYQAVSREVKEILTDYDPNFMAMSLDEAYLNITKHLEER 218
>UniRef50_Q9PQ53 Cluster: DNA polymerase IV; n=2; Ureaplasma
parvum|Rep: DNA polymerase IV - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 360
Score = 79.8 bits (188), Expect = 6e-14
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 4/161 (2%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN----IVVTSNYEARNYGVSKCMLV 353
H K I+H+D+D FYA V + +PE ++ P+ + N I+ + NY AR+YGV M +
Sbjct: 5 HQKIIMHLDIDAFYATVSELLHPEYKNFPIAVGSLNSRTGIISSPNYLARSYGVKAAMPI 64
Query: 354 TDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
A ++CPNL ++ E + Y++ S F ++ + +E +DE FID T LV++
Sbjct: 65 FLAKELCPNLIILPSEH-NIYQSYSKHFFQIINKYTNKIEITSIDECFIDATDLVKKYHN 123
Query: 534 NANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
N L + ++ ++ + G IA ++A E+ K
Sbjct: 124 NIRLLATKIQKEIKNKLNLSISIGISYNKTIA-KMATELNK 163
>UniRef50_Q4SL60 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=2; root|Rep: Chromosome 17
SCAF14563, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 671
Score = 79.4 bits (187), Expect = 8e-14
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDALKV 371
+D+DCFY QVE NP L++ P + Q ++ +YEAR +GV++ M V DA K+
Sbjct: 12 VDMDCFYVQVEQRINPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVDDAKKL 71
Query: 372 CPNLKLV-----NGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
CP+L++ +G+ DL YR AS +V V+ + +E+ +DE ++D+T+ V+++LK
Sbjct: 72 CPDLQVARVRESHGKADLTLYREASVEVIEVMSRF-AVIERASIDEAYMDLTAAVQQRLK 130
Query: 534 NAN 542
+ N
Sbjct: 131 DLN 133
>UniRef50_Q4RUQ7 Cluster: Chromosome 12 SCAF14993, whole genome
shotgun sequence; n=10; Eumetazoa|Rep: Chromosome 12
SCAF14993, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 520
Score = 79.4 bits (187), Expect = 8e-14
Identities = 40/112 (35%), Positives = 65/112 (58%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKV 371
++I+H+D+D FYA VEM PEL+D P+ + +++ TSNY AR YGV M A K+
Sbjct: 93 RAIVHVDMDAFYAAVEMRDCPELKDKPMAVGSMSMLSTSNYLARKYGVRAAMPGFIAKKL 152
Query: 372 CPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
CP+L +V + YR S ++ + + + +DE ++D T VE++
Sbjct: 153 CPHLVIV-PTNFDKYRAVSNEIREIFTDYDPGFMPVSLDEAYLDFTEHVEKR 203
>UniRef50_Q6FFG4 Cluster: DNA polymerase IV, devoid of proofreading,
damage-inducible protein P; n=2; Acinetobacter|Rep: DNA
polymerase IV, devoid of proofreading, damage-inducible
protein P - Acinetobacter sp. (strain ADP1)
Length = 351
Score = 79.4 bits (187), Expect = 8e-14
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ---KNIVVTSNYEARNYGVSKCMLVTDA 362
+ IIHID+D FYA VE+ PEL+ +P+ I + ++ ++Y AR YG+ M + A
Sbjct: 2 RKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQA 61
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
K+CP+L ++ + YR S ++ + Q +E L +DE ++DVT + L +A
Sbjct: 62 RKLCPDLIIIE-PNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENL-NNLPSAT 119
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ + Q++ + S G K ++IA++ K
Sbjct: 120 DVAIQIRQQIWEQTSLTASAGVAPN-KFLAKIASDWNK 156
>UniRef50_A2TVA1 Cluster: DNA polymerase IV; n=10; cellular
organisms|Rep: DNA polymerase IV - Dokdonia donghaensis
MED134
Length = 370
Score = 79.4 bits (187), Expect = 8e-14
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDA 362
K IIH+D+D FYA VE + NP+LR + + ++ +V ++YEAR YGV M A
Sbjct: 7 KKIIHVDMDAFYASVEQLDNPDLRGKAIAVGGGGERGVVSAASYEARKYGVRSAMAGALA 66
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
K+CP+L V + YR S ++ V + VE L +DE ++DVT
Sbjct: 67 RKLCPDLIFVK-TNFERYREVSAQIRSVFHEFTDLVEPLSLDEAYLDVT 114
>UniRef50_A0YE03 Cluster: DNA polymerase IV; n=1; marine gamma
proteobacterium HTCC2143|Rep: DNA polymerase IV - marine
gamma proteobacterium HTCC2143
Length = 388
Score = 79.4 bits (187), Expect = 8e-14
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Frame = +3
Query: 105 ITAFNDTNMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI- 281
IT+ N + R +E+ N G + IIH D DCF+ VEM +P L P+ +
Sbjct: 3 ITSVNTVLQEQRRVEN-IPRVNV--GNSQRKIIHCDADCFFVAVEMRDDPSLFGRPVAVG 59
Query: 282 ---QQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQ 452
++ ++ T NYEAR YGV M A ++CP+L +++G ++ Y+ A+ ++ +
Sbjct: 60 GSADRRGVISTCNYEARAYGVGSAMATATARRLCPDLIVLSG-NMEKYKLAASQMRTIFC 118
Query: 453 GWRCPVEKLGMDENFIDVT 509
+ VE L +DE +IDVT
Sbjct: 119 EYSTLVEPLSLDEAYIDVT 137
>UniRef50_Q2LU75 Cluster: DNA polymerase IV; n=1; Syntrophus
aciditrophicus SB|Rep: DNA polymerase IV - Syntrophus
aciditrophicus (strain SB)
Length = 362
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI------QQKNIVVTSNYEARNYGVSKCMLV 353
+ I+HID+D F+A VE R PEL+ P+ I ++ +V T+NYEAR YG+S M +
Sbjct: 14 RRILHIDMDAFFASVEENRKPELKGKPVVIGGMGDPSKRGVVSTANYEARKYGISSAMPL 73
Query: 354 TDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
A K+CP + D +Y S VL +E +G+DE ++D++ E +
Sbjct: 74 RTAYKLCPR-AIFLPVDYKAYLAVSRYFKAVLLNITTIMEDVGIDEAYLDIS---ENRDT 129
Query: 534 NANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ +++ I G +Y + C G K+ ++IA++M K
Sbjct: 130 DEKISEKIKTG-IYEKTGLTCSIGIAPN-KLLAKIASDMNK 168
>UniRef50_Q5FLW9 Cluster: DNA-damage-inducible protein; n=5;
Lactobacillus|Rep: DNA-damage-inducible protein -
Lactobacillus acidophilus
Length = 412
Score = 74.5 bits (175), Expect(2) = 1e-13
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ-------KNIVVTSNYEARNYGVSKCML 350
+ IIH+D+D FYA VE+ R+PE +D L + Q +V T NY AR YGV M
Sbjct: 53 RRIIHLDMDAFYASVEINRHPEYKDKALVVGQDPRDNNGHGVVATCNYVARKYGVHSAMA 112
Query: 351 VTDALKVCPNLKLV-NGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
AL++ P K+V D +YR+ S ++ + VE + +DE ++DVT
Sbjct: 113 SIQALRLVPKDKIVFVPPDFETYRSVSAQIHSFMHEITDQVESIALDEAYLDVT 166
Score = 24.6 bits (51), Expect(2) = 1e-13
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 627 ASQIANEMRKKIYDELGYTTCAGIAHNK 710
A QIA ++K+I EL + G+++NK
Sbjct: 175 AVQIALNLQKRIRAELNLNSSFGVSYNK 202
>UniRef50_UPI00015B431D Cluster: PREDICTED: similar to
ENSANGP00000016819; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000016819 - Nasonia
vitripennis
Length = 1629
Score = 78.6 bits (185), Expect = 1e-13
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 34/205 (16%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
++ ID+DCF+ QVE PE PL + Q N ++ NYEAR++GV++ M +A
Sbjct: 1002 VVLIDMDCFFCQVETRLKPEHAGKPLAVVQYNQWKLGGIIAVNYEARDFGVTRHMRGEEA 1061
Query: 363 LKVCPNLKLV-----NGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
+ CP++ L G+ D YR+A +V VL+ + VE+ +DE ++D+T +V++
Sbjct: 1062 KEKCPDIVLAIVPSQRGKADTSRYRSAGREVIDVLKKYCNIVERASVDEAYLDITQIVDD 1121
Query: 525 KLKNANLNDLIVMGQL-------YSEP----SAECPCGCHN------------RLKIASQ 635
KL ++ + QL +SE + G + RL IA
Sbjct: 1122 KLSKEIIDSDSISKQLENSYIVGFSESDINNEEQRSKGLQDWLSELADDIQIQRLAIAGA 1181
Query: 636 IANEMRKKIYDELGYTTCAGIAHNK 710
+RK++YD G+ AGI+ NK
Sbjct: 1182 FVEHIRKEVYDTTGFRCSAGISFNK 1206
>UniRef50_Q1ZIG5 Cluster: DNA polymerase IV; n=2;
Alteromonadales|Rep: DNA polymerase IV - Psychromonas
sp. CNPT3
Length = 361
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = +3
Query: 183 EHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCML 350
E + IIHID+DCFYA VEM +P+ RD+ L I +++++ T NY AR +GV M
Sbjct: 5 EQQRKIIHIDMDCFYAAVEMRDHPQYRDIALAIGGRVDRRSVLSTCNYLARQFGVHSAMP 64
Query: 351 VTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A ++CP+L ++ G + Y S ++ + + VE L +DE F+DV+
Sbjct: 65 SFKAKQLCPDLVIIAGR-MDVYTQVSKQIREIFYRYTDIVEPLSLDEAFLDVS 116
>UniRef50_Q8XK37 Cluster: DNA polymerase IV; n=29; Bacteria|Rep: DNA
polymerase IV - Clostridium perfringens
Length = 359
Score = 78.6 bits (185), Expect = 1e-13
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIHID+D FYA +E NP+ + PL + ++ +V T +YEAR YG+ M
Sbjct: 5 RKIIHIDMDAFYASIEQRDNPKYKGKPLIVGGDPNRRGVVATCSYEARKYGIHSAMPSLT 64
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A K+CP + + Y+ S +V +L + VE L +DE F+DV+ K +A
Sbjct: 65 AYKLCPKAIFIRPR-MEVYKKVSRQVMNILNEYSNIVEPLSLDEAFVDVSKSKRCK-GSA 122
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
L L + +++ E G K +++A++ RK
Sbjct: 123 TLIALEIKERIFKEVGLTASAGVSFN-KFLAKMASDFRK 160
>UniRef50_A1HLX7 Cluster: DNA-directed DNA polymerase; n=1;
Thermosinus carboxydivorans Nor1|Rep: DNA-directed DNA
polymerase - Thermosinus carboxydivorans Nor1
Length = 382
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
IIH+D+D FYA VE NPE R P+ G+ + +V T++YEAR +GV M + +A +
Sbjct: 5 IIHVDMDAFYAAVEQRDNPEFRGRPVIIGGVGGRGVVATASYEARQFGVRSAMSMAEARR 64
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
CP+ + D Y S ++ +L + VE L +DE F+DVT +
Sbjct: 65 RCPH-GVFLAPDHDKYARISAQIRAILDRFSPLVEPLALDEAFLDVTGM 112
>UniRef50_Q03VU4 Cluster: Nucleotidyltransferase/DNA polymerase for
DNA repair; n=1; Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293|Rep: Nucleotidyltransferase/DNA
polymerase for DNA repair - Leuconostoc mesenteroides
subsp. mesenteroides (strain ATCC 8293 /NCDO 523)
Length = 361
Score = 77.4 bits (182), Expect = 3e-13
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ-------KNIVVTSNYEARNYGVSKCML 350
+ IIH+DLD FYAQ+EM +PELRD+PL I + + +V T+NY AR GV M
Sbjct: 11 RRIIHVDLDAFYAQIEMRDHPELRDLPLIISRDPIESNGRGVVATANYAARKLGVHSAMS 70
Query: 351 VTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKL 530
+A ++ P+ + D Y+ S ++ + + +E + DE ++D+T V L
Sbjct: 71 AAEAKRLAPDAFFMR-PDFQKYKMISQQIHHIFHQYTDKIEPIAFDEAYLDLTDSV---L 126
Query: 531 KNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
A L I Q+ E G K+ +++A+E K
Sbjct: 127 TGATLAAKI-RHQILKETQLTSSIGVSYN-KLLAKLASEFNK 166
>UniRef50_Q9Y253 Cluster: DNA polymerase eta; n=17; Mammalia|Rep:
DNA polymerase eta - Homo sapiens (Human)
Length = 713
Score = 77.4 bits (182), Expect = 3e-13
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDALKV 371
+D+DCF+ QVE +NP LR+ P + Q ++ +YEAR +GV++ M DA K+
Sbjct: 12 VDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKL 71
Query: 372 CPNLKLV-----NGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
CP+L L G+ +L YR AS +V ++ + +E+ +DE ++D+TS V+E+L+
Sbjct: 72 CPDLLLAQVRESRGKANLTKYREASVEVMEIMSRF-AVIERASIDEAYVDLTSAVQERLQ 130
>UniRef50_Q6AL48 Cluster: Probable DNA-damage-inducible protein P;
n=1; Desulfotalea psychrophila|Rep: Probable
DNA-damage-inducible protein P - Desulfotalea
psychrophila
Length = 376
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQ-KNIVVTSNYEARNYGVSKCMLV 353
+ + IIHID+D F+A +E PELR PL G+ + + +V T YEAR YG+ M
Sbjct: 2 YMRKIIHIDMDAFFASIEQRDRPELRKKPLIVGGLPRGRGVVATCCYEARRYGIHSAMSA 61
Query: 354 TDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVE 521
A K+CP+ V + Y+ S ++ + + + VE L +DE F+DVT ++
Sbjct: 62 NRAYKLCPHAVFVKPR-MVLYKEVSLQIMAIFREYTKKVEPLSLDEAFLDVTEYLQ 116
>UniRef50_UPI0000DB6D74 Cluster: PREDICTED: similar to DNApol-
CG7143-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to DNApol- CG7143-PA - Apis mellifera
Length = 429
Score = 76.6 bits (180), Expect = 6e-13
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 36/207 (17%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
++ ID+DCF+ QVE P+ PL + Q N ++ NYEAR YGV++ M +A
Sbjct: 10 VVLIDMDCFFCQVETKLQPQYAGKPLAVVQYNQWQLGGIIAVNYEAREYGVTRHMRGKEA 69
Query: 363 LKVCPNLKLVN-----GE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
+ CP+L LV+ G+ D+ YR+A +V V++ +E+ +DE ++D+T +V +
Sbjct: 70 KEKCPDLILVSVPCLRGKADISRYRSAGCEVINVIKEHCNIIERASVDEAYLDITDMVHK 129
Query: 525 KLK-NANLNDL-------IVMG--QLYSEPSAECPCGCHNRLK---------------IA 629
++ N N ++L V+G ++ E G +K IA
Sbjct: 130 RMSTNLNFSNLATQLSNTFVVGYSEIGKNDEEERSKGTKIWIKNIFEEFEDIEAQKFAIA 189
Query: 630 SQIANEMRKKIYDELGYTTCAGIAHNK 710
I ++R I+D++G+ AGIA NK
Sbjct: 190 GLIVEKIRADIFDKIGFKCSAGIAQNK 216
>UniRef50_Q74H50 Cluster: ImpB/MucB/SamB family protein; n=11;
Bacteria|Rep: ImpB/MucB/SamB family protein - Geobacter
sulfurreducens
Length = 413
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI--QQKNIVVTSNYEARNYGVSKCMLVTDAL 365
++I+HID++ F+A VE NP L+ P+ + + +V T++YEAR +GV M +AL
Sbjct: 9 RTILHIDMNAFFASVEQQANPSLQGKPIAVVGSGRTVVTTASYEARAFGVKTGMNKWEAL 68
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ CP+L LV G D Y S ++ + + + VE +DE F+DVT
Sbjct: 69 QACPHLILVVG-DNRKYTHTSTQINRIFRDFTPEVETFSIDEAFLDVT 115
>UniRef50_Q11UG7 Cluster: DNA polymerase IV; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: DNA polymerase IV -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 385
Score = 76.6 bits (180), Expect = 6e-13
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
+SIIH+DLD F+ VE++R PEL+ PL G ++ +V + +YEAR +G+ M A
Sbjct: 3 RSIIHMDLDSFFVSVELLRRPELKGKPLIIGGSSERGVVASCSYEARKFGIHSAMSSQKA 62
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPV-EKLGMDENFIDVTSL 515
K+CP V G D+ Y S V ++ + PV E+ +DE ++D+T +
Sbjct: 63 KKLCPEAIFVRG-DMQEYSKYSKIVRQIIHD-KAPVYEQASIDEFYLDITGM 112
>UniRef50_Q8EWQ4 Cluster: DNA-damage repair protein MucB; n=1;
Mycoplasma penetrans|Rep: DNA-damage repair protein MucB
- Mycoplasma penetrans
Length = 386
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/120 (31%), Positives = 63/120 (52%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I HID+D F+A VE+ PE +PL + ++ ++NY AR GV M + DA K+CP
Sbjct: 5 IFHIDMDSFFASVELAERPEYEKLPLAVGHL-VIASANYVARGLGVKSAMNIVDAKKICP 63
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDLI 557
L ++ + + Y + S K++ L +E +DE ++DV++ E K L+
Sbjct: 64 QLTIIY-PNKNKYTSMSDKIYSFLSSLSKNIETGSIDEWYLDVSNTQYENWKEIEFASLV 122
>UniRef50_Q39ZU3 Cluster: Damage-inducible protein DinP; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Damage-inducible
protein DinP - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 399
Score = 76.2 bits (179), Expect = 8e-13
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
I+H+D+D FYA VE + +PEL+ P+ G + + +V +YEAR +G+ M ++ AL+
Sbjct: 11 ILHLDMDAFYASVEQLDSPELKGQPVVVGGHRSRGVVCACSYEARTFGIHSAMPMSRALR 70
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTS 512
+CP +V + Y+ S +VF + + VE L +DE F+DVT+
Sbjct: 71 LCPQ-AIVQPVRMARYQEISRQVFDIFGRYTDLVEPLSVDEAFLDVTA 117
>UniRef50_Q3ABL2 Cluster: DNA polymerase IV-AMBIGUITY; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: DNA
polymerase IV-AMBIGUITY - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 391
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQ-QKNIVVTSNYEARNYGVSKCMLVTDAL 365
IIH+D+D F+A VE NPEL+ P+ G+ ++ +V ++YEAR +GV M + +A
Sbjct: 6 IIHVDMDAFFAAVEQRDNPELKGKPVIVGGVPGERGVVAAASYEARKFGVRSAMSLWEAA 65
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
++CP+ + G Y+ S K+F + + + VE + +DE ++DVT
Sbjct: 66 RLCPHGIFIPGNH-KKYQEVSEKIFRIFREYTPLVEPVSLDEAYLDVT 112
>UniRef50_Q4Q8C5 Cluster: DNA polymerase kappa, putative; n=3;
Leishmania|Rep: DNA polymerase kappa, putative -
Leishmania major
Length = 751
Score = 75.8 bits (178), Expect = 1e-12
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Frame = +3
Query: 189 FKSI-IHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
F SI +H+D+D F+A VEM +NP+ +VPLGI +++ T+NY AR YGV M +
Sbjct: 229 FDSIYVHMDMDMFFAAVEMKKNPQYAEVPLGIGSMSMLSTTNYVARKYGVQSGMPGFIGM 288
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP L +V D + R S K V++ + + LGMDE V +++ L + ++
Sbjct: 289 RLCPQLVIV-PTDFAACRVESAKFKGVVREYDPDAQLLGMDE----VMMCLDDYLAHHHV 343
Query: 546 NDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIA 701
+ G R +A ++ E R++I + G T AGIA
Sbjct: 344 DVTTHAG----------------RFDVAERVIEECRRRIAEATGLTVSAGIA 379
>UniRef50_Q7USY7 Cluster: DNA polymerase IV; n=1; Pirellula sp.|Rep:
DNA polymerase IV - Rhodopirellula baltica
Length = 396
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
I+H+D+D FYA VE PELR P+ G + + +V ++YEAR YG+ M + A+K
Sbjct: 2 ILHVDMDAFYASVEQRDRPELRGRPVVVGGSEGRGVVTAASYEAREYGIHSAMPGSRAIK 61
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
+CP+ V G L Y + V + + V+ L +DE F+DV+ +
Sbjct: 62 LCPHADFVRGR-LDHYASVGRAVREIFHRFTPVVQPLSLDEAFLDVSGTI 110
>UniRef50_Q97SC7 Cluster: DNA polymerase IV; n=37; Bacilli|Rep: DNA
polymerase IV - Streptococcus pneumoniae
Length = 353
Score = 66.9 bits (156), Expect(2) = 1e-12
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ-------KNIVVTSNYEARNYGVSKCML 350
+ IIHID+D F+A VE+ NP+LR P+ I + +V T +YEAR +GV M
Sbjct: 12 RKIIHIDMDAFFAAVEIRDNPKLRGKPVIIGSDPRQTGGRGVVSTCSYEARAFGVHSAMS 71
Query: 351 VTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+A + CP ++G + Y++ ++ + + + +E + +DE ++DVT
Sbjct: 72 SKEAYERCPQAVFISG-NYEKYKSVGLQIRAIFKRYTDLIEPMSIDEAYLDVT 123
Score = 29.1 bits (62), Expect(2) = 1e-12
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
+K A +IA ++K I+ EL T AG+++NK
Sbjct: 129 IKSAVKIARLIQKDIWQELHLTASAGVSYNK 159
>UniRef50_A0LDH9 Cluster: DNA-directed DNA polymerase; n=1;
Magnetococcus sp. MC-1|Rep: DNA-directed DNA polymerase
- Magnetococcus sp. (strain MC-1)
Length = 357
Score = 67.7 bits (158), Expect(2) = 1e-12
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
+ IIHID+D F+A VE P L+ P+ G+ + +V ++YEAR +G+ M + A
Sbjct: 4 RKIIHIDMDAFFASVEQRDFPHLQGKPVVVGGLGPRAVVAAASYEARQFGIHSAMPMGRA 63
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+C L + G + +Y+ S + + Q + +E L +DE ++DVT
Sbjct: 64 KNLCDQLIIQPGR-MQTYKNESHHIHAIFQRYTNLIEPLSLDEAYLDVT 111
Score = 27.9 bits (59), Expect(2) = 1e-12
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
L A+QIA +++ I++E T AGI+ NK
Sbjct: 117 LNSATQIAQQIKTAIWEETHLTASAGISVNK 147
>UniRef50_Q7NAR2 Cluster: UmuC/DinP-like; n=1; Mycoplasma
gallisepticum|Rep: UmuC/DinP-like - Mycoplasma
gallisepticum
Length = 405
Score = 75.4 bits (177), Expect = 1e-12
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQK---NIVVTSNYEARNYGVSKCMLVTDA 362
K+I HID D F+A VE NPE + PL + K +IV ++NY AR +GV M + A
Sbjct: 11 KTIFHIDFDAFFASVEENFNPEYNNKPLVVGSKSNGSIVSSANYIARKFGVRSAMPIFQA 70
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGW-RCPVEKLGMDENFIDVTSLVEEKLKNA 539
K+CP+L ++ D Y S VF L+ + +E +DE ++DVT ++ EK
Sbjct: 71 KKLCPSL-IIAEVDYPKYERVSAYVFSYLRDFVSNKMEVASIDECYMDVTDIL-EKNSEI 128
Query: 540 NLNDLI--VMGQLYSEPSAECPCGCHNRLKIASQIANE 647
+ +DL + Q+Y G + L +A +++
Sbjct: 129 SASDLAKKIQKQIYELTQLTVSIGISSNLFLAKMASDQ 166
>UniRef50_A2QTI4 Cluster: Contig An09c0050, complete genome; n=6;
Eurotiomycetidae|Rep: Contig An09c0050, complete genome
- Aspergillus niger
Length = 1165
Score = 74.9 bits (176), Expect = 2e-12
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL----GIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D DCF+A V ++ PEL+ P+ G + + + NYEAR +G+ M + AL
Sbjct: 374 IMHVDFDCFFAAVSTLKRPELQGKPVAVAHGTGSGSEIASCNYEARAHGIKNGMWMKGAL 433
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
+ CP LK+V D +Y AS K + + V+ + +DE +D+T+ E +
Sbjct: 434 QTCPELKVV-PYDFPAYEEASRKFYSAILSVDGIVQSVSIDEALVDITTQCLE--AGGSD 490
Query: 546 NDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
I G LY E + A +IA+E+R + E G GI N
Sbjct: 491 GRGISEGSLYREQAR------------ADEIADELRATVKKETGCAVSVGIGGN 532
>UniRef50_O74944 Cluster: DNA polymerase kappa; n=1;
Schizosaccharomyces pombe|Rep: DNA polymerase kappa -
Schizosaccharomyces pombe (Fission yeast)
Length = 547
Score = 74.9 bits (176), Expect = 2e-12
Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I+H+D D FYA +E ++NP+L+ +P+ + K+++ T+NY AR +GV M A K+CP
Sbjct: 132 IVHVDCDAFYASIEELKNPKLKSLPMAV-GKSVLCTANYVARKFGVRSAMPEFIARKICP 190
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTS---LVEEKLKNANLN 548
+L +V +L Y S ++ VL + + +DE ++++TS L E N+
Sbjct: 191 DL-VVIPLNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTSHLRLQELAFTVENIT 249
Query: 549 DLI--VMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
++ + Q++ E CG K+ ++IA+ RK
Sbjct: 250 MVVEKIRKQVHEETGVTVSCGIAAN-KLLAKIASNKRK 286
>UniRef50_Q6DCL9 Cluster: Polh-prov protein; n=6; Tetrapoda|Rep:
Polh-prov protein - Xenopus laevis (African clawed frog)
Length = 684
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDALKV 371
+D+DCFY QVE NP L++ P+ + Q ++ +YEAR +GV++ M DA K+
Sbjct: 12 VDMDCFYVQVEQRMNPALKNKPVVVVQYKTWKGGGIIAVSYEARAFGVTRNMFADDAKKL 71
Query: 372 CPNLKL-----VNGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
C +L+L +G+ DL YR AS +V V+ + VE+ +DE +ID+T V+++L+
Sbjct: 72 CADLQLARVREAHGKADLTHYREASVEVMEVMSRF-AVVERASIDEAYIDLTDSVQKRLR 130
>UniRef50_Q4Q8C4 Cluster: DNA polymerase kappa, putative; n=3;
Leishmania|Rep: DNA polymerase kappa, putative -
Leishmania major
Length = 598
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/108 (36%), Positives = 59/108 (54%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPN 380
IHID+D FYA VE + P LR P G+ + ++ T+NY AR YGV M K+CP
Sbjct: 146 IHIDMDMFYAAVEEKKTPSLRGKPFGVGSQQMLSTTNYIARQYGVRSGMPGFIGKKLCPE 205
Query: 381 LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
L +V D +Y+ + +V + + +G+DE +DVT ++E
Sbjct: 206 LIIV-PNDFPAYQREAARVHSIASRYDAQFVSVGLDELTMDVTKYLQE 252
>UniRef50_Q6F1D8 Cluster: DNA polymerase IV; n=1; Mesoplasma
florum|Rep: DNA polymerase IV - Mesoplasma florum
(Acholeplasma florum)
Length = 370
Score = 74.1 bits (174), Expect = 3e-12
Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN---IVVTSNYEARNYGVSKCMLVTDA 362
K I+H+D+D F+A E + L++ P+ + + N I+V ++Y+AR YG+ + +A
Sbjct: 4 KVILHLDMDAFFASCEQAHDKTLKNKPVVVARNNDRSIIVAASYDARKYGIKAGTPIFEA 63
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
++ ++ + Y S ++F L+ + + VE LG+DE FID T+ + EK N
Sbjct: 64 KQLAYGELIIKEGNRDLYEEYSERIFNLIKEQFTYKVEVLGIDECFIDATN-IWEKYGNV 122
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
L + +Y E C G + ++ S++ ++M+K
Sbjct: 123 QNLCLAIQAAVYQETGLTCSIGA-SFTRLFSKMGSDMKK 160
>UniRef50_A5FSS1 Cluster: DNA-directed DNA polymerase; n=3;
Dehalococcoides|Rep: DNA-directed DNA polymerase -
Dehalococcoides sp. BAV1
Length = 390
Score = 74.1 bits (174), Expect = 3e-12
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ ++H+DLD F+ VE PE +D P+ + +++ +V ++YEAR +G+ M +
Sbjct: 4 RRVMHVDLDAFFVSVEQAVRPEFKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLIT 63
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A +CP + G YR S K L+L + +E +G+DE +++VT A
Sbjct: 64 AKHLCPQAIFIEGNH-QLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIA 122
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ I ++ +E G N K+A++IA E K
Sbjct: 123 QMASKI-RRRITAELGINASIGIANS-KVAAKIATEQAK 159
>UniRef50_Q7PXH4 Cluster: ENSANGP00000016819; n=2; Culicidae|Rep:
ENSANGP00000016819 - Anopheles gambiae str. PEST
Length = 877
Score = 73.7 bits (173), Expect = 4e-12
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Frame = +3
Query: 153 SCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYE 317
S T I + + ++ +D+DCFY QVE NP +R P+ + Q N ++ NY
Sbjct: 2 STKTTINIKNKFDRVVVLVDMDCFYCQVEEKLNPAIRGKPIAVVQYNPWQGGGIIAVNYP 61
Query: 318 ARNYGVSKCMLVTDALKVCPNLKL-----VNGE-DLHSYRTASGKVFLVLQGWRCPVEKL 479
AR GV++ M +A + CP ++L V G+ DL YR A +V VL+ + +E+
Sbjct: 62 ARAEGVTRHMRGDEAKQHCPEIELPQVPQVRGKADLTRYREAGKEVADVLKSFTPLLERA 121
Query: 480 GMDENFIDVTSLV---------------EEKLKNA------NLNDLIV-MGQLYSEPSAE 593
+DE ++D+T V EKL N N+ + I + +
Sbjct: 122 SIDEAYLDITERVLTRIHEMNEGKFQLRPEKLANTFAVGYENIGEFITKLSNTFDPAGGT 181
Query: 594 CPCGCHNRLK---------IASQIANEMRKKIYDELGYTTCAGIAHNK 710
RL+ + + I NE+R + + G+ AGIAHNK
Sbjct: 182 AESNSQERLEYKKSDIKLLVGASIVNEIRAAVKERTGFECSAGIAHNK 229
>UniRef50_Q54KS3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 517
Score = 73.7 bits (173), Expect = 4e-12
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKV 371
++ IHID+D FYA VE + N EL P+ + +++VTSNY AR YGV + A+K+
Sbjct: 81 RTFIHIDMDAFYANVEEMDNKELIGHPVAVGSIDMLVTSNYAARAYGVRSGLPGLLAMKL 140
Query: 372 CPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLND 551
CP+L ++ + YR S + +L + +DE ID+T +++ N NL
Sbjct: 141 CPHL-IILPSRMDRYREVSLIIRNILYKFDKNYVSPSLDEGCIDITEYLKD---NENLTG 196
Query: 552 LIVMGQLYSEPSAECPCGCHNRLK---IASQIANEMRK 656
+ V QL ++ + C + + S+I++E+ K
Sbjct: 197 IDVANQLQNDIFEKTTLTCSMGISCSPLLSKISSEINK 234
>UniRef50_O17219 Cluster: Polh (Dna polymerase eta) homolog protein
1; n=2; Caenorhabditis|Rep: Polh (Dna polymerase eta)
homolog protein 1 - Caenorhabditis elegans
Length = 584
Score = 73.7 bits (173), Expect = 4e-12
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQ------KNIVVTSNYEARNYGVSKCMLVTDALK 368
ID+DCFYAQVE NP L P+ + Q + ++ +YEAR +GV + M V +A
Sbjct: 8 IDMDCFYAQVEQRDNPSLWGQPVIVVQHSRQGIEGGILAVSYEARPFGVKRGMTVAEAKL 67
Query: 369 VCPNLKL--------VNGEDLHSYRTASGKVFLVLQGW--RCPVEKLGMDENFIDVTSLV 518
CP + + V+ D+ YR AS +VF VL + + +EK +DE F+D+++
Sbjct: 68 KCPQISICHVPIGEYVDKADIQKYRDASAEVFRVLNNYDSQIIIEKASVDEAFLDLSAYT 127
Query: 519 EEKLKNANLND 551
+KL+ N+
Sbjct: 128 NQKLQELRENE 138
>UniRef50_A7S226 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 345
Score = 73.7 bits (173), Expect = 4e-12
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDALKV 371
+D+DCFY QVE R PEL+ P + Q N ++ +YEAR GV++ M +A +
Sbjct: 11 VDMDCFYVQVEQRRCPELKGKPCAVVQYNAWKGGGIIAVSYEARACGVTRNMRGDEAKQK 70
Query: 372 CPNLKLV-----NGE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLK 533
CP++ LV G+ +L YR A +V VL + E+ +DE ++D+T+ ++KL
Sbjct: 71 CPDIALVQVPVLRGKANLAHYRDAGAEVLEVLTTYCDNCERASVDEAYLDLTNSAQKKLS 130
Query: 534 --------------------NANLNDLIVMGQLYSEPSAECPCGCHNR-LKIASQIANEM 650
++ +D + +L E ++ + R L + IA EM
Sbjct: 131 VMTVPEIAEEVWRTTAIEGLSSKGSDTTISDELQKEWLSQLEASPYLRNLAAGAVIAAEM 190
Query: 651 RKKIYDELGYTTCAGIAHNK 710
R + ++ G+T AG+A NK
Sbjct: 191 RHAVLEKTGFTCSAGVATNK 210
>UniRef50_A0JV83 Cluster: DNA-directed DNA polymerase; n=12;
Actinobacteria (class)|Rep: DNA-directed DNA polymerase
- Arthrobacter sp. (strain FB24)
Length = 408
Score = 65.3 bits (152), Expect(2) = 5e-12
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDAL 365
SI+H+D+D F+ VE+ PEL P+ + +++V++++YEAR +GV M + A
Sbjct: 21 SIMHVDMDAFFVSVELRSRPELVGKPVIVGYPADRSVVLSASYEARKFGVKSAMPMAMAA 80
Query: 366 KVCPNLKLVNGEDLHS-YRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
++CP+ ++ E H Y S ++ + VE L +DE F+DV
Sbjct: 81 RICPSAVII--EPRHKLYYEVSAQLMAIFGSITDLVEPLSVDEAFLDV 126
Score = 28.3 bits (60), Expect(2) = 5e-12
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 603 GCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
G RL +I +R+++ DELG T GIA +K
Sbjct: 128 GAIRRLGSPREIGAIIRRRVRDELGITASVGIAASK 163
>UniRef50_UPI0000DB76DA Cluster: PREDICTED: similar to Rev1
CG12189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Rev1 CG12189-PA - Apis mellifera
Length = 844
Score = 73.3 bits (172), Expect = 5e-12
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Frame = +3
Query: 84 KLKKAKLITAFNDTNMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELR 263
KLK KL D+ + N N+ID I+HID+DCF+ V + PEL+
Sbjct: 189 KLKDKKLNRLLFDSQLSINNELIDLQEENKIDINQDCVIMHIDMDCFFVSVGLRDKPELK 248
Query: 264 DVPLGIQ----QKNI-----VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSY 416
+P+ + KN + + +YEAR GV M + +ALK+CP+L+ + + Y
Sbjct: 249 GLPVAVTHAKGNKNSCSLSEIASCSYEARKAGVKNGMFLGEALKICPDLRTI-PYNFEGY 307
Query: 417 RTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
S ++ + + +E + DE + D T ++EE
Sbjct: 308 TKVSYILYDTVASYTLDIEAVSCDEMYADCTKILEE 343
>UniRef50_Q73P36 Cluster: DNA polymerase IV; n=1; Treponema
denticola|Rep: DNA polymerase IV - Treponema denticola
Length = 395
Score = 73.3 bits (172), Expect = 5e-12
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
K H+D+D F+A VE + NPE P+ G ++ +V T +YEAR +GV M + A
Sbjct: 5 KVFFHVDIDAFFASVEQLDNPEYMGKPVIVGGQSERGVVSTCSYEARKFGVHSAMPILQA 64
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
K+CP+ + G + Y S +V + + + ++++ +DE F+++T + EK+
Sbjct: 65 RKLCPSGIFLRGR-MDRYHEKSKEVMSIFKDFTPEIKQISVDEAFLNMTGM--EKIFGTP 121
Query: 543 LND-LIVMGQLYSEPSAECPCGCHNRLKIA 629
N L++ + E GC IA
Sbjct: 122 KNSALLLKKTIKEETGLTVSVGCAQNKYIA 151
>UniRef50_Q1IRF1 Cluster: DNA-directed DNA polymerase; n=2;
Acidobacteria|Rep: DNA-directed DNA polymerase -
Acidobacteria bacterium (strain Ellin345)
Length = 425
Score = 73.3 bits (172), Expect = 5e-12
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTDAL 365
I H+D+D F+ VE + +P L+ + + ++ +V ++Y AR +GV M + A
Sbjct: 18 IFHVDMDAFFVSVEELFDPSLKGKAVVVGGHRDERGVVSAASYAARKFGVHSAMPLRTAA 77
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
K+CP+ VNG YR SGK F VL+ + VE +DE ++D+T E+L L
Sbjct: 78 KLCPDAIFVNGHP-ERYREYSGKAFEVLKKFSPKVEMASIDEAYLDMTG--TERLHGPPL 134
Query: 546 NDLIVMGQ-LYSEPSAECPCGCHNRLKIASQIANEMR 653
+ Q + SE C G IA +++ +
Sbjct: 135 KAAHALHQFMKSETKLNCSIGIGTSRLIAKVCSDQAK 171
>UniRef50_A5WGS2 Cluster: DNA-directed DNA polymerase; n=2;
Psychrobacter|Rep: DNA-directed DNA polymerase -
Psychrobacter sp. PRwf-1
Length = 369
Score = 72.5 bits (170), Expect = 9e-12
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIH+D+D FYA VE NP+LR PL + + +V ++YE R +GV M +
Sbjct: 17 RKIIHLDMDAFYASVEQRDNPQLRGKPLVVGGDPSGRGVVAAASYEIRKFGVRSAMSCYE 76
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A + CP V YR S ++ ++ VE L +DE ++DVT ++ +A
Sbjct: 77 AKRRCPEAIFVRPR-FEVYRQVSQQIRDIMLSLTDLVEPLSLDEAYLDVTG-IKAHHGSA 134
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
L + Q+Y + G K+ ++IA+++ K
Sbjct: 135 TLMANWLRAQIYEQTQLRASAGVSFN-KMLAKIASDINK 172
>UniRef50_A5N2U5 Cluster: DinB; n=3; Clostridium|Rep: DinB -
Clostridium kluyveri DSM 555
Length = 400
Score = 72.5 bits (170), Expect = 9e-12
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVTDA 362
I +D++ F+ E R+PE+ P + + I++T+NYEAR +GV M++
Sbjct: 5 IFLVDMNAFFISCESTRHPEIIGKPAAVAGDPKNRSGIILTANYEARKFGVKTTMVLHKV 64
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
LK+CPN+ ++ D Y+ S +V +L + +EK +DE ++D+T E +
Sbjct: 65 LKLCPNI-IIIPPDHCFYKQKSKEVMGILSKYTPVIEKNSIDEAWLDMTG-CERIFGRSY 122
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKI 662
+M + SE +C G K +++A++M+K +
Sbjct: 123 QTAECIMKHINSELGLDCSIGISEN-KFLAKMASQMKKPL 161
>UniRef50_A2YGF9 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 1176
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN------IVVTSNYEARNYGVSKCMLVT 356
+IIHID+DCF+ V + PEL D P+ + + + ++NY ARNYG+ M V
Sbjct: 345 TIIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVR 404
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
+A CP+L +V D +Y + + + +L + V+ L DE F+D+T + +
Sbjct: 405 EAKARCPHLMIV-PYDFDAYGEVADQFYGILHKYCSKVQALSCDEAFLDMTECLHD 459
>UniRef50_A2FMN4 Cluster: ImpB/MucB/SamB family protein; n=1;
Trichomonas vaginalis G3|Rep: ImpB/MucB/SamB family
protein - Trichomonas vaginalis G3
Length = 519
Score = 72.1 bits (169), Expect = 1e-11
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDALKV 371
+H DLD F+A VE + +P L+ G ++ I+ TS+YEAR YGV M V A+K+
Sbjct: 92 MHCDLDSFFASVEALLDPSLKGTAFAVGGSVKRGIISTSSYEARKYGVRSGMAVFVAMKL 151
Query: 372 CPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLND 551
CP+L +V+ Y S +V V + + G DE +D+T L+ + L + L
Sbjct: 152 CPHLNVVHYNHGDKYMNFSKQVQEVFKKYDPEFVSFGCDEATLDITPLLNDNLHSDQLAK 211
Query: 552 LIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
I +++ + G + ++ S+IA+++ K
Sbjct: 212 QI-QQEVFDKTKLTVSIGVAHTPQL-SKIASDINK 244
>UniRef50_P75241 Cluster: Uncharacterized protein MG360 homolog;
n=3; Mycoplasma|Rep: Uncharacterized protein MG360
homolog - Mycoplasma pneumoniae
Length = 412
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Frame = +3
Query: 204 HIDLDCFYAQVEMVRNPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+ D D F+A VE + NPEL++ PL + +++V T NY AR+YG+ M + AL++C
Sbjct: 22 YFDFDAFFASVEEIENPELKNQPLIVGNRTSRSVVSTCNYLARSYGIKSGMPIAKALELC 81
Query: 375 PNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLND 551
P +YR S K+F ++ + + V L +DE F+ L K +
Sbjct: 82 PQAIFATSH-FRNYRKYSAKIFAMIAEQFNLEVHTLSIDEGFVCFRDLSPRKAFSLAKR- 139
Query: 552 LIVMGQLYSEPSAECPCGCHNRLKIASQIANEMR 653
+ +Y + + G N+ +A +N+ +
Sbjct: 140 --IQRHVYEQLNFHISIGISNQFTLAKIFSNQAK 171
>UniRef50_UPI00004984F2 Cluster: deoxycytidyl transferase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: deoxycytidyl
transferase - Entamoeba histolytica HM-1:IMSS
Length = 708
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ--KNIVVTS-NYEARNYGVSKCMLVT 356
++ I+H+D+D F+A V + ++ EL+ P+ + N V+S NYEAR YG+ M +
Sbjct: 168 NYSKIMHVDIDSFFASVTISKHTELQGKPVVVSHGGNNADVSSCNYEARKYGIKNGMWLK 227
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVE 521
A +CP L +V G D Y + K++ +L + +E L DE ID++S+ E
Sbjct: 228 QAYNLCPQL-IVVGYDFDEYEKVALKMYEILTKYFHNIEVLSCDECIIDISSVPE 281
>UniRef50_A7H6L7 Cluster: DNA-directed DNA polymerase; n=4;
Cystobacterineae|Rep: DNA-directed DNA polymerase -
Anaeromyxobacter sp. Fw109-5
Length = 399
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
++I+H+DLD F+A VE + + LR P+ G ++ +V ++YEAR +GV M A
Sbjct: 5 RTILHLDLDAFFASVEQLDDASLRGRPVIVGGPSRRGVVCAASYEARRFGVRSAMPTAQA 64
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTS 512
K+CP V Y S +VF + + + VE L +DE F+DVT+
Sbjct: 65 RKLCPEGTFV-APRFARYAELSERVFGIYRRYTPLVEPLSLDEAFLDVTA 113
>UniRef50_A4ECH9 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 417
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+DLD F+A VEM+ +PE R PL + + +V T +YEAR +GV M +A ++C
Sbjct: 29 MDLDAFFASVEMLDHPEWRGKPLIVGGDADSRGVVSTCSYEARRFGVHSAMPSAEARRLC 88
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
P +G YR S +V +L VE++ +DE FID+T
Sbjct: 89 PQAIWTHGH-FDRYREVSAQVMAILADETPRVERVSIDEAFIDIT 132
>UniRef50_A4RBE3 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 668
Score = 70.9 bits (166), Expect = 3e-11
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I HIDLD FYAQ EMVR D PL +QQ ++ NY AR +G+S+ + DALK+CP
Sbjct: 50 ISHIDLDAFYAQCEMVRLGVDEDRPLAVQQWQGLIAVNYPARKFGISRHCAIDDALKLCP 109
Query: 378 NLKLVN------GEDLHSYR------TASGKVFL----------------VLQGWRCPVE 473
L++ + G++ +YR A+ KV L L +C VE
Sbjct: 110 ELQVQHVATWREGDNTWAYRGDAAANIATDKVSLDPYRLQSRTILALIKECLPPHQCKVE 169
Query: 474 KLGMDENFIDVTSLVEEKL 530
K +DE FID+++ V KL
Sbjct: 170 KASIDEVFIDLSANVHSKL 188
Score = 33.1 bits (72), Expect = 6.9
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
L IAS+I ++R+ I+ L YT AG+A NK
Sbjct: 243 LLIASEITRDIRQTIFTRLKYTCSAGVAGNK 273
>UniRef50_Q0AX85 Cluster: DNA-directed DNA polymerase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
DNA-directed DNA polymerase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 393
Score = 70.5 bits (165), Expect = 4e-11
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPL----GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
+I+H DLD F+A VE + NP LR P+ + + +V T +YEAR +G+ M + A
Sbjct: 6 NILHCDLDAFFASVEQLDNPSLRGKPVVVGGSMHSRGVVSTCSYEARKFGIRSAMPIAQA 65
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
++CP + ++ Y S +VF +L + E + +DE F+D++ +
Sbjct: 66 YRLCPQAVFL-PVNMPRYLEISKQVFSILSRYSPIKEIISIDEAFLDISG-CSSLYGSPE 123
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
++ Q+YSE G K +++A++M K
Sbjct: 124 KIGCLINEQVYSELGLTISVGISYN-KFLAKLASDMDK 160
>UniRef50_Q5QZ82 Cluster: DinP; n=2; Idiomarina|Rep: DinP -
Idiomarina loihiensis
Length = 356
Score = 70.1 bits (164), Expect = 5e-11
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTDA 362
+ I +DLD F+A E +R+P L+ P + ++ +V T+NY AR +GV M + A
Sbjct: 6 RKIALLDLDAFFASAEELRDPSLKTRPFAVGGGGERGVVATANYLARQFGVKSAMPGSHA 65
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
++CP L + D + YR S KV +L+ +E +DE ++D+T L E K +
Sbjct: 66 RRLCPQLTFIR-PDGNYYRELSDKVLDILRELTPRIEPASIDEFYLDLTHL--EGFKGSA 122
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ + + G N+ K+ ++IA+E RK
Sbjct: 123 TLAMDFVREQIKTLGITGSAGISNQ-KMVAKIASEERK 159
>UniRef50_A0D236 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 591
Score = 70.1 bits (164), Expect = 5e-11
Identities = 41/151 (27%), Positives = 74/151 (49%)
Frame = +3
Query: 204 HIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNL 383
H D+D FY E++ PEL+D P+ + Q IV T+NY AR +GV M A K+CP +
Sbjct: 90 HFDMDMFYVACELLDKPELKDKPVAVGQ-TIVSTANYVARKFGVRSAMPGFVAKKLCPEI 148
Query: 384 KLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDLIVM 563
+ Y++ S +L+ + +E +G+DE +D+T + ++ + +
Sbjct: 149 IFIPCH-FEKYKSVSNIFMTILKKYDDNLESMGLDEANLDLTEYINNSQEDPAILCENIR 207
Query: 564 GQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ CG K+ +++A+E+ K
Sbjct: 208 KDILLATQLTASCGVGPN-KMIAKLASEINK 237
>UniRef50_P58965 Cluster: DNA polymerase IV; n=11; Clostridia|Rep:
DNA polymerase IV - Thermoanaerobacter tengcongensis
Length = 384
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
+ IIH+D+D F+A +E NPE R P+ G+ + +V T +YEAR YG+ M + A
Sbjct: 3 RKIIHVDMDAFFASIEQQDNPEYRGKPVIVGGLSGRGVVSTCSYEARKYGIHSAMPMYMA 62
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
K+CP + Y S ++F +L VE + +DE ++DVT
Sbjct: 63 KKLCPQ-GIFLPVRRKRYEEVSEQIFRILYDITPFVEPVSIDEAYLDVT 110
>UniRef50_Q98JM5 Cluster: DNA polymerase IV 2; n=2;
Mesorhizobium|Rep: DNA polymerase IV 2 - Rhizobium loti
(Mesorhizobium loti)
Length = 415
Score = 70.1 bits (164), Expect = 5e-11
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+I+H DLD FYA VE + +P LR P+ + +V+ ++YEAR +GV M A ++C
Sbjct: 6 TILHADLDAFYASVEQLLDPSLRGKPIAV-GGGVVLAASYEARAFGVRGGMPGRKARELC 64
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
P L V G H Y+ VL + VE++ +DE F DV
Sbjct: 65 PQLIFVGGNFSH-YQRLGDAAIKVLDDFTPVVERISIDEAFADV 107
>UniRef50_Q41FB7 Cluster: DNA-directed DNA polymerase; n=1;
Exiguobacterium sibiricum 255-15|Rep: DNA-directed DNA
polymerase - Exiguobacterium sibiricum 255-15
Length = 360
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIH+D+D FYA VE P L+ VP+ + + +V T +YEAR YG+ M
Sbjct: 4 RKIIHVDMDAFYASVEQRDRPHLKGVPVIVGGPPHARGVVATCSYEARKYGIHSAMPSRR 63
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A ++CP V YR S ++ + VE L +DE ++DVT
Sbjct: 64 AFQLCPRAVFVRPR-FEVYRAVSAQIMELFLEVTPLVEPLSLDEAYLDVT 112
>UniRef50_A1I8E9 Cluster: DNA-directed DNA polymerase; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
DNA-directed DNA polymerase - Candidatus Desulfococcus
oleovorans Hxd3
Length = 384
Score = 69.7 bits (163), Expect = 7e-11
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRD--VPLGIQQ-KNIVVTSNYEARNYGVSKCMLVTDALK 368
I+H+D+D F+A VE + +PE R V +G + +V ++YEAR +GV M ++ ALK
Sbjct: 2 ILHVDMDAFFASVEQLDHPEWRGRAVVVGRSSGRGVVAAASYEARVFGVHSAMPMSRALK 61
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLN 548
+CP+ +V + Y+ S +V +L VE++ +DE ++D++ E
Sbjct: 62 LCPD-AIVAPPRMERYKEVSARVMEILDAVSPLVEQVSIDEAYLDISG-CERLHGTPETI 119
Query: 549 DLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ Q++ C G +K ++IA++M K
Sbjct: 120 GKNIKKQVFDTLGITCSVGV-APIKFLAKIASDMNK 154
>UniRef50_Q384G8 Cluster: DNA polymerase kappa, putative; n=11;
Trypanosoma brucei|Rep: DNA polymerase kappa, putative -
Trypanosoma brucei
Length = 572
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/107 (35%), Positives = 62/107 (57%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPN 380
IH+D+D FYA VE+ ++PE +PL I + T+NY AR G+ + M ALK+CPN
Sbjct: 136 IHLDMDMFYAAVEIKKHPEYATIPLAIGTMTRLQTANYIARGRGIRQGMPGFLALKICPN 195
Query: 381 LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVE 521
L ++ +D SY S V ++ + +G+DE ++V++ +E
Sbjct: 196 LLILPPDD-DSYNEESNTVRRIVAEYDPNYIVVGLDELALEVSAYIE 241
>UniRef50_Q1E8M0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1021
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQ----KNIVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D D F+A V + +NPEL D P+ I + + + NY AR +G+ M + AL
Sbjct: 350 ILHVDFDSFFAAVSIRKNPELADKPVAIAHGTGAGSEIASCNYPARAFGIQNGMWMQGAL 409
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
++CP+LK++ D +Y AS K + + V+ + +DE +D+T L E
Sbjct: 410 QMCPDLKVL-PYDFAAYEDASRKFYEAILDIDGIVQSVSIDEALVDITKLCLE 461
>UniRef50_P34409 Cluster: DNA polymerase kappa; n=2;
Caenorhabditis|Rep: DNA polymerase kappa -
Caenorhabditis elegans
Length = 518
Score = 69.3 bits (162), Expect = 9e-11
Identities = 43/142 (30%), Positives = 69/142 (48%)
Frame = +3
Query: 93 KAKLITAFNDTNMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVP 272
K +L TA + + + E + + + ID+D ++A VEM NP LR VP
Sbjct: 50 KNRLQTATREERQKSEILMENLEMKLESSRDLSRDCVCIDMDAYFAAVEMRDNPALRTVP 109
Query: 273 LGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQ 452
+ + ++ TSNY AR +GV M + K+CP+L +V G + Y S + +
Sbjct: 110 MAVGSSAMLSTSNYLARRFGVRAGMPGFISNKLCPSLTIVPG-NYPKYTKVSRQFSQIFM 168
Query: 453 GWRCPVEKLGMDENFIDVTSLV 518
+ V + +DE FID+T V
Sbjct: 169 EYDSDVGMMSLDEAFIDLTDYV 190
>UniRef50_A6X583 Cluster: DNA-directed DNA polymerase; n=3;
Rhizobiales|Rep: DNA-directed DNA polymerase -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 453
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPL--GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
S+ HID D FYA VE NPELRD PL G ++ +V T+ Y AR +GV M + AL+
Sbjct: 56 SLAHIDCDAFYASVEKRDNPELRDKPLIIGGGKRGVVSTACYLARIHGVRSAMPMFKALE 115
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
CP+ +V ++ Y +V +++ VE L +DE F+D++
Sbjct: 116 ACPDAVVVK-PNMEKYVRVGREVRQMMRDLTPLVEPLSIDEAFLDLS 161
>UniRef50_A0LG84 Cluster: DNA-directed DNA polymerase; n=4;
Deltaproteobacteria|Rep: DNA-directed DNA polymerase -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 425
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVP--LGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
+ I+H+D+D FYA VE PE + P +G ++ +V ++YEAR +GV M V A
Sbjct: 35 RRIMHVDMDAFYASVEQADRPEFKGKPVIVGGARRGVVSAASYEARRFGVHSAMPVFQAK 94
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
++CP + + Y+ S V +L G VE++ +DE F+D+T
Sbjct: 95 RLCPG-GIFLPVRMGRYKEVSKVVMDILCGISPLVEQISIDEAFVDIT 141
>UniRef50_Q5K8U2 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 658
Score = 68.9 bits (161), Expect = 1e-10
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKV 371
++IIH+D+D FYA VE+ R+P L+ G+ K ++ T++YEAR +GV M A K+
Sbjct: 219 QTIIHVDMDAFYASVEVQRDPSLKGKAFGV-GKGVLCTASYEARKFGVRSAMAGFIAKKL 277
Query: 372 CPNLKLVNGEDLH--SYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
CP++ L DLH Y AS V VL + + +DE ++++T
Sbjct: 278 CPHIILT---DLHFDLYTKASKAVKEVLVQYDENLMMASLDEGYLNIT 322
>UniRef50_Q2L7B2 Cluster: REV1; n=5; Neurospora|Rep: REV1 -
Neurospora crassa
Length = 1343
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN----IVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D D F+ V + + PE RD P + N + + NY AR +GV M + AL
Sbjct: 368 IMHVDFDSFFCAVSLKKAPEYRDKPAVVAHGNGKGSEIASCNYPARKFGVKNGMWMKHAL 427
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
++CP+LK++ D Y AS + + + G V+ + +DE IDVT +V
Sbjct: 428 ELCPDLKIL-PYDFPGYEEASRQFYDAILGIGGVVQSVSIDEALIDVTDIV 477
>UniRef50_Q9VNX1 Cluster: CG7143-PA; n=3; Sophophora|Rep: CG7143-PA
- Drosophila melanogaster (Fruit fly)
Length = 885
Score = 68.5 bits (160), Expect = 2e-10
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Frame = +3
Query: 150 SSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNY 314
SS + + ++ + ++ +D+DCF+ QVE ++PE R+ PL + Q N ++ NY
Sbjct: 2 SSARSHVSMQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNY 61
Query: 315 EARNYGVSKCMLVTDALKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEK 476
AR GV++ M +A +CP + L D YR A +V VLQ + +E+
Sbjct: 62 AARAKGVTRHMRGDEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLER 121
Query: 477 LGMDENFIDVTSLVEEKLK 533
+DE ++D+T V +++
Sbjct: 122 ASVDEAYLDITETVNHRMQ 140
Score = 35.9 bits (79), Expect = 0.98
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 615 RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
RL I + +A E+R + E GY AGIAHNK
Sbjct: 204 RLLIGASVAGEVRAAVKKETGYECSAGIAHNK 235
>UniRef50_Q8G430 Cluster: DNA-damage-inducible protein P; n=4;
Bifidobacterium|Rep: DNA-damage-inducible protein P -
Bifidobacterium longum
Length = 448
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVP--LGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
+++HID+D FYA +E+ RNP L+ P +G + +V ++YEAR YG++ M A +
Sbjct: 46 TVLHIDMDAFYASLEVARNPGLKGKPVIIGTGPRAVVSAASYEARKYGINSAMPAARAHR 105
Query: 369 VCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLVEE 524
+CPN + D+ YR S ++ V E++ +DE ++DV++ + E
Sbjct: 106 LCPN-GIFLPVDMAYYRMMSHRIMHEVFLTVTDRFEQVSVDEGYMDVSAALLE 157
>UniRef50_Q2UN38 Cluster: Translesion DNA polymerase - REV1
deoxycytidyl transferase; n=2; Trichocomaceae|Rep:
Translesion DNA polymerase - REV1 deoxycytidyl
transferase - Aspergillus oryzae
Length = 1087
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL----GIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D DCF+A V +RNP P+ G + + + NY AR +GV M + AL
Sbjct: 365 IMHVDFDCFFAAVSTLRNPGYEGKPVAVAHGTGSGSEIASCNYAARAHGVKNGMWMKGAL 424
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTS 512
+ CP+LK++ D +Y AS K + + V+ + +DE IDVT+
Sbjct: 425 QACPDLKVL-PYDFPAYEEASQKFYSAILSLDGIVQSVSIDEALIDVTT 472
>UniRef50_Q67QM6 Cluster: DinP-like DNA-damage-inducible protein;
n=1; Symbiobacterium thermophilum|Rep: DinP-like
DNA-damage-inducible protein - Symbiobacterium
thermophilum
Length = 361
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTDAL 365
+IH+D+D F+A +E NP LR P+ + + +V T +YEAR +GV M +AL
Sbjct: 7 VIHLDMDAFFASIEQRDNPRLRGKPVIVGGSPNSRGVVSTCSYEARRFGVRSAMPSREAL 66
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
++CP + Y +V +++ + +E L +DE F+DV+
Sbjct: 67 RLCPQAVFIRPNHA-KYAAVGRQVRAIMRRFTDVIEPLSIDEAFLDVS 113
>UniRef50_A7BD32 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 447
Score = 62.9 bits (146), Expect(2) = 3e-10
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
I+H+D+D F+AQVEM +P L P+ G + +V ++ YEAR GV M + A
Sbjct: 23 ILHVDMDSFFAQVEMREDPSLVGRPIIVGGTSGRGVVTSATYEARALGVRAGMPTSRARA 82
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+CP + G Y+ S +V +L +E++ +DE F+DV+
Sbjct: 83 LCPGAAFIPGNH-GLYQRYSRQVMAILATVTPVLEQVSIDEAFLDVS 128
Score = 24.6 bits (51), Expect(2) = 3e-10
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 603 GCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
G RL +QIA +R +I + +G GIA K
Sbjct: 129 GARRRLGSPTQIARLIRARIREAVGLPASIGIAATK 164
>UniRef50_A7QW56 Cluster: Chromosome chr3 scaffold_199, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_199, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1130
Score = 67.3 bits (157), Expect = 3e-10
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN------IVVTSNYEARNYGVSKCMLVTD 359
IIH+D+DCF+ V + NPEL+D P+ + N + ++NY AR+YGV + V D
Sbjct: 389 IIHMDMDCFFVSVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRD 448
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A +CP+L ++ + +Y + + + +L V+ + DE F++V ++ K +
Sbjct: 449 AKALCPHL-VIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEV---MDSKEGDP 504
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIA 629
L I+ +++ G L +A
Sbjct: 505 ELLASIIRKEIFETTGCTASAGIAGNLLMA 534
>UniRef50_A1D906 Cluster: DNA-directed polymerase kappa, putative;
n=17; Pezizomycotina|Rep: DNA-directed polymerase kappa,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 614
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/109 (31%), Positives = 58/109 (53%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
++H+D D F+A VE + PEL+ VP+ + K ++ T NYEAR YG M A K+CP
Sbjct: 115 VVHVDCDAFFAAVEELDRPELKTVPMAV-GKGVLTTCNYEARKYGCRSGMASFVAKKLCP 173
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
L + ++ Y + ++ + + E +DE ++++TS E
Sbjct: 174 QL-ICLPQNYEKYTAKAQEIRAIFAQYDPLFESASIDEAYLNITSYCTE 221
>UniRef50_Q8PT42 Cluster: DNA polymerase IV 2; n=4;
Methanomicrobia|Rep: DNA polymerase IV 2 -
Methanosarcina mazei (Methanosarcina frisia)
Length = 369
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL-------GIQQKNIVVTSNYEARNYGVSKCMLVT 356
+ H+D+D F+A VE+ PEL+++P+ G + +V T +YEAR YG+ M ++
Sbjct: 17 VFHVDMDSFFASVEVRERPELKNLPVIVGSDPKGGSGRGVVSTCSYEARKYGIHSAMPIS 76
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKN 536
A + CP+ + ++ Y S V +L+G+ +++ +DE ++ S V +
Sbjct: 77 QAYRFCPDAVFL-PVNMKLYAGVSAGVMEILRGFAEKFQQVSVDEAYLIPGSGV-RNFEE 134
Query: 537 ANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
A L L + ++ + C G K+ S+IA+ +K
Sbjct: 135 AALYALRIKDEVQRQQKITCSVGVGPN-KLVSKIASGFQK 173
>UniRef50_A7D013 Cluster: DNA-directed DNA polymerase; n=1;
Opitutaceae bacterium TAV2|Rep: DNA-directed DNA
polymerase - Opitutaceae bacterium TAV2
Length = 416
Score = 66.9 bits (156), Expect = 5e-10
Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRD--VPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
+I+H+D D F+ VE+ P+ R V +G +++ I+ +++YEAR GV M ALK
Sbjct: 20 NIVHLDADAFFVSVELALQPQYRGKKVAVGGRERGIIASASYEARACGVYTPMPTARALK 79
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL---VEEKLKNA 539
+CP+L L+ + SY S ++F + + V++ +DE ++DVT ++++ A
Sbjct: 80 ICPDLILLPHKG--SYGDVSRRMFDLCENLTPIVQRNSIDEGYLDVTMCGFKTQDEIV-A 136
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ DL +++ + G ++ +QIA+++RK
Sbjct: 137 AIRDL--QNRIWQQLQIPVSMGIATN-RLVAQIASKLRK 172
>UniRef50_Q88V07 Cluster: DNA polymerase IV; n=19;
Lactobacillales|Rep: DNA polymerase IV - Lactobacillus
plantarum
Length = 366
Score = 66.9 bits (156), Expect = 5e-10
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ-------KNIVVTSNYEARNYGVSKCML 350
+ IIH+D+D FYA +E +P + PL I + +V T+NY AR +GV M
Sbjct: 5 RKIIHVDMDAFYASIEEREHPAYKTQPLVIAHDPRQTGGRGVVTTANYVARQFGVHSAMP 64
Query: 351 VTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKL 530
AL++CP + + YR S ++ + + +E + DE ++DVT+ +
Sbjct: 65 AAKALELCPT-AVFKTPNFPLYREVSAQIHRIFHEYTEMIEPIAFDEAYLDVTTNKKHIH 123
Query: 531 KNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
L + +++ + C G K +++A++ RK
Sbjct: 124 SAVELAHRL-QQEIWHQTHLTCSTGISYN-KFIAKLASDYRK 163
>UniRef50_Q8YC76 Cluster: DNA polymerase IV; n=57;
Alphaproteobacteria|Rep: DNA polymerase IV - Brucella
melitensis
Length = 445
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPL--GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
S+ H+D D FYA VE NP+LRD PL G ++ +V T+ Y AR +GV M + AL+
Sbjct: 48 SLAHVDCDAFYASVEKRDNPDLRDKPLIVGGGKRGVVSTACYLARIHGVRSAMPMFKALE 107
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
CP+ ++ ++ Y +V +++ VE + +DE F+D++
Sbjct: 108 ACPDAVVIK-PNMEKYARVGREVRQMMRDLTPLVEPISIDEAFLDLS 153
>UniRef50_A7I5X9 Cluster: DNA-directed DNA polymerase; n=1;
Candidatus Methanoregula boonei 6A8|Rep: DNA-directed
DNA polymerase - Methanoregula boonei (strain 6A8)
Length = 365
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDV-------PLGIQQKNIVVTSNYEARNYGVSKCMLVT 356
++H D+DCFYA VEM +PE+ P G + +V T++YEAR +GV M ++
Sbjct: 13 VLHADMDCFYAAVEMHDHPEIAGKAVVVGADPQGGAGRGVVSTASYEARAFGVRSAMPIS 72
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A ++CP + D+ Y S ++ + + V+++ +DE F+D++
Sbjct: 73 QAYRLCPGAVYLR-PDMARYAAVSAEIMGIFKETGYRVQQVSIDEAFLDIS 122
>UniRef50_A1SQG1 Cluster: DNA-directed DNA polymerase; n=12;
Actinomycetales|Rep: DNA-directed DNA polymerase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 419
Score = 66.1 bits (154), Expect = 8e-10
Identities = 40/107 (37%), Positives = 60/107 (56%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
SI+H DLD F+A VE +P LR P+ I +V+ ++YEA+ +GV M +A + C
Sbjct: 17 SILHADLDSFFASVEQRDDPRLRGRPV-IVGGGVVLAASYEAKAFGVRSAMGGREAARRC 75
Query: 375 PNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
P+ LV +Y AS +VF + + VE + +DE F+DV L
Sbjct: 76 PD-ALVVPPRFSAYVEASKQVFAIFEDTTPLVEGISIDEAFLDVGGL 121
>UniRef50_A1CAF9 Cluster: Sister chromatid cohesion protein (Eso1),
putative; n=7; Trichocomaceae|Rep: Sister chromatid
cohesion protein (Eso1), putative - Aspergillus clavatus
Length = 674
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I HIDLD FYAQ EMVR + R+ PL ++Q + ++ NY AR++G+++ M +A K CP
Sbjct: 46 IAHIDLDAFYAQCEMVRLAKPRETPLAVRQWDSLIAINYPARSFGITRMMSADEARKHCP 105
Query: 378 NLKL 389
+ L
Sbjct: 106 EIVL 109
>UniRef50_A2DLM9 Cluster: ImpB/MucB/SamB family protein; n=1;
Trichomonas vaginalis G3|Rep: ImpB/MucB/SamB family
protein - Trichomonas vaginalis G3
Length = 592
Score = 65.7 bits (153), Expect = 1e-09
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Frame = +3
Query: 33 YFVNLMKENNY*IT*IYKLKKAKLITAFNDTNMDDRNMESSCSTCNEIDGEHFKSIIHID 212
YF K + I ++K T+ ++ + + +E+ ++ ++ K+ +H D
Sbjct: 34 YFEQQQKRSTRADKQILQMKNKLKHTSESERHFAEMQVENYLQNLEKLR-DYSKTYLHAD 92
Query: 213 LDCFYAQVEMVRNPELRDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTDALKVCPNL 383
LD F+A E +R+P L + + ++ T++YEAR +GV M V AL++CP+L
Sbjct: 93 LDSFFASCEALRDPSLVGTAFAVGGEIKHGVLSTTSYEARKFGVRSGMAVFIALQLCPHL 152
Query: 384 KLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDLIVM 563
K+V Y+ S V + + + G+DE +D++ V+ + A +
Sbjct: 153 KIVESH-YELYKHYSSIVRKIFEKYDSHYISFGLDEASLDLSEHVKLDYEKAMDIAKNIQ 211
Query: 564 GQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+++ + CG ++A +IA+++ K
Sbjct: 212 KEVFEQTKLTISCGIAITPQLA-KIASDVNK 241
>UniRef50_Q2S2C0 Cluster: Putative DNA polymerase IV; n=1;
Salinibacter ruber DSM 13855|Rep: Putative DNA
polymerase IV - Salinibacter ruber (strain DSM 13855)
Length = 373
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPE-LRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ I+H+D+D FYAQ+E P+ P+ + + +V T++YEAR YGV +
Sbjct: 19 RRIVHVDMDAFYAQIEQRDFPDRYAGKPIAVGGDPPRGVVQTASYEARPYGVHSAQPAVE 78
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A + CP+L V+ + Y+ S ++ +L+ + VE L +DE ++DVT
Sbjct: 79 ADRKCPDLIFVSPR-MDVYQEESKRIRKILRRYTDLVEPLSLDEAYLDVT 127
>UniRef50_A4INK7 Cluster: DNA polymerase IV; n=1; Geobacillus
thermodenitrificans NG80-2|Rep: DNA polymerase IV -
Geobacillus thermodenitrificans (strain NG80-2)
Length = 409
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEAR-NYGVSKCM 347
H + I H+D + F+A E+ R+P L+ P+ + ++K IV+ ++Y A+ +G+ M
Sbjct: 8 HGRIIFHVDANSFFASCEIARDPSLQKKPVVVAGDPKERKGIVLAASYVAKQQFGIYTTM 67
Query: 348 LVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ +A K CP+L +V D YR S ++F LQ + +E+ +DE ++D+T
Sbjct: 68 PLWEAKKRCPSL-VVRPPDFALYREVSRRLFQCLQRFSPVLERASIDEGYLDMT 120
>UniRef50_A0DAQ7 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 521
Score = 65.3 bits (152), Expect = 1e-09
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 31/201 (15%)
Frame = +3
Query: 201 IHIDLDCFYAQVE--MVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
IHID+D +YAQ E ++ PE D P+ +Q N ++ NY AR+ G+ + ML +A+K+C
Sbjct: 9 IHIDMDAYYAQAEQKLLNIPE--DQPVCARQWNSLIAINYPARDAGIKRGMLSEEAIKLC 66
Query: 375 PNL--------KLVNGE--------------------DLHSYRTASGKVFLVLQGWRCPV 470
PN+ K+++G+ L YR S +F ++ + V
Sbjct: 67 PNVMLPHVETFKVIDGKMVFSTLKDKYIQHNQYEEKVSLRYYRQESKLIFTTIKRFCNCV 126
Query: 471 EKLGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSE-PSAECPCGCHNRLKIASQIANE 647
EK G DE +I V+ E++L++ G L E P + L+ AS +
Sbjct: 127 EKGGTDEGYIQVS---EKELEDIEAQQF--YGHLMKELPEDYQLTEQDHLLRRASLLCQN 181
Query: 648 MRKKIYDELGYTTCAGIAHNK 710
+R IY E Y AGI+ NK
Sbjct: 182 IRDAIYTETKYKCSAGISFNK 202
>UniRef50_Q6C2B9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1219
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQ---KNIVVTS-NYEARNYGVSKCMLVTDAL 365
I+H+D D F+ V + P+L P+ + +N + S NYEAR YGV M ++ AL
Sbjct: 519 IMHLDFDSFFVAVSTLDRPDLTRKPVAVGSGGSRNADIASCNYEARKYGVKNGMWMSRAL 578
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP-VEKLGMDENFIDVTSLVEEKLKNAN 542
K+CP+L+ V+ + Y S + +L+ + + + +DE +D T+L+E +
Sbjct: 579 KLCPDLQTVD-YNFPKYEEVSEAFYTILRESQLDYIRPVSVDEALVDATTLIEANATECS 637
Query: 543 LND 551
L++
Sbjct: 638 LSE 640
>UniRef50_O94623 Cluster: Deoxycytidyl transferase Rev1; n=3;
Schizosaccharomyces pombe|Rep: Deoxycytidyl transferase
Rev1 - Schizosaccharomyces pombe (Fission yeast)
Length = 935
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQ--KNIVVTS-NYEARNYGVSKCMLVTDALK 368
++H+D DCF+A V + ELR P+ + KN + S NYEAR +G+ M V A
Sbjct: 279 LLHVDFDCFFASVSTRFSHELRLKPVAVAHGIKNSEIASCNYEARKFGIKNGMYVGTAKN 338
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVL-QGWRCPVEKLGMDENFIDVTSLV 518
+CP+L++V+ D +Y + S + + +L ++ + +DE +D+TS V
Sbjct: 339 LCPSLRVVD-YDFGAYESVSREFYTILVNTLHDYIKVISIDEALLDITSSV 388
>UniRef50_Q2FKS4 Cluster: DNA-directed DNA polymerase; n=1;
Methanospirillum hungatei JF-1|Rep: DNA-directed DNA
polymerase - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 368
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
I+H+D+D FYA VE+ NP+L P+ I + +V T +YEAR +G+ M ++
Sbjct: 18 ILHLDMDSFYASVEIRNNPDLSGKPVVIGADPMQGTGRGVVSTCSYEARAFGIHSAMPIS 77
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A +CP+ + + +Y S + +L+G +E++ +DE ++D++
Sbjct: 78 QAYHLCPHAIFI-PPHMATYAQVSATIMQILRGIAGEIEQVSIDEAYLDLS 127
>UniRef50_Q2LSC9 Cluster: Nucleotidyltransferase/DNA polymerase
protein; n=2; Syntrophus aciditrophicus SB|Rep:
Nucleotidyltransferase/DNA polymerase protein -
Syntrophus aciditrophicus (strain SB)
Length = 435
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVP-LGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
++I+HID D F+ E +PELR P + ++ IV ++Y A+ GV + + + A K
Sbjct: 13 QAILHIDGDAFFTSCEEAIHPELRGKPIIAGGERGIVACASYAAKKQGVMRGVPLHQARK 72
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
+CP L ++ D +Y S ++F V++ + VE+ +DE F D+T +
Sbjct: 73 MCPGL-VILPSDYETYSLFSRRMFNVMRRFTPQVEEYSIDEAFADITGM 120
>UniRef50_Q1QKL2 Cluster: DNA-directed DNA polymerase; n=6;
Alphaproteobacteria|Rep: DNA-directed DNA polymerase -
Nitrobacter hamburgensis (strain X14 / DSM 10229)
Length = 429
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVP--LGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
++ HID D FYA VE NP L D P +G ++ +V + Y AR YGV M + AL
Sbjct: 45 TLAHIDCDAFYATVEKRDNPALADKPVIIGGGRRGVVSAACYIARTYGVHSAMPMFKALA 104
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
+CP+ ++ D+ Y +V +Q VE L +DE F+D+
Sbjct: 105 LCPSAAVI-APDMTKYVRVGREVRHAMQALTPLVEPLSIDEAFLDL 149
>UniRef50_Q9HQT4 Cluster: DNA polymerase IV; n=5;
Halobacteriaceae|Rep: DNA polymerase IV - Halobacterium
salinarium (Halobacterium halobium)
Length = 411
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 16/120 (13%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
++H+D+DCFYA E R P LR P+ + Q V T++YEAR YGV ++
Sbjct: 18 VVHVDMDCFYASCERRREPALRGAPVVVGMGYEPDQTVGAVATASYEAREYGVESAQAIS 77
Query: 357 DALKVCPN---------LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
AL+ P D+ Y + S V +L G PV ++ +DE ++DVT
Sbjct: 78 AALERLPRKADAPDASAAGYYRPVDMAYYESVSESVSEILHGLGDPVREVSIDEAYLDVT 137
>UniRef50_P63988 Cluster: DNA polymerase IV 2; n=16;
Corynebacterineae|Rep: DNA polymerase IV 2 -
Mycobacterium bovis
Length = 346
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
I+H+DLD F A VE++R+PEL +P+ + + + +V ++YEAR YGV M +
Sbjct: 9 ILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLR 68
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
A + CP + +Y AS +V +L+ PVE G DE ++ V
Sbjct: 69 TAARRCPEATFLPSNPA-AYNAASEEVVALLRDLGYPVEVWGWDEAYLAV 117
>UniRef50_A6C5Y5 Cluster: UMUC-like DNA-repair protein; n=1;
Planctomyces maris DSM 8797|Rep: UMUC-like DNA-repair
protein - Planctomyces maris DSM 8797
Length = 405
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 204 HIDLDCFYAQVEMVRNPELRDVPLGI--QQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
HID DCFY E +R+ LR VP G+ Q V+ +YE + YGV + +A K+CP
Sbjct: 8 HIDSDCFYVSCERIRSYSLRGVPCGVLGNQGACVIAKSYELKAYGVKTGHPIWEAKKLCP 67
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
+ V D Y S ++ +L+ VE +DE F D + L
Sbjct: 68 HAVFVK-RDFRWYEVISRRLLDLLKTVSPLVEYYSIDEMFFDASEL 112
>UniRef50_Q5KGG8 Cluster: Eta DNA polymerase, putative; n=2;
Filobasidiella neoformans|Rep: Eta DNA polymerase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 690
Score = 63.7 bits (148), Expect = 4e-09
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKV 371
++I H D+D YAQ E VR D+PL Q ++ NY AR YG+ + + DA K+
Sbjct: 35 RTIAHCDIDAAYAQFEQVRLGLPDDIPLICAQWQSIIAVNYPARKYGIKRFTSIEDAKKM 94
Query: 372 CPNLKLV------NGE----------------DLHSYRTASGKVFLVLQGW--RCPVEKL 479
CP+L++ NGE L YR S K+ + + R +EK
Sbjct: 95 CPHLRIQHVATYRNGESEAGYWDDVDPRTHKVSLDVYRRESLKILAIFKEKIPRGEIEKA 154
Query: 480 GMDENFIDVTSLVEEKLKNAN 542
+DE F+D+T +V E+L A+
Sbjct: 155 SIDEAFLDLTPMVIERLLAAH 175
>UniRef50_Q2SS65 Cluster: ImpB/MucB/SamB family protein; n=2;
Mycoplasma|Rep: ImpB/MucB/SamB family protein -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 408
Score = 63.3 bits (147), Expect = 6e-09
Identities = 33/113 (29%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTDA 362
K+IIHID+D F+A +++PEL++ P+ I K+I+ ++YEAR Y + M + A
Sbjct: 4 KTIIHIDMDAFFASCMQLKHPELKNKPIVISNSFDKSIISAASYEARKYNIKAAMPLFKA 63
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLV 518
K+ P + + D++ S +++ + + +E +DE ++DV+ L+
Sbjct: 64 KKLYPKIISIRA-DMNFISNISSQIWEFIKTNYTNKIEIASIDEAYLDVSDLI 115
>UniRef50_Q2RNH1 Cluster: DNA-directed DNA polymerase; n=1;
Rhodospirillum rubrum ATCC 11170|Rep: DNA-directed DNA
polymerase - Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255)
Length = 421
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQ---KNIVVTSNYEARNYGVSKCMLVTDALK 368
I HID D FYA VE NP LRD PL + + + T+ Y AR +G M + L+
Sbjct: 38 IAHIDCDAFYASVEKRDNPSLRDRPLIVGHPGGRGVATTACYIARRFGARSAMPMFKCLE 97
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+CP +V D+ Y+ S +V ++ +E L +DE ++D++
Sbjct: 98 LCPE-AVVIPPDMAKYKAVSAQVRAIMLEATHRLEPLSLDEAYLDLS 143
>UniRef50_A3EWL3 Cluster: Polymerase ATREV1-1105; n=8; Arabidopsis
thaliana|Rep: Polymerase ATREV1-1105 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1105
Score = 63.3 bits (147), Expect = 6e-09
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN------IVVTSNYEARNYGVSKCMLVT 356
+IIHIDLDCF+ V + EL D P+ + + + ++NY AR YGV M V
Sbjct: 374 TIIHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVR 433
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
A +CP L +V + +Y + + + +L V+ L DE F+DV+ L
Sbjct: 434 HAKDLCPQLVIV-PYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDL 485
>UniRef50_Q5BYF2 Cluster: SJCHGC07422 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07422 protein - Schistosoma
japonicum (Blood fluke)
Length = 179
Score = 63.3 bits (147), Expect = 6e-09
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 KKAKLITAFNDTNMDDRNMESSCSTCNEIDGEHF-KSIIHIDLDCFYAQVEMVRNPELRD 266
+K K+I + + + +E+ N F +SI+H+D+D FYA VE+ PELR
Sbjct: 76 QKLKIIKSLTPAMLQNGEVEADNILKNLKPKRCFSRSIVHVDMDAFYAAVEIRDQPELRH 135
Query: 267 VPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLV 392
P+ + +++ TSNY AR +GV + K+CP LK++
Sbjct: 136 HPVAVGSNSMLSTSNYIARRFGVRAGLPGFLGKKLCPQLKII 177
>UniRef50_Q09615 Cluster: Putative uncharacterized protein rev-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rev-1 - Caenorhabditis elegans
Length = 1027
Score = 63.3 bits (147), Expect = 6e-09
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Frame = +3
Query: 99 KLITAFNDTNMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLG 278
KL + +++ + S NEI E ++ H+DLDCF+ V + +L+ +
Sbjct: 409 KLEGKLTEKCFEEKELIDMKSLSNEISRE--STVFHVDLDCFFVSVAVRNRIDLKHKEVA 466
Query: 279 IQQK--------NIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGK 434
I + V + +Y AR+ GV MLV DAL+ CP L L+ + Y S K
Sbjct: 467 ITHSKGTISNSMSEVASCSYAARDCGVKNGMLVRDALQKCPQLTLLPYQ-FEDYVQVSRK 525
Query: 435 VFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
++ +L + V + DE +I+++S E+
Sbjct: 526 IYEILASYTLEVRAVSCDEMYINMSSFCEK 555
>UniRef50_A7DSF9 Cluster: DNA-directed DNA polymerase; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
DNA-directed DNA polymerase - Candidatus Nitrosopumilus
maritimus SCM1
Length = 364
Score = 62.9 bits (146), Expect = 7e-09
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
+ HID D FYAQ E +R+PEL+ P+ + + T+NY AR YG + +
Sbjct: 6 VFHIDFDYFYAQCEEIRSPELKSKPVCVCVFSDRGGDSGAIATANYTARKYGAKSGIPIV 65
Query: 357 DALKVCPNLK--LVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKL 530
A K K + D Y S K +++ + E +G DE ++DVT E
Sbjct: 66 FAKKRLEERKDAVFLPVDFDYYSEMSEKAMKIMEEFSDVFEYVGRDEAYLDVTKRTEGDF 125
Query: 531 KNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
A+ + + + C G K+ S+IA++ +K
Sbjct: 126 HKASHLAQQIKNSIREKTKLSCSIGISPN-KLISKIASDFQK 166
>UniRef50_UPI000050FCD1 Cluster: COG0389: Nucleotidyltransferase/DNA
polymerase involved in DNA repair; n=1; Brevibacterium
linens BL2|Rep: COG0389: Nucleotidyltransferase/DNA
polymerase involved in DNA repair - Brevibacterium
linens BL2
Length = 419
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
+++H+D+D F+ VE++ PEL P+ G + +VV+++YEAR +GV M + A+
Sbjct: 24 TMLHLDMDSFFVSVELLSRPELVGRPVIVGGRSGRGVVVSASYEAREFGVHAAMPMGRAM 83
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
+CP +++ Y + S KVF ++ +++ +DE +IDV++ V
Sbjct: 84 NLCPFAEVIPPSH-GLYSSYSQKVFDLVAQVTPDFQQVSVDEAYIDVSAAV 133
>UniRef50_Q9AK82 Cluster: DNA polymerase IV; n=8;
Actinomycetales|Rep: DNA polymerase IV - Streptomyces
coelicolor
Length = 479
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRD---VPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
+I+H+D+D F+A VE P LR V G+ + +V T +YEAR +GV M + A
Sbjct: 6 TILHLDMDAFFASVEQASKPSLRGKAVVVGGLGPRGVVATCSYEARVFGVHSAMPMGQAR 65
Query: 366 KVCPNLK-LVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
++ P+ LV +L YR+ S +V +L+ VE L +DE F+D+
Sbjct: 66 RLAPHAAYLVPRFEL--YRSISEQVMRLLRELSPLVEPLSLDEAFVDL 111
>UniRef50_A1SN18 Cluster: DNA-directed DNA polymerase; n=6;
Actinomycetales|Rep: DNA-directed DNA polymerase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 362
Score = 62.1 bits (144), Expect = 1e-08
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI------QQKNIVVTSNYEARNYGVSKCMLVTD 359
++H+DLD F A VE++R PEL P+ + ++ +V T++YEAR +GV M +
Sbjct: 10 VLHVDLDQFIAAVEVLRRPELAGRPVVVGGRGDPTERGVVATASYEARAFGVGSGMPLRV 69
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQG--W-RCPV--EKLGMDENFIDVTSLVEE 524
A + CP+ + D +Y AS +V L+G W PV E LG DE F+
Sbjct: 70 AARKCPDAVFL-PVDKEAYDAASAQVMTTLRGLEWGGVPVVLEVLGWDEAFL-AAGEDHG 127
Query: 525 KLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+L N + ++ +E C G + K+ ++IA + K
Sbjct: 128 ELGNPREFAEHLRAEVLAETRLHCSVGIGDN-KLRAKIATDFGK 170
>UniRef50_Q7R5M9 Cluster: GLP_487_58318_60345; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_487_58318_60345 - Giardia lamblia
ATCC 50803
Length = 675
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/106 (33%), Positives = 53/106 (50%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLK 386
+D DCFYA +E NP LR P+ I +IV TSNY AR YGV M A +C ++
Sbjct: 93 LDFDCFYASIEERDNPSLRGKPVIITGGSIVCTSNYAARKYGVRSAMPTHVAKALCKDVI 152
Query: 387 LVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
+ + Y + S V G+ G+DE ++T+ +++
Sbjct: 153 AIPA-SMEKYMSVSHAAAEVFAGYDTHYSMHGLDECVFNLTAYMKQ 197
>UniRef50_Q75EE5 Cluster: AAR136Wp; n=1; Eremothecium gossypii|Rep:
AAR136Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 617
Score = 53.2 bits (122), Expect(2) = 1e-08
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
+ HID++ F+AQVE VR +D P+ Q + V+ +Y R YG+++ V +A+K CP
Sbjct: 26 VAHIDVNAFFAQVEQVRCGYGKDDPVVCVQWSSVIAVSYACRKYGITRLDSVAEAMKKCP 85
Query: 378 NLKLVN------GEDLHSYRTASG 431
L ++ GED Y G
Sbjct: 86 TLIPIHTAVFKKGEDFWQYHDGYG 109
Score = 28.7 bits (61), Expect(2) = 1e-08
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 405 LHSYRTASGKVFLVLQGWRCP-VEKLGMDENFIDV 506
L YR S K+ ++Q RCP VEK +DE F+D+
Sbjct: 128 LDPYRRESRKLLKMIQK-RCPIVEKASIDEVFVDL 161
>UniRef50_A0Y5N4 Cluster: DNA polymerase IV, devoid of proofreading,
damage-inducible protein P; n=1; Alteromonadales
bacterium TW-7|Rep: DNA polymerase IV, devoid of
proofreading, damage-inducible protein P -
Alteromonadales bacterium TW-7
Length = 333
Score = 56.4 bits (130), Expect(2) = 1e-08
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +3
Query: 249 NPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYR 419
NP+L +VPL I ++ ++ T+NY AR +GV M A ++CP+L +V G + Y+
Sbjct: 4 NPKLANVPLAIGGNSRRGVLSTANYIAREFGVRSAMSNYHAKQLCPDLVIVPGR-MAVYK 62
Query: 420 TASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
S ++ V + VE L +DE ++DVT
Sbjct: 63 EISSQIREVFSRYTHLVEPLSLDEAYLDVT 92
Score = 25.4 bits (53), Expect(2) = 1e-08
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 627 ASQIANEMRKKIYDELGYTTCAGIA 701
A+ IA ++R IY+ G T AG+A
Sbjct: 101 ATLIAQQIRADIYNATGLTASAGVA 125
>UniRef50_UPI000023E7DE Cluster: hypothetical protein FG01035.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01035.1 - Gibberella zeae PH-1
Length = 1143
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL----GIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
++H+D D F+ V + + PEL + P I + + + NY AR +GV M + AL
Sbjct: 361 VMHVDFDSFFCAVSIKKKPELINKPAVVAHSIGSGSEIASCNYPAREFGVKNGMWMKSAL 420
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
++CP+LK++ D +Y AS + + V+ + +DE ID+TS+V
Sbjct: 421 ELCPDLKVL-PYDFPAYEKASRLFYESMLDIGGVVQSVSIDEALIDITSVV 470
>UniRef50_Q8F8Q2 Cluster: DNA polymerase IV; n=6; Bacteria|Rep: DNA
polymerase IV - Leptospira interrogans
Length = 364
Score = 61.7 bits (143), Expect = 2e-08
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTD 359
+ IIH+D+D FYA VE PE + PL + +++V ++YEAR +GV M +
Sbjct: 6 RKIIHVDMDAFYASVEQRDFPEYKGKPLIVGGPPNSRSVVSAASYEARKFGVRSAMPCSK 65
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
A ++ P V Y+ S ++ + + VE L +DE ++DVT ++ + A
Sbjct: 66 AAQLAPQAIFVFPR-FEVYKEVSKQIREIFLEYTDLVEMLSLDEGYLDVT-FNKKNIPYA 123
Query: 540 NLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ +++ G N K S++A+E K
Sbjct: 124 VTIAKEIRTEIFKRTELTASAGVGNS-KFISKLASEKNK 161
>UniRef50_P96022 Cluster: DNA polymerase IV; n=9; Sulfolobaceae|Rep:
DNA polymerase IV - Sulfolobus solfataricus
Length = 354
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
+I +D D F+AQVE V NP+ + PL + + V T+NYEAR GV M +
Sbjct: 3 VIFVDFDYFFAQVEEVLNPQYKGKPLVVCVYSGRTKTSGAVATANYEARKLGVKAGMPII 62
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKN 536
A+++ P+ V Y S ++ +L +E +DE ++DVT+ VE +N
Sbjct: 63 KAMQIAPSAIYVPMRK-PIYEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFEN 121
>UniRef50_A7E7M1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1255
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN----IVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D D F+ V + PE D P + N + + NY AR +GV M + +A+
Sbjct: 437 IMHVDFDSFFCAVSLKSAPEYFDKPAVVAHGNGTGSEIASCNYPARVFGVKNGMWMKNAI 496
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
K+CP++K++ D +Y AS + + + + +DE F+D+TSL
Sbjct: 497 KLCPDIKVL-PYDFPAYEEASKAFYEAILDVGGIFQSVSVDEAFVDITSL 545
>UniRef50_Q0EYF1 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 410
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN--IVVTSNYEARNYGVSKCMLVTDALK 368
+I H+D D FYA E R+P+LR P+ + + +V+ +Y+AR G+ V +A +
Sbjct: 9 AIAHVDCDAFYASCEAARHPKLRGRPICVLSNHNAMVIAKSYDARALGIRTGTPVWEARR 68
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
+ P+ + D Y S ++F +L+ + VE +DE FID +
Sbjct: 69 MAPHAAFLT-PDFRYYGQISQQMFSILRRYSPVVEVYSIDEGFIDFNGI 116
>UniRef50_Q010L0 Cluster: Translesion DNA polymerase-REV1
deoxycytidyl transferase; n=2; Ostreococcus|Rep:
Translesion DNA polymerase-REV1 deoxycytidyl transferase
- Ostreococcus tauri
Length = 878
Score = 60.1 bits (139), Expect = 5e-08
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Frame = +3
Query: 129 MDDRNMESSCSTCNEIDGE--HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI------Q 284
+D + ++S S N + + H I+H+D+DCF+A V + ELR P+ +
Sbjct: 29 LDAKTSDASASAKNLLKKKPNHPPVIMHVDMDCFFASVATRNDEELRSKPVAVTWGTTKS 88
Query: 285 QKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRC 464
Q+ + + NY AR +GV M + +AL+ CP L + D +Y + +V+ +L W
Sbjct: 89 QRGEISSCNYRARAFGVRAGMWLDEALRACPTL-VTLPYDFSAYEATALEVYEIL--WAI 145
Query: 465 ---PVEKLGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGC 608
V + DE ++D + E+ + L V ++ + A C C
Sbjct: 146 SGGEVVGVSCDEAYVDAS----ERSAREGKDPLEVAEEIRRQVRARTGCSC 192
>UniRef50_A4RF27 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1201
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN----IVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D D F+ V + PE D P + N + + NY AR +GV M + AL
Sbjct: 386 IMHVDFDSFFCAVSLKTAPEYIDKPAVVAHGNGTGSEIASCNYPAREFGVKNGMWMKRAL 445
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
++CP +K++ D +Y AS + + V+ + +DE ID+T+LV E
Sbjct: 446 ELCPTIKVL-PYDFPAYEDASRLFYGAILEIGGIVQSVSVDEALIDITTLVLE 497
>UniRef50_Q0AWD6 Cluster: DNA-directed DNA polymerase; n=7;
Clostridiales|Rep: DNA-directed DNA polymerase -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 419
Score = 52.4 bits (120), Expect(2) = 7e-08
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVTDA 362
I+H DL+ FYA VE + PE+R+ + + + IV+ NY A+ G+ ++ A
Sbjct: 5 ILHSDLNNFYASVECLHRPEIRNKAVAVCGDPAARHGIVLAKNYLAKESGIQTGEVIWQA 64
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
+ CP L +V + Y S + + VE G+DE ++DVT +
Sbjct: 65 QQKCPELVVV-PPNYPLYLKFSRLARSIYASYTDQVEAFGLDEAWLDVTGSI 115
Score = 27.1 bits (57), Expect(2) = 7e-08
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 633 QIANEMRKKIYDELGYTTCAGIAHNK 710
++A+E+R++I ELG + G+++NK
Sbjct: 123 EMADEIRERIKLELGVSASVGVSYNK 148
>UniRef50_A6GT02 Cluster: UMUC-like DNA-repair protein; n=1;
Limnobacter sp. MED105|Rep: UMUC-like DNA-repair protein
- Limnobacter sp. MED105
Length = 397
Score = 59.3 bits (137), Expect = 9e-08
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 20/124 (16%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-----------QQ---------KNIVVTSNYE 317
I H+D+D FYA E+VRNP LR +P+ + QQ + ++ T+NYE
Sbjct: 13 IAHLDMDAFYANAELVRNPALRGLPVAVGGRRGMQPLPGQQFPTLAQYEGRGVLTTANYE 72
Query: 318 ARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENF 497
AR G+ M A K+ P+ L+ D Y+T S + ++ VE G+DE +
Sbjct: 73 ARALGLHSAMPTMKAAKLAPHAVLLPA-DFDWYKTLSRQFKTAVRELAPNVEDRGIDEIY 131
Query: 498 IDVT 509
ID+T
Sbjct: 132 IDLT 135
>UniRef50_Q0UFK5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1197
Score = 59.3 bits (137), Expect = 9e-08
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL----GIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
I+H+D D F+A V + ++P+ +D P G + + + NY AR +GV M + A
Sbjct: 398 ILHVDFDSFFAAVSLKKHPQYKDKPAVVAHGQGSGSEIASCNYPARKFGVKNGMWMKKAQ 457
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
++CP++K++ D +Y AS + + V+ + +DE +DV+++
Sbjct: 458 ELCPDIKIL-PYDFPAYEEASRAFYDAILSTGGLVQSVSIDEALVDVSNM 506
>UniRef50_Q0BVN8 Cluster: DNA polymerase IV; n=3;
Alphaproteobacteria|Rep: DNA polymerase IV -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 427
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPEL--RDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTD 359
H ++ H+D D FYA VE PEL + V +G ++ +V + Y AR GV M +
Sbjct: 35 HQLTVAHVDCDAFYASVEKHDRPELAAKPVLVGGGKRGVVAAACYIARMQGVRSAMPMFQ 94
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
ALK CP+ +V D YR A+ ++ ++ V+ L +DE +D++
Sbjct: 95 ALKACPD-AVVLPPDFPKYRAAAHRIREMMLALTPLVQPLSIDEAALDLS 143
>UniRef50_Q6CDC9 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 640
Score = 58.8 bits (136), Expect = 1e-07
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I+H+D+D F+AQVE VR P+ +Q + ++ Y AR G+++ M +A K+CP
Sbjct: 26 IVHLDMDAFFAQVEQVRLGLPPGTPVACRQWDGLIAVGYAARASGITRHMRAPEAQKLCP 85
Query: 378 NLKLVN------GED----------------LHSYRTASGKVFLVLQGWRCPVEKLGMDE 491
NL + + GED L YR A KV +++ + VEK +DE
Sbjct: 86 NLVMAHAASFKRGEDMWEYHANPSADDYKISLDPYRQAGKKVLNIVKQYSSVVEKASVDE 145
Query: 492 NFIDV 506
+++D+
Sbjct: 146 SYLDL 150
>UniRef50_Q0U034 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 720
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I H+DLD FYAQ E VR +PL +QQ ++ NY AR +G+S+ + ++ALK CP
Sbjct: 46 IAHVDLDAFYAQCETVRLGLDPSLPLAVQQWQGLIAINYPARAFGLSRHVTSSEALKQCP 105
Query: 378 NLKL 389
+L L
Sbjct: 106 DLIL 109
Score = 35.9 bits (79), Expect = 0.98
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 624 IASQIANEMRKKIYDELGYTTCAGIAHNK 710
IAS+I ++RK I ++LGYT G+A NK
Sbjct: 241 IASEIVRDVRKNIKEKLGYTCSGGVAKNK 269
>UniRef50_A6Q1N4 Cluster: DNA polymerase IV; n=1; Nitratiruptor sp.
SB155-2|Rep: DNA polymerase IV - Nitratiruptor sp.
(strain SB155-2)
Length = 418
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/92 (34%), Positives = 54/92 (58%)
Frame = +3
Query: 288 KNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP 467
+ I++TS+YEAR YGV M V +AL++CP+LK+V L+ Y S + +LQ
Sbjct: 79 RGIIITSSYEARRYGVKTGMSVKEALQLCPHLKVVPPNHLY-YHKLSKALHNLLQKEIPV 137
Query: 468 VEKLGMDENFIDVTSLVEEKLKNANLNDLIVM 563
VE+ +DE F D+ +E++ ++ L ++
Sbjct: 138 VEQFSIDEFFGDLDGYIEDEYTETFIHHLQIL 169
Score = 33.9 bits (74), Expect = 4.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGI 281
IHID+D F+ E ++ P LR++P +
Sbjct: 3 IHIDIDAFFISAERLKKPSLRNIPAAV 29
>UniRef50_Q015N2 Cluster: DNA-directed polymerase kappa; AtPOLK;
n=2; Ostreococcus|Rep: DNA-directed polymerase kappa;
AtPOLK - Ostreococcus tauri
Length = 605
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQ--QKNIVVTSNYEARNYGVSKCMLVTDALKVCPN 380
+D+D FYA E + NPEL+ VP+ + ++ T+NY AR +GV M A K+CP
Sbjct: 168 VDMDGFYAACEELANPELKKVPVAVAAGPSCVLTTANYVARKFGVRAAMPGFIAKKLCPE 227
Query: 381 LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
L V D Y AS + V + +DE +I+VT +E
Sbjct: 228 LVFVK-PDFTKYVKASKESRSVFAQYNPDYIAGSLDEAYIEVTEYCKE 274
>UniRef50_Q59Q77 Cluster: Putative uncharacterized protein REV1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein REV1 - Candida albicans (Yeast)
Length = 1113
Score = 58.4 bits (135), Expect = 2e-07
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Frame = +3
Query: 174 IDGEHFKSIIHIDLDCFYAQVEMVRNPELRDV--PLGIQ---QKNIVVTSNYEARNYGVS 338
ID K I+HID DCF+A ++ P+L P+ + + + + + NY AR YGV
Sbjct: 384 IDPGEKKVIMHIDFDCFFATASCLKRPDLDSSKHPIAVSHGGKTSDIASCNYVARKYGVK 443
Query: 339 KCMLVTDALKVCPNLKLVNGEDLHSYRTASGKV--FLVLQGWRCPVEKLGMDENFIDVTS 512
M + A K+CP+L L+ E SY S + +L+ + + + +DE +D TS
Sbjct: 444 NGMWLMQATKLCPDLILLPYE-FESYEKFSSEFYNYLLTSKFFDSIFPVSIDEVLVDATS 502
>UniRef50_Q04049 Cluster: DNA polymerase eta; n=4;
Saccharomycetales|Rep: DNA polymerase eta -
Saccharomyces cerevisiae (Baker's yeast)
Length = 632
Score = 56.0 bits (129), Expect(2) = 2e-07
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I HID++ F+AQVE +R ++ P+ Q N ++ +Y AR YG+S+ + +ALK C
Sbjct: 26 IAHIDMNAFFAQVEQMRCGLSKEDPVVCVQWNSIIAVSYAARKYGISRMDTIQEALKKCS 85
Query: 378 NLKLVN------GEDLHSYRTASG 431
NL ++ GED Y G
Sbjct: 86 NLIPIHTAVFKKGEDFWQYHDGCG 109
Score = 21.8 bits (44), Expect(2) = 2e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 405 LHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
L YR S K + + VE+ +DE F+D+
Sbjct: 128 LEPYRRESRKALKIFKSACDLVERASIDEVFLDL 161
>UniRef50_Q4QCF2 Cluster: DNA polymerase eta, putative; n=3;
Leishmania|Rep: DNA polymerase eta, putative -
Leishmania major
Length = 760
Score = 58.0 bits (134), Expect = 2e-07
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVR-NPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
+ I H+D+DCFYAQVE VR + R PL + Q ++ NY AR GV + V++A
Sbjct: 15 RCIAHMDMDCFYAQVEAVRLGVDCRVTPLVLSQWGSLIAVNYPARARGVRRFSNVSEAQA 74
Query: 369 VCPNLKLV------NGE----------------DLHSYRTASGKVFLVLQGW-RCPVEKL 479
+CP L + GE L YR AS ++F +L VEK
Sbjct: 75 LCPGLIVALSPSYRMGEAVSQYHPHPVQDSYKLSLEPYRHASRQIFSILAATPGVQVEKG 134
Query: 480 GMDENFIDVTSLVEEKL 530
+DE ++DVT +L
Sbjct: 135 SVDEAYVDVTEAARREL 151
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 627 ASQIANEMRKKIYDELGYTTCAGIAHNK 710
AS++ + +R++IY EL Y AGIAHN+
Sbjct: 240 ASRVVHRLRQRIYAELHYDCSAGIAHNR 267
>UniRef50_A7D0X1 Cluster: DNA-directed DNA polymerase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: DNA-directed
DNA polymerase - Halorubrum lacusprofundi ATCC 49239
Length = 476
Score = 58.0 bits (134), Expect = 2e-07
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
+ H+D+DCFYA E +R PEL D PL + + V T++YEAR +GV M ++
Sbjct: 21 VFHVDMDCFYASCERLRRPELADEPLVVGMGYEAGEAIGAVATASYEARAFGVESAMPIS 80
Query: 357 DALKVCPNLKLVNGE------------------DLHSYRTASGKVFLVLQGWRCPVEKLG 482
+AL + P + VN + DL Y+ + V VL+ + ++
Sbjct: 81 EALDLLP--RRVNADPDDPDAPDPDEAGRYLPVDLDFYKEVASDVKTVLRDCADVLREVS 138
Query: 483 MDENFIDVT 509
+DE ++DVT
Sbjct: 139 VDEAYLDVT 147
>UniRef50_A6DEG1 Cluster: DNA-directed DNA polymerase; n=1;
Caminibacter mediatlanticus TB-2|Rep: DNA-directed DNA
polymerase - Caminibacter mediatlanticus TB-2
Length = 404
Score = 55.2 bits (127), Expect(2) = 3e-07
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +3
Query: 282 QQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWR 461
+ + I+VT++YEAR +G+ M + +A K+ PNL ++ D H Y S K+ L L+
Sbjct: 66 ENRGIIVTASYEAREFGIKTGMTLLEAKKIYPNLTVIK-PDYHLYHLLSYKLKLFLRKKI 124
Query: 462 CPVEKLGMDENFIDVTSLVEEK 527
+E+ +DE F D+ V+EK
Sbjct: 125 PLIEQFSIDEFFGDLEGWVDEK 146
Score = 22.2 bits (45), Expect(2) = 3e-07
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVP 272
IH+DLD F+ ++ L P
Sbjct: 3 IHLDLDAFFVSAHRTKDKSLIGKP 26
>UniRef50_A3TNV0 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 347
Score = 57.6 bits (133), Expect = 3e-07
Identities = 44/153 (28%), Positives = 74/153 (48%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
+IH D D F+A VE +P LR P+ + +V ++YEAR GV M + A++ P
Sbjct: 9 LIHADADAFFASVEQRDHPHLRGRPM-VVGPQVVACASYEARALGVHAGMPLFQAVRRWP 67
Query: 378 NLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDLI 557
L LV +Y +AS + + + VE M+E F+DV++L ++ A
Sbjct: 68 EL-LVAPFRAQAYESASADLMALFRELTPLVEPGSMEEAFLDVSALDGGSVEEAGRLAGE 126
Query: 558 VMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
+ + + E CG R K+ +++A+ K
Sbjct: 127 LRARAHRELGLPVSCGV-ARAKLFAKLASRRAK 158
>UniRef50_A0RN38 Cluster: DNA polymerase IV 1, putative; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: DNA
polymerase IV 1, putative - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 380
Score = 57.6 bits (133), Expect = 3e-07
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGIQ------------QKNIVVTSNYEARNYGVSKC 344
+HIDLDCF+ NP+L + + + I+V+++YEAR G+
Sbjct: 3 LHIDLDCFFVSASRTVNPDLNGKVVAVAGGNKTDIFGDFIESGIIVSASYEARRLGIGCT 62
Query: 345 MLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
M + A K+ PN+ ++ + + Y+T S +F +L + +EK +DE F+ +L
Sbjct: 63 MHSSIARKIYPNI-IILPTNFNLYKTLSNNLFKLLLDYTDEIEKYSIDEFFL---NLKGT 118
Query: 525 KLKNANLN-DLIVMGQLYSEPSAECPCGCHNR---LKIASQIANEMRKKIYDEL 674
K +N LN I+ ++ +E G K A+ +A + KI +++
Sbjct: 119 KFENDPLNFAKILQNRIKNELKLPSSIGISETKFIAKFATNLAKPSKIKIINDI 172
>UniRef50_A6GF38 Cluster: DNA-directed DNA polymerase; n=1;
Plesiocystis pacifica SIR-1|Rep: DNA-directed DNA
polymerase - Plesiocystis pacifica SIR-1
Length = 409
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = +3
Query: 213 LDCFYAQVEMVRNPELRDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTDALKVCPNL 383
+D F+A +E +P LR P+ + ++ +V ++YEAR +G + A + CP
Sbjct: 1 MDAFFASIEQRDDPRLRGKPVLVGHAGKRGVVAAASYEARRFGCHSAQPMAVARRRCPQA 60
Query: 384 KLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+V G Y S ++F +L+G+ VE L +DE F+D++
Sbjct: 61 VIVPGRH-EVYLGVSAELFEILEGFTPVVEGLSIDEAFLDMS 101
>UniRef50_A5E4H3 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1301
Score = 57.2 bits (132), Expect = 4e-07
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Frame = +3
Query: 126 NMDDRNMESSCSTC--NEIDGEHFKSIIHIDLDCFYAQVEMVRNPEL---RDVPLGI--- 281
N DR SS + N D + + I+HID DCF+A +++P L RD P+ +
Sbjct: 511 NPQDRFAASSINNLVQNNNDNKGKRIIMHIDFDCFFATASCLKHPNLDIDRD-PIAVGHG 569
Query: 282 QQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGE-DLHSYRTASGKVFLVLQGW 458
+ + V + NY AR YGV M A +CPNL L++ E +++ ++ +LV +
Sbjct: 570 GETSDVASCNYVARKYGVRNGMWFRLAQALCPNLTLLDYEFEIYEKCSSEFYNYLVTSDY 629
Query: 459 RCPVEKLGMDENFIDVTS 512
+ + +DE +D +S
Sbjct: 630 FDTIFPVSIDEVLVDASS 647
>UniRef50_P63986 Cluster: DNA polymerase IV 1; n=26;
Actinomycetales|Rep: DNA polymerase IV 1 - Mycobacterium
bovis
Length = 468
Score = 57.2 bits (132), Expect = 4e-07
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
++H+D+D F+A VE + P LR P+ G+ + +V ++YEAR YG M + A +
Sbjct: 6 VLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 65
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
+ +V Y AS +VF ++G VE+L DE F + L
Sbjct: 66 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQL 114
>UniRef50_Q126E6 Cluster: DNA-directed DNA polymerase; n=21;
Betaproteobacteria|Rep: DNA-directed DNA polymerase -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 40.7 bits (91), Expect(2) = 5e-07
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 288 KNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP 467
+ ++ T+ Y AR +GV M + A K+CP +V D R S ++F P
Sbjct: 79 RGVITTATYAARQFGVGSAMGMMKAAKLCPQ-AIVLPVDFEEVRKYS-RLFKSTITEIAP 136
Query: 468 V-EKLGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIAN 644
V + G+DE +ID T + + + + ++ ++ + C G K+ +++A+
Sbjct: 137 VMQDRGVDEVYIDFTDVPGGQREGGRVLARLIQKAIFEKTGLTCSVGVAPN-KLLAKMAS 195
Query: 645 EMRK 656
E K
Sbjct: 196 EFDK 199
Score = 35.9 bits (79), Expect(2) = 5e-07
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI 281
+ I H+D+D F+A +E++R P+L+ +P+ I
Sbjct: 13 RRIAHLDMDAFFASIELLRYPQLKGLPVVI 42
>UniRef50_O42917 Cluster: N-acetyltransferase eso1; n=1;
Schizosaccharomyces pombe|Rep: N-acetyltransferase eso1
- Schizosaccharomyces pombe (Fission yeast)
Length = 872
Score = 56.4 bits (130), Expect = 7e-07
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 22/130 (16%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
+ HID D FYAQVE VR VPL +QQ ++ NY AR +S+ VT+A K CP
Sbjct: 29 VAHIDQDAFYAQVESVRLGLDHSVPLAVQQWQGLIAVNYAARAANISRHETVTEAKKKCP 88
Query: 378 NLKLVN------GED----------------LHSYRTASGKVFLVLQGWRCPVEKLGMDE 491
L + GE L YR S K+ +++ V+K +DE
Sbjct: 89 ELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVKILNIIKKHAPVVKKASIDE 148
Query: 492 NFIDVTSLVE 521
FI++TS V+
Sbjct: 149 CFIELTSDVK 158
>UniRef50_Q14N03 Cluster: Putative dna polymerase iv c-terminal
truncated protein; n=1; Spiroplasma citri|Rep: Putative
dna polymerase iv c-terminal truncated protein -
Spiroplasma citri
Length = 90
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN---IVVTSNYEARNYGVSKCMLVTDA 362
K I HID++ F+A V NP L+ PL + + +V T+NYEAR G++ M + A
Sbjct: 2 KVIFHIDMNSFFASCHQVANPHLQGKPLVVANSSRQAVVTTANYEARQLGINSPMPLYKA 61
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVF 440
++C +L++V +D Y + K+F
Sbjct: 62 KEICHHLEIVK-QDFGLYVDFAQKLF 86
>UniRef50_A7AX68 Cluster: ImpB/MucB/SamB family protein; n=1;
Babesia bovis|Rep: ImpB/MucB/SamB family protein -
Babesia bovis
Length = 1246
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL------GIQQKNIVVTSNYEARNYGVSKCMLVTD 359
I HID+D F+ V + L+++PL G + + T NY AR YGVSK M V D
Sbjct: 432 IFHIDMDAFFVSVAIKGKQHLKNMPLCISYGTGRNSASEIATCNYAARVYGVSKGMWVRD 491
Query: 360 ALKVCPNLKLV 392
A+++CP+L+ V
Sbjct: 492 AVQLCPSLQFV 502
>UniRef50_A7F1S2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 465
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNL 383
+D D FYAQ EMVR PL +QQ N ++ NY AR +G S+ V + ++CPN+
Sbjct: 41 VDYDAFYAQCEMVRLKLDASQPLAVQQWNAIIALNYAARGFGFSRGASVEEVRRLCPNI 99
Score = 36.7 bits (81), Expect = 0.56
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
L I +QI +RK+I++ L YT AGIA NK
Sbjct: 232 LNIGAQIVRNLRKEIFESLHYTCSAGIAQNK 262
>UniRef50_Q6CYA8 Cluster: Similar to sgd|S0002827 Saccharomyces
cerevisiae YDR419w RAD30 DNA repair protein; n=1;
Kluyveromyces lactis|Rep: Similar to sgd|S0002827
Saccharomyces cerevisiae YDR419w RAD30 DNA repair
protein - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 645
Score = 51.6 bits (118), Expect(2) = 1e-06
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
I HID++ F+AQVE VR RD P+ Q ++ +Y AR Y VS+ + DA+K C
Sbjct: 26 IAHIDVNAFFAQVEQVRCGFSRDDPVVAVQWTSILAVSYAARKYNVSRMESILDAIKKCD 85
Query: 378 NLKLVN------GEDLHSYRTASG 431
+ ++ GED Y G
Sbjct: 86 KIIPIHTAVFRKGEDYWQYHDGCG 109
Score = 23.8 bits (49), Expect(2) = 1e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 405 LHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
L YR S K+ + Q VEK +DE FI++
Sbjct: 128 LEPYRRESRKLIKLFQDEYDLVEKASVDEAFIEL 161
>UniRef50_A3GH67 Cluster: DNA repair protein; n=1; Pichia
stipitis|Rep: DNA repair protein - Pichia stipitis
(Yeast)
Length = 1118
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDV---PLGIQ---QKNIVVTSNYEARNYGVSKCMLVTD 359
I H+D DCF+A + PEL D+ P+ + + + V + NY ARN+GV M V+
Sbjct: 407 IFHVDFDCFFATASCLNRPEL-DINKDPIAVTHGGKSSDVASCNYVARNFGVKNGMWVSQ 465
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKVF 440
A K+CPNL +++ D Y + S + +
Sbjct: 466 AKKLCPNLIMLD-YDYKRYESYSSEFY 491
>UniRef50_Q18V51 Cluster: UMUC-like DNA-repair protein; n=2;
Desulfitobacterium hafniense|Rep: UMUC-like DNA-repair
protein - Desulfitobacterium hafniense (strain DCB-2)
Length = 423
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVTDA 362
I+ D + +YA NPEL+ PL + + I++T++YEAR YGV M + A
Sbjct: 16 IVLFDANSYYASCHQAVNPELQGKPLLVAGDPRNRTGIILTASYEARFYGVKTAMPLFQA 75
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGW--RCPVEKLGMDENFID 503
LK+CP +V D Y S K++ +++ + +E + +DE F D
Sbjct: 76 LKLCPE-AVVLSPDFRLYLDLSRKMWEIVERYTDEDHIEVVSVDECFAD 123
>UniRef50_Q5BVL2 Cluster: SJCHGC04877 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04877 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 55.2 bits (127), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNYEARNYGVSKCMLVTDA 362
++ +D+DCFY QVE PE + P + Q + + +YEAR G+ + M +
Sbjct: 7 VMLLDMDCFYVQVEQREAPETKGKPCIVSQYSEWKGGGALAISYEARALGIKRGMFGDEI 66
Query: 363 LKVCPNLKLVN-----GE-DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
P++ + G+ +L YR AS +V + + +E+ +DE ++D+T++V+
Sbjct: 67 RAHYPDVIIFKVPEKRGKAELTKYRVASSEVIQCISEFTSDIERASIDEAYVDLTAIVDS 126
Query: 525 KL-KNANLNDL 554
L ++ NL+ L
Sbjct: 127 TLDRDNNLSSL 137
>UniRef50_Q4QCF3 Cluster: DNA polymerase eta, putative; n=3;
Leishmania|Rep: DNA polymerase eta, putative -
Leishmania major
Length = 786
Score = 55.2 bits (127), Expect = 2e-06
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Frame = +3
Query: 117 NDTNMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVR-NPELRDVPLGIQQKN 293
+DT D R S +C + + I H+D+DCFYAQVE VR + R P + Q
Sbjct: 10 SDTGEDARCRSSPRVSCL-CSADAMRCIAHMDMDCFYAQVEAVRLGVDCRVTPFALVQWG 68
Query: 294 IVVTSNYEARNYGVSK-CMLVTDALKVCPNLKLVN------GE----------------D 404
+ NY AR GV + C+ + + P++++ + GE
Sbjct: 69 SFIAVNYPARARGVRRFCLSPDEVRRELPDVRMSHIATYAMGESEYCYPEAPHINTHKVS 128
Query: 405 LHSYRTASGKVFLVLQGW-RCPVEKLGMDENFIDVTSLVEEKL 530
L YR AS ++F +L+ V K G+DE ++DVT +L
Sbjct: 129 LEPYRHASRQIFAILRAEPGVVVGKAGIDEAYVDVTEAARREL 171
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 627 ASQIANEMRKKIYDELGYTTCAGIAHNK 710
AS++ + +R++IY EL Y AGIAHN+
Sbjct: 260 ASRVVHRLRQRIYAELHYDCSAGIAHNR 287
>UniRef50_Q4A688 Cluster: DNA polymerase IV; n=2; Mycoplasma
synoviae 53|Rep: DNA polymerase IV - Mycoplasma synoviae
(strain 53)
Length = 413
Score = 54.8 bits (126), Expect = 2e-06
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQ---KNIVVTSNYEARNYGVSKCMLVTDALK 368
I HID D ++ P L++ P+ I + K++ V+ +YE + G M D LK
Sbjct: 9 IFHIDFDSYFVSAVRTIKPYLKNKPVAIARSSYKSLAVSVSYELKVKGAKAGMTRGDILK 68
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQ-GWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
+ PN V+ ED Y S K+F LQ + +DE ++DV LV ++ K NL
Sbjct: 69 IEPNTIFVS-EDFSLYTNLSRKIFAYLQEKISHKILIASVDECYLDVNHLVNDEKKALNL 127
>UniRef50_Q4PIG2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 865
Score = 54.4 bits (125), Expect = 3e-06
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVR-NPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+ H D+D YAQ E R + VP+ +QQ ++ NY AR+ GVS+ + +ALK C
Sbjct: 116 VAHCDVDAAYAQFEASRLGLDATVVPIAVQQWQGLIAVNYPARDAGVSRFESIPEALKKC 175
Query: 375 PNLKLV---------NGEDLH-------------SYRTASGKVFLVLQGWRCP---VEKL 479
P+L LV N D H YR S K+ + + CP VEK
Sbjct: 176 PDLHLVHVATYAHGSNKPDYHPDPKPETHKVSLDHYRRESTKILTIFKR-TCPHGAVEKA 234
Query: 480 GMDENFIDVTSLVEEKL 530
+DE++ D+T V + L
Sbjct: 235 SIDESYFDLTIEVRKLL 251
Score = 38.3 bits (85), Expect = 0.18
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
L + +++ N +R+ + DELGYTT AGI NK
Sbjct: 406 LALGAELMNRVRQNVLDELGYTTSAGIGSNK 436
>UniRef50_A6SHZ0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1122
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPL----GIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
++H+D D F+ V + E D P G + + + NY AR +G+ M + A+
Sbjct: 437 VMHVDFDSFFCAVSLKSASEFVDKPAVVAHGSGTGSEIASCNYPAREFGIKNGMWMKSAI 496
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
K+CP++K++ + +Y AS + + V+ + +DE +D+TSL
Sbjct: 497 KLCPDIKVL-PYNFPAYEDASKLFYEAILDVGGVVQSVSVDEALVDITSL 545
>UniRef50_A0RUK5 Cluster: Nucleotidyltransferase/DNA polymerase
involved in DNA repair; n=2; Thermoprotei|Rep:
Nucleotidyltransferase/DNA polymerase involved in DNA
repair - Cenarchaeum symbiosum
Length = 363
Score = 54.4 bits (125), Expect = 3e-06
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
++H+D D F+AQ E R PELR P+ + V T+NY AR +GV + ++
Sbjct: 5 VLHVDFDHFFAQCEEARRPELRSGPVVVCVFSDRGGDSGAVATANYAARKFGVKSGIPIS 64
Query: 357 DA---LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
A L P+ + D Y S + ++G+ E +G DE ++DVT
Sbjct: 65 HAKSRLHEVPDAVFLPA-DFAYYSGISQEAMDEMKGFADVFEYVGKDEAYMDVTRRTGGD 123
Query: 528 LKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
K A+ V + + C G ++ S+IA++ +K
Sbjct: 124 YKKASYLAQQVKNAVRRKTRLTCSVGVTPN-RLLSKIASDYKK 165
>UniRef50_A3VP13 Cluster: DNA polymerase IV; n=1; Parvularcula
bermudensis HTCC2503|Rep: DNA polymerase IV -
Parvularcula bermudensis HTCC2503
Length = 422
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVP--LGIQQKNIVVTSNYEARNYGVSKCMLVTDALK 368
SI H+D D F+A +E +P L D P +G + +V T Y AR+YG+ M + A
Sbjct: 34 SIAHVDCDAFFAAIEKRDDPSLVDKPVLVGGGHRGVVSTCCYIARSYGIHSAMPMFKAKA 93
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDV 506
+CP +V +YR A+ ++ ++ ++ + +DE ++D+
Sbjct: 94 LCPQAVIVPPRGA-AYREAAAQIRDLMAPLTPLIQPVSIDEAYLDL 138
>UniRef50_A3XQV7 Cluster: DNA polymerase IV; n=12;
Bacteroidetes|Rep: DNA polymerase IV - Leeuwenhoekiella
blandensis MED217
Length = 406
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCMLVTDA 362
++I+H+DLD F+ E N L P+ G + +V ++YE R +GV M + A
Sbjct: 3 RNILHLDLDTFFVSCERRLNSSLIGKPVIVGGTGDRGVVSAASYECRAFGVHSGMAMRMA 62
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
++CP + G + Y S V +LQ +EK +DE + D+T +
Sbjct: 63 RQLCPQATYIRG-NASVYTKFSKMVTEILQEQVPVLEKSSVDEFYADLTGM 112
>UniRef50_Q4Q268 Cluster: DNA damage repair protein, putative; n=3;
Leishmania|Rep: DNA damage repair protein, putative -
Leishmania major
Length = 619
Score = 53.6 bits (123), Expect = 5e-06
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Frame = +3
Query: 183 EHFKSIIHIDLDCFYAQVEMVRNPE---LRDVPLGI---QQKNIVVTSNYEARNYGVSKC 344
E ++ +HID+D F+ V++ + PE L+ P+GI + + + + NY AR+YG+
Sbjct: 54 EQQRTFVHIDMDAFFCSVQLAK-PEYAHLKTKPVGIAAGKYNSDISSCNYVARSYGIHAG 112
Query: 345 MLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
M V A + CP L + G DL + + ++ ++ K+ M+ ID L +
Sbjct: 113 MYVNSAKERCPEL-VTLGYDLEACERVAKTLYQIIFDLFPTGVKMSMEVYSIDEVMLAAD 171
Query: 525 KLKNANLNDL--IVMGQLYSEPSAECPCGCHNRLKIASQIANEMRK 656
A L V +L+S CG + +A ++A + K
Sbjct: 172 TTDYALLQPFCETVRRELFSATGCTASCGIGPNIMLA-RVATDRGK 216
>UniRef50_A6NU31 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 414
Score = 52.8 bits (121), Expect = 8e-06
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRD--VPLGI-----QQKNIVVTSNYEARNYGVSKCML 350
++I+H DL+ FYA VE++ PELR+ P+ + + I++ N A+ GV
Sbjct: 3 RTILHCDLNSFYASVELLSLPELRESGKPVAVCGDPESRHGIILAKNEPAKAMGVKTAET 62
Query: 351 VTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ A + CP+L L+ YR S V + + VE +DE+++D+T
Sbjct: 63 IWQARQKCPDLVLLPAH-RDQYRKYSRIVNAIYDRFTDLVEPFSIDESWLDIT 114
>UniRef50_A5EBX2 Cluster: DNA polymerase IV; n=2;
Bradyrhizobiaceae|Rep: DNA polymerase IV -
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 330
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQKNIVVTSNYEARNYGVSKCM 347
+ IIHID+D FYA VE NP LR P+ G +++ +V ++YEAR +GV M
Sbjct: 26 RKIIHIDMDAFYASVEQRDNPGLRGKPVAVGGSKERGVVAAASYEARAFGVRSAM 80
>UniRef50_A4RZL9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 429
Score = 52.8 bits (121), Expect = 8e-06
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCM 347
+ + H+D D F+A VE RNP LRDVP+ ++Q ++ ++ AR G +K M
Sbjct: 28 RCVAHVDADAFFAAVEKQRNPRLRDVPVAVRQHGDIICVDHRARELGATKHM 79
>UniRef50_Q7Q6B2 Cluster: ENSANGP00000004566; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000004566 - Anopheles gambiae
str. PEST
Length = 1010
Score = 52.8 bits (121), Expect = 8e-06
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR GV M V ALK+CP LK + D YR + +++ + + +E
Sbjct: 362 IASCSYEARQCGVKNGMFVGAALKLCPELKTI-PYDFDGYREVAHQLYDTIARYTLDIEA 420
Query: 477 LGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGC-HNRLK 623
+ DE F+D+T L++ V ++ + +C G NRL+
Sbjct: 421 VSCDEMFVDLTELLQSTGVGVMEFVTYVRNEISTATGCDCSAGIGANRLQ 470
Score = 36.3 bits (80), Expect = 0.74
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 165 CNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI 281
C+ + + + I+HID+DCF+ V + + P LR +P+ +
Sbjct: 268 CDFSNESNARYIMHIDMDCFFVSVGLRKYPHLRGLPVAV 306
>UniRef50_A6CAV0 Cluster: DNA-damage-inducible protein P; n=1;
Planctomyces maris DSM 8797|Rep: DNA-damage-inducible
protein P - Planctomyces maris DSM 8797
Length = 388
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = +3
Query: 213 LDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTDALKVCPN 380
+D FYA +E +PEL+ P+ + + + +V +NY AR +GV M + A ++CP
Sbjct: 1 MDAFYASIEERDHPELQGQPIIVGGRAEHRGVVSAANYPARKFGVHSAMPMKTARQLCPQ 60
Query: 381 LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+ Y S + + + + VE L +DE F+DV+
Sbjct: 61 AHFFPVR-MSDYAEVSQSLQKIFRKYTPLVEPLSLDEAFLDVS 102
>UniRef50_Q6CIW8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 829
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +3
Query: 204 HIDLDCFYAQV--EMVRNPELRDVPLGIQQ--KNIVVTS-NYEARNYGVSKCMLVTDALK 368
HID DCF+AQV ++ ++ P+ I N ++S NY AR++GV M V+ ALK
Sbjct: 218 HIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGMWVSSALK 277
Query: 369 VCPNLKLVNGEDLHSYRTASGKVFLVLQ 452
+CP+LK+++ E Y S + L+
Sbjct: 278 LCPDLKILDYE-FDEYEAISNLFYSALK 304
>UniRef50_Q6KZW2 Cluster: DNA polymerase IV; n=3; Archaea|Rep: DNA
polymerase IV - Picrophilus torridus
Length = 344
Score = 52.4 bits (120), Expect = 1e-05
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
I+ ID D F+AQVE + +P L+ P+ + ++ V TSNYEAR G+ M +
Sbjct: 2 IMLIDFDYFFAQVEEINDPSLKGKPVVVSVYSGRNERSGAVATSNYEARALGIKSGMPLY 61
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL-----VE 521
AL++ N + Y+ S K+ ++ + +E +DE +ID+ +
Sbjct: 62 RALEIGKNRAVFLPIRKDFYQKYSDKIMDIISEYSEKMEIASIDEAYIDIDGNDCKIGIA 121
Query: 522 EKLKNANLND 551
++KN LN+
Sbjct: 122 NEIKNRILNE 131
>UniRef50_Q6KI15 Cluster: DNA-damage repair protein; n=1; Mycoplasma
mobile|Rep: DNA-damage repair protein - Mycoplasma
mobile
Length = 411
Score = 51.6 bits (118), Expect = 2e-05
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCMLVTDA 362
K+I HID D F+ + PEL+ + + + +IV + +YEA+ G M + +
Sbjct: 5 KTIFHIDADSFFVNSIITIRPELKGKEVAVSSTKSSSIVSSLSYEAKQKGAKVPMQMREV 64
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNA 539
K CPN+ V + + S K+F + + + +E +DE ++DVT ++
Sbjct: 65 RKYCPNIITVL-PNFKLFSIISNKIFDYLAKNFTKKLEIASIDECYLDVTDILHNYENKY 123
Query: 540 NLNDLIVMGQLYSEPSAECPCG-CHNRL--KIASQIA 641
NL + G +Y G HN+ K+AS +A
Sbjct: 124 NLARKMQEG-VYKYTKIPISIGISHNKFLAKMASPLA 159
>UniRef50_Q30PG7 Cluster: DNA-directed DNA polymerase; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep:
DNA-directed DNA polymerase - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 444
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 288 KNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP 467
+ I+ TS+YEAR YGV M + +AL +CP+L ++ D+ Y+ S ++ LQ
Sbjct: 102 RGILTTSSYEARAYGVKTAMSIKEALSLCPHL-IIKAPDMSLYQKLSHELHEFLQTKIPL 160
Query: 468 VEKLGMDENFIDVTSLVEE 524
VE+ +DE + D++ V++
Sbjct: 161 VEQASIDEFYGDLSGWVDD 179
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVS 338
IHID+DCF+ ++ P L P+ I ++ N +A+ V+
Sbjct: 24 IHIDIDCFFVSAARIQEPSLEFKPVAIGGRSDTKIFNKDAKKQAVN 69
>UniRef50_A4F5J4 Cluster: Putative uncharacterized protein; n=1;
uncultured bacterium|Rep: Putative uncharacterized
protein - uncultured bacterium
Length = 418
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVT 356
+SI+H D++ FYA VE + +P L+ P+ + ++ IV+ NY+A+ + V V
Sbjct: 10 RSILHCDMNNFYASVECMLDPALKKYPIAVCGSVEERHGIVLAKNYKAKAFDVKTGDAVW 69
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
A + C +L +V Y S V + + VE GMDE ++D++
Sbjct: 70 QAKQKCKDLVVV-PPHYEEYIKYSKLARSVYERYTDQVEPYGMDECWLDIS 119
>UniRef50_Q9W0P2 Cluster: CG12189-PA; n=3; Sophophora|Rep:
CG12189-PA - Drosophila melanogaster (Fruit fly)
Length = 995
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/119 (24%), Positives = 53/119 (44%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR G+ M V ALK+CP LK + D Y+ + ++ + + +E
Sbjct: 359 IASCSYEAREKGIRNGMFVGQALKLCPELKTI-PYDFEGYKEVAFTLYDTVAQYTLNIEA 417
Query: 477 LGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMR 653
+ DE F+++T L E + + ++YS+ C G +A E +
Sbjct: 418 VSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAK 476
Score = 36.7 bits (81), Expect = 0.56
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI 281
++HID+DCF+ V + PELR +P+ +
Sbjct: 275 VMHIDMDCFFVSVGLRTRPELRGLPIAV 302
>UniRef50_Q2HFL9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1141
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRN-PELRDVPLGIQQK----NIVVTSNYEARNYGVSKCMLVTDA 362
I+H+D D F+ V + R+ P+ RD P + + + + NY AR +GV M + A
Sbjct: 313 IMHVDFDSFFCAVSLNRHAPDHRDKPTVVAHSTGSGSEIASCNYPARKFGVKNGMWMKRA 372
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLV 518
++ P++K+V D +Y AS + + V+ + +DE +D+T ++
Sbjct: 373 QELYPDIKVV-PYDFPAYEEASKLFYDAILDVGGVVQSVSIDEALVDITDII 423
>UniRef50_A5D243 Cluster: Nucleotidyltransferase/DNA polymerase;
n=2; Clostridia|Rep: Nucleotidyltransferase/DNA
polymerase - Pelotomaculum thermopropionicum SI
Length = 402
Score = 48.4 bits (110), Expect(2) = 3e-05
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVTDA 362
I+ D++ FYA V P L+ P+ + ++ IV+ ++ EA+ GV M V +A
Sbjct: 5 ILLADMNSFYASVHQAMEPRLKGKPVIVGGDPARRHGIVLAASVEAKACGVKTGMTVREA 64
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+CP + H Y S ++ +++ + VE +DE F+DV+
Sbjct: 65 AALCPQGIFLKPRHSH-YINFSARIIRIMKDFSPLVEPFSIDEAFMDVS 112
Score = 22.2 bits (45), Expect(2) = 3e-05
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 603 GCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
GC + +IA +++ +I +E+G G+ NK
Sbjct: 113 GCGLLFGSSLEIAVKLKARIKNEVGVLCSVGVGPNK 148
>UniRef50_Q6BS95 Cluster: Similar to CA1452|CaREV1 Candida albicans
CaREV1; n=1; Debaryomyces hansenii|Rep: Similar to
CA1452|CaREV1 Candida albicans CaREV1 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1175
Score = 50.8 bits (116), Expect = 3e-05
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNP--ELRDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTD 359
+I+H+D DCF+A + +P ++ P+ + + + + + NY AR +GV M
Sbjct: 457 AILHVDFDCFFATASCLNHPNLDINKDPIAVTHGGRTSDIASCNYVARKFGVRNGMWSGK 516
Query: 360 ALKVCPNLKLVNGEDLHSYRTASGKV--FLVLQGWRCPVEKLGMDENFIDVTSLVEE--K 527
A ++CP L ++ D +Y S K +L+ +G + + +DE +D TS E +
Sbjct: 517 AKQLCPELIQLD-YDFDAYERCSAKFYDYLISRGIFDHIFPVLIDEVLLDATSFCLESGR 575
Query: 528 LKNANLNDL 554
L+ +N+L
Sbjct: 576 LREDIINEL 584
>UniRef50_Q5CPV1 Cluster: DinB/family X-type DNA polymerase; n=1;
Cryptosporidium parvum Iowa II|Rep: DinB/family X-type
DNA polymerase - Cryptosporidium parvum Iowa II
Length = 358
Score = 50.4 bits (115), Expect = 4e-05
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 26/142 (18%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPN-- 380
ID+D F+AQV V RD PL + N+V+ NY +R GV++ M + L +CP
Sbjct: 40 IDMDAFFAQVCHVEYNIPRDKPLAVINNNVVLAVNYPSREKGVNRKMSKEEILSICPEII 99
Query: 381 -------------LKLVNGEDLHS---------YRTASGKVFLVLQGW--RCPVEKLGMD 488
L+L N ++L+ +R AS VF L+ + C + +D
Sbjct: 100 IPQNVFLDARGQYLELFNDDNLNMTYQKLSLDIFRKASKMVFTKLKSYLPTCNAQIASID 159
Query: 489 ENFIDVTSLVEEKLKNANLNDL 554
E + D+T+++ +K+ N+ N L
Sbjct: 160 EIYFDLTNII-QKIFNSIKNYL 180
>UniRef50_A6QA22 Cluster: DNA polymerase IV; n=1; Sulfurovum sp.
NBC37-1|Rep: DNA polymerase IV - Sulfurovum sp. (strain
NBC37-1)
Length = 422
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = +3
Query: 288 KNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP 467
+ I+ T++YEAR YGV M + AL++CP + +V + Y S ++ +
Sbjct: 83 RGIITTASYEARAYGVKTAMPIAQALQLCPQMVVV-PSNYPRYHRFSHQIHAFMMKEMPK 141
Query: 468 VEKLGMDENFIDVTSLVEEK 527
VE+ +DE F DV+ +E++
Sbjct: 142 VEQFSIDEFFADVSGWIEDE 161
>UniRef50_A5BB36 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 500
Score = 50.0 bits (114), Expect = 6e-05
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +3
Query: 222 FYAQVEMVRNPELRDVPLGIQQKNI------VVTSNYEARNYGVSKCMLVTDALKVCPNL 383
F + V + NPEL+D P+ + N + ++NY AR+YGV + V DA +CP+L
Sbjct: 258 FLSPVVIRXNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAKALCPHL 317
Query: 384 KLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLNDLIVM 563
++ + +Y + + + +L V+ + DE F++V ++ K + L I+
Sbjct: 318 -VIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEV---MDSKXGDPELLASIIR 373
Query: 564 GQLYSEPSAECPCGCHNRLKIA 629
+++ G L +A
Sbjct: 374 KEIFETTGCTASAGIAGNLLMA 395
>UniRef50_Q759A8 Cluster: ADR369Cp; n=1; Eremothecium gossypii|Rep:
ADR369Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 827
Score = 50.0 bits (114), Expect = 6e-05
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Frame = +3
Query: 135 DRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRN--PELRDVPLGI---QQKNIV 299
DR++ + N++ ++H+D DCF+A + ++ P +VPL + + V
Sbjct: 181 DRHLRMNEGALNDLRAPP-AHVLHVDFDCFFATISGIKAGYPSKAEVPLAVCHGGSSSDV 239
Query: 300 VTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRC--PVE 473
+ NY AR G+ M V+ A +CP L + Y T S + VL+G + V
Sbjct: 240 ASCNYAARECGIQNGMWVSKAKNLCPQLVCL-PYTYDEYETISNAFYEVLEGLKAFDAVY 298
Query: 474 KLGMDE 491
+ +DE
Sbjct: 299 PISVDE 304
>UniRef50_Q9UBZ9 Cluster: DNA repair protein REV1; n=32;
Euteleostomi|Rep: DNA repair protein REV1 - Homo sapiens
(Human)
Length = 1251
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR G+ M A ++CPNL+ V D H+Y+ + ++ L + +E
Sbjct: 508 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAV-PYDFHAYKEVAQTLYETLASYTHNIEA 566
Query: 477 LGMDENFIDVTSLVEE 524
+ DE +D+T ++ E
Sbjct: 567 VSCDEALVDITEILAE 582
Score = 34.3 bits (75), Expect = 3.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI 281
H I+H+D+DCF+ V + P+L+ P+ +
Sbjct: 415 HQSCIMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
>UniRef50_Q6BM10 Cluster: Similar to YALI0C01573g Yarrowia
lipolytica; n=1; Debaryomyces hansenii|Rep: Similar to
YALI0C01573g Yarrowia lipolytica - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 770
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCP 377
+ H+DL+ F+AQVE VR D P+ Q ++ +Y AR +G+ + + A + CP
Sbjct: 45 VAHVDLNAFFAQVEQVRLNLTADDPVVCAQWQSLIAVSYAARKFGIGRMDTIQSARQKCP 104
Query: 378 NL 383
N+
Sbjct: 105 NI 106
Score = 37.1 bits (82), Expect = 0.43
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 624 IASQIANEMRKKIYDELGYTTCAGIAHNK 710
I SQ+ E+R+++++ELGYTT G+ NK
Sbjct: 247 IGSQLLYEVRQQVFEELGYTTSGGLGKNK 275
>UniRef50_UPI0000E4A907 Cluster: PREDICTED: similar to deoxycytidyl
transferase, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to deoxycytidyl
transferase, partial - Strongylocentrotus purpuratus
Length = 1204
Score = 45.2 bits (102), Expect(2) = 2e-04
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + NY AR GV M + A +CP L+ + D Y+ S K++ ++ + +E
Sbjct: 431 IASCNYVARKAGVKNGMFMGRAKSLCPELQTI-PYDFDGYKRVSQKLYDIVASYTHDIEA 489
Query: 477 LGMDENFIDVTSLVEEKLKNA 539
+ DE F+D++ ++ + +A
Sbjct: 490 VSCDEMFVDISGILRDTKASA 510
Score = 39.5 bits (88), Expect = 0.080
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 183 EHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGI 281
E + I+HID+DCF+ V +++ P+L D P+ +
Sbjct: 321 EKMRRIMHIDMDCFFVSVGLIKRPDLVDKPVAV 353
Score = 22.2 bits (45), Expect(2) = 2e-04
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 627 ASQIANEMRKKIYDELGYTTCAGIAHN 707
A + A +RK+I D+ AGI N
Sbjct: 510 AEEFAQTLRKEIKDQTQCNASAGITSN 536
>UniRef50_Q4AAV0 Cluster: DNA polymerase IV; n=5; Mycoplasma
hyopneumoniae|Rep: DNA polymerase IV - Mycoplasma
hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)
Length = 385
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN---IVVTSNYEARNYGVSKCMLVTDA 362
K I HID+D F+ E+ NP+L+ P+ I + + V+ + E ++ G + +
Sbjct: 3 KIIAHIDIDNFFVSSELKLNPKLKGQPIVISRSEDFAMAVSVSKEVKSKGFKISDKINEI 62
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVT 509
K PNL LV +++ Y+ S + F + + + +E +DE FID+T
Sbjct: 63 KKKIPNL-LVIHPNINYYKFLSDQFFNFISKNFSKKIEVYSIDECFIDLT 111
>UniRef50_Q4Q8C3 Cluster: DNA polymerase kappa, putative; n=2;
Leishmania|Rep: DNA polymerase kappa, putative -
Leishmania major
Length = 293
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/96 (33%), Positives = 48/96 (50%)
Frame = +3
Query: 222 FYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGE 401
FYA VE +P LR+ P + ++ SNY AR YGV M A K+CP+L +
Sbjct: 2 FYAAVEEKLDPSLRERPFAVGSYAMLTPSNYIARAYGVRSGMPGFIAKKLCPSL-WIRPP 60
Query: 402 DLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
YR + +V ++ + +G+DE +DVT
Sbjct: 61 HFDLYRREAAEVRVMGALYDPHYVAVGLDELTMDVT 96
>UniRef50_Q4DBR5 Cluster: DNA damage repair protein, putative; n=3;
Trypanosoma|Rep: DNA damage repair protein, putative -
Trypanosoma cruzi
Length = 615
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVR--NPELRDVPLGI---QQKNIVVTSNYEARNYGVSKCML 350
H +H+D+D F+ V + + N +R+ P+ I + + + +SNY AR++GV M
Sbjct: 61 HQALFVHLDMDAFFCSVVLAKEENAHMREKPVCIAAGKGNSDISSSNYIARSFGVRAGMY 120
Query: 351 VTDALKVCPNLKLVN 395
V A ++CPNL++++
Sbjct: 121 VNAAKELCPNLQVLS 135
>UniRef50_Q97MB3 Cluster: DNA polymerase IV; n=1; Clostridium
acetobutylicum|Rep: DNA polymerase IV - Clostridium
acetobutylicum
Length = 396
Score = 47.6 bits (108), Expect = 3e-04
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQ---VEMVRNPE---LRDVP--LGIQQKN---IVVTSNYEARNYGVS 338
K I H+D++ + VE ++N E +R VP +G +K+ +V+ + A+ YG+
Sbjct: 3 KVIFHVDVNSAFLSWTAVEKLKNGEDIDIRKVPSVIGGDEKSRHGVVLAKSTPAKKYGIV 62
Query: 339 KCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTS 512
+ A K CPN+ LV +YR AS + +L+ + +EK +DE F+DVT+
Sbjct: 63 TGESLYHARKKCPNI-LVFPPRFDTYRKASESMMNLLKRFTPHIEKYSIDECFMDVTN 119
>UniRef50_A5DV91 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 731
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNL 383
+DL+ FYAQVE VR + P+ QQ ++ +Y AR YG+S+ V A CP+L
Sbjct: 50 VDLNAFYAQVECVRLGLSDEDPVVCQQWQSIIAVSYAARKYGISRLDTVHSAKLKCPHL 108
Score = 39.9 bits (89), Expect = 0.060
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +3
Query: 618 LKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
L + SQ+ ++R+ IY+ELGYTT AG+A N+
Sbjct: 250 LLLGSQLLLDLRRTIYEELGYTTSAGLARNR 280
>UniRef50_UPI0000F1EB8F Cluster: PREDICTED: similar to Rev1S; n=3;
Danio rerio|Rep: PREDICTED: similar to Rev1S - Danio
rerio
Length = 1268
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR GV M A ++CP+L+ V D H+Y+ + ++ +L + +E
Sbjct: 547 IASCSYEARQAGVRNGMFFGRAKQLCPDLQSV-PYDFHAYKEVALAMYEILASYTHNIEA 605
Query: 477 LGMDENFIDVTSLVEE 524
L DE +D T+L+ E
Sbjct: 606 LSCDEALVDATALLVE 621
>UniRef50_UPI0000D56635 Cluster: PREDICTED: similar to CG12189-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG12189-PA - Tribolium castaneum
Length = 825
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +3
Query: 240 MVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYR 419
M ELR + G + V + +YEAR GV M + A K+CP +K + D Y+
Sbjct: 262 MPEGVELRMID-GRSSMSEVASCSYEARKCGVKNGMFLGAAAKLCPQIKTI-PYDFEGYK 319
Query: 420 TASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVE 521
S ++ L + +E + DE +++V+ L++
Sbjct: 320 EVSMVLYKTLASYTLNIEAVSCDEMYVEVSDLLK 353
Score = 36.3 bits (80), Expect = 0.74
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI 281
++HID+DCF+ V + PELR +P+ +
Sbjct: 210 VMHIDMDCFFVSVGLRTRPELRGLPVAV 237
>UniRef50_A6X194 Cluster: DNA-directed DNA polymerase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep: DNA-directed DNA
polymerase - Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168)
Length = 424
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCMLVTDAL 365
+++D D F+A VE + LR P+G+ + V+ + EA+N+GV M + +A
Sbjct: 10 LYLDFDGFFASVEQQCDRRLRGRPIGVVPFEGTDRTAVIACSKEAKNFGVKNVMPIKEAK 69
Query: 366 KVCPNLKLV 392
++CP+L LV
Sbjct: 70 RLCPDLILV 78
>UniRef50_Q015X2 Cluster: DNA polymerase iota/DNA damage inducible
protein; n=1; Ostreococcus tauri|Rep: DNA polymerase
iota/DNA damage inducible protein - Ostreococcus tauri
Length = 492
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKV 371
+ ++H+D D F+AQVE +R+ LR +P+ ++Q +V + AR G K D +
Sbjct: 21 RCVLHVDADAFFAQVEALRDERLRGIPIAVRQHGDIVCVCHRARALGAKK----HDDVDA 76
Query: 372 CPNLKLVN-GEDLHSYRTA 425
C L N G+ +H TA
Sbjct: 77 CRTLLENNGGKVIHVNTTA 95
>UniRef50_A3LN71 Cluster: DNA polymerase eta subunit; n=1; Pichia
stipitis|Rep: DNA polymerase eta subunit - Pichia
stipitis (Yeast)
Length = 733
Score = 46.8 bits (106), Expect = 5e-04
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNLK 386
IDL+ F+AQVE +R + P+ Q + ++ +Y AR +G+ + + A + CPNL
Sbjct: 49 IDLNAFFAQVEQLRLGLPVETPVVCVQWSTLIAVSYAARKFGIGRLDTLQSAKQKCPNLV 108
Query: 387 LVN------GE-----------------DLHSYRTASGKVFLVLQGWRCPVEKLGMDENF 497
+ GE L YR S K+ + Q VEK +DE++
Sbjct: 109 CAHAAVFKKGESHWAYTKGLPNQATHKVSLDPYRRESRKIVKIFQQHCDLVEKASVDESY 168
Query: 498 IDVTSLVEEKLKNANLNDLIVMGQ 569
+D+ LV +KL +L L+ GQ
Sbjct: 169 LDLGRLVYKKL--LSLFPLLAEGQ 190
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 624 IASQIANEMRKKIYDELGYTTCAGIAHNK 710
I S I ++RK +YDE+GYTT AGIA NK
Sbjct: 251 IGSMIVLDIRKALYDEMGYTTSAGIASNK 279
>UniRef50_Q0FDK2 Cluster: UMUC-like DNA-repair protein; n=1; alpha
proteobacterium HTCC2255|Rep: UMUC-like DNA-repair
protein - alpha proteobacterium HTCC2255
Length = 401
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGIQ----QKNIVVTSNYEARNYGVSKCMLVTDALK 368
I+ID++ F+A VE P LR P+GI +V ++YEA+ +GV M + +A
Sbjct: 7 IYIDMNSFFASVEQHEEPYLRGKPVGITAMEGDVGCLVAASYEAKYFGVKTTMSIKEAKI 66
Query: 369 VCPNLKL 389
+CP + L
Sbjct: 67 LCPKIIL 73
>UniRef50_P54560 Cluster: DNA polymerase IV 2; n=4; Bacillus|Rep:
DNA polymerase IV 2 - Bacillus subtilis
Length = 412
Score = 46.4 bits (105), Expect = 7e-04
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPL---GIQQK--NIVVTSNYEARNYGVSKCMLVT 356
K I +D+ FYA VE NP L++ P+ G +K +V+ + A+ GV +
Sbjct: 5 KVIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPLAKQKGVVNASRLW 64
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
+A + CP ++ + Y S ++ +L+ + VE +DE F+D+T
Sbjct: 65 EAQEKCPEAVVLRPR-MQRYIDVSLQITAILEEYTDLVEPYSIDEQFMDIT 114
>UniRef50_A3ZXX8 Cluster: ImpB/MucB/SamB family protein; n=1;
Blastopirellula marina DSM 3645|Rep: ImpB/MucB/SamB
family protein - Blastopirellula marina DSM 3645
Length = 407
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGI----QQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+D++ ++A VE PELR P+G+ ++ ++Y+A+ GV V DA ++C
Sbjct: 9 MDMNSYFASVEQQLRPELRKQPVGVVPLDTDSTCIIAASYDAKRSGVKVGTKVYDARRLC 68
Query: 375 PNLKLV 392
P ++L+
Sbjct: 69 PGIQLI 74
>UniRef50_A7TRR0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 880
Score = 44.0 bits (99), Expect = 0.004
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 153 SCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPEL-----RDVPLGIQ-QKNIVVTS-N 311
S +T +I E I H+D DCF+A V + ++ +D L KN + S N
Sbjct: 242 SSNTRRKIQKEDTLKIFHVDFDCFFATVAALSVTDMAIDINKDAILVCHGSKNSDIASCN 301
Query: 312 YEARNYGVSKCMLVTDALKVCP-NLKLV 392
Y ARN G+ M V+ A K+CP +KL+
Sbjct: 302 YVARNLGIKNGMWVSRAEKLCPKGMKLI 329
>UniRef50_Q8TIW3 Cluster: DNA polymerase IV; n=4;
Methanosarcinaceae|Rep: DNA polymerase IV -
Methanosarcina acetivorans
Length = 366
Score = 44.0 bits (99), Expect = 0.004
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVT 356
IIH+D+D FYA +E PEL + + + V T NY AR +G+ M +
Sbjct: 6 IIHVDMDYFYAAIEEREKPELLGKAVVVCMLSGRSELSGSVSTCNYIAREFGIRSGMPCS 65
Query: 357 DALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCP------VEKLGMDENFIDVT 509
A K+ P + Y + S ++ +L+ + P E++ +DE F+++T
Sbjct: 66 RAKKLNPEAVFLPVRK-EFYTSVSDRIMEILRSYADPGENGDSFEQISVDEAFLEIT 121
>UniRef50_Q4S0P1 Cluster: Chromosome 2 SCAF14781, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14781, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1313
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR GV M A ++CP+L+ V D +Y+ + ++ L G+ +E
Sbjct: 627 IASCSYEARQAGVRNGMFFGKAKQLCPSLQAV-PYDFEAYKEVALTMYDTLAGYTHDIEA 685
Query: 477 LGMDENFIDVTSLVEEKLKN 536
L DE +D ++L+ E N
Sbjct: 686 LSCDELLMDTSALLAELCVN 705
Score = 32.7 bits (71), Expect = 9.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI 281
I H+D+DCF+ V + P+L+ P+ +
Sbjct: 509 IFHVDMDCFFVSVAIRNRPDLKGKPVAV 536
>UniRef50_Q4FMY4 Cluster: UmuC; n=5; Bacteria|Rep: UmuC -
Pelagibacter ubique
Length = 426
Score = 43.6 bits (98), Expect = 0.005
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN--IVVTSNYEARNYGVSKCMLVTDAL 365
K I +D + FY E + NP++R+ P+ + N ++ + EA+ G+ A
Sbjct: 8 KKIALVDCNSFYVSCERLFNPKIRNKPVVVLSNNDGCIIARSNEAKFLGIKMGEPYFKAK 67
Query: 366 K-VCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNAN 542
+ + N V + Y S +V L+ + +E +DE F+D+++ ++++++
Sbjct: 68 EIILKNKVYVFSSNYSLYGDLSRRVMRTLKRFNPELEIYSVDEAFLDLSNYPDDEVEDVG 127
Query: 543 LNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGI 698
++ Q P++ G + K S+IAN + KK + G T GI
Sbjct: 128 KEIRSIILQWTGIPTS---IGI-AKTKTLSKIANHIAKK--KQSGVTNLIGI 173
>UniRef50_A5ZP81 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 429
Score = 43.6 bits (98), Expect = 0.005
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRN-----PELRDVPLGI-----QQKNIVVTSNYEARNYGVSKCM 347
I HID++ + E R +LRD+P I ++ IVV + A+ YG++
Sbjct: 5 IFHIDVNSAFLSWESARRVKQGLSDLRDIPACIGGDPKKRTGIVVAKSIPAKKYGITTGE 64
Query: 348 LVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
V AL+ CP L +V D Y S + + +E +DE F+D+T
Sbjct: 65 PVAMALRKCPELVIVK-SDFELYIKCSRAFKEICASYAPVMESFSIDEVFLDMT 117
>UniRef50_A5KIM1 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 421
Score = 43.6 bits (98), Expect = 0.005
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Frame = +3
Query: 198 IIHIDLDCFYAQ---VEMVRNP---ELRDVP--LGIQQKN---IVVTSNYEARNYGVSKC 344
I HID++ Y VE ++N ++R++P +G Q + +V+ + A+ YG+
Sbjct: 25 IFHIDVNSAYLSWTAVEQLKNGAKVDIREIPAIIGGDQTSRHGVVLAKSTFAKKYGIRTG 84
Query: 345 MLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
V +A + CPNL ++ D YR S ++ L+ + +E++ +DE ++D T +
Sbjct: 85 EPVANAFRKCPNL-VMYPPDHRMYREKSRQMMEYLKTFTKEIEQVSVDECYMDFTKI 140
>UniRef50_Q5AHQ7 Cluster: Putative uncharacterized protein RAD30;
n=2; Candida albicans|Rep: Putative uncharacterized
protein RAD30 - Candida albicans (Yeast)
Length = 640
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 195 SIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVC 374
+I IDL+ F+AQVE +R P+ Q N V+ +Y +R +G+++ + C
Sbjct: 48 TIALIDLNAFFAQVEQIRLNLTNQDPVVCAQWNSVIAVSYASRKFGITRMDTIASCKSKC 107
Query: 375 PNL 383
PN+
Sbjct: 108 PNV 110
Score = 39.9 bits (89), Expect = 0.060
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 624 IASQIANEMRKKIYDELGYTTCAGIAHNK 710
I SQI E+RK I++ELGYTT AG+A K
Sbjct: 250 IGSQILLEVRKDIFEELGYTTSAGLARTK 278
>UniRef50_A7HFE4 Cluster: DNA-directed DNA polymerase; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: DNA-directed DNA
polymerase - Anaeromyxobacter sp. Fw109-5
Length = 459
Score = 43.2 bits (97), Expect = 0.006
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 7/175 (4%)
Frame = +3
Query: 207 IDLDCFYAQVEMVRNPELRDVPLGIQQK----NIVVTSNYEARNYGVSKCMLVTDALKVC 374
+DLD F+ VE + +P L P+ + K +V ++YE R GV M + +A K
Sbjct: 21 LDLDTFFVSVERLLDPTLEGKPVVVGGKPGSRGVVTAASYEVRRLGVKSGMSLFEAGKRA 80
Query: 375 PN-LKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANLND 551
PN + L D+ Y T + +V + + + V +DE ++D +
Sbjct: 81 PNAIYLPTRHDV--YGTYAERVREIARRFAPTVRVASIDEMYLDFSG------------- 125
Query: 552 LIVMGQLYSEPSAECPCGCHNRL--KIASQIANEMRKKIYDELGYTTCAGIAHNK 710
+LY A G +R I ++ I+DELG + AG+A +K
Sbjct: 126 ---CERLYRSAGAARENGAEDRAGDAIIEGAVLQLTTAIFDELGLPSSAGVATSK 177
>UniRef50_Q4PCE3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1488
Score = 41.9 bits (94), Expect = 0.015
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 25/195 (12%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI------------------------QQKNIVVT 305
I+HID D F+ V + + P+L+D P+ + + + +
Sbjct: 525 IMHIDFDSFFVAVGLKKRPDLKDKPVVVCHGTGFGLPAAKAGDENRPADNQSSSTSEIAS 584
Query: 306 SNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGM 485
+Y+AR +G+ M + A ++C +++ + D +Y + S + L ++ + +
Sbjct: 585 CSYKAREFGIRNGMSLGQAKRLCSHVETI-PYDFEAYNSVSLTFYTFLLEHSDALQAVSV 643
Query: 486 DENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIA-SQIANEMRKKI 662
DE +DV SL+ + +++ + ND G LY G ++ A Q+A R +I
Sbjct: 644 DEALVDV-SLLLQSMRDGDTND----GSLYQRYRDH--LGSQGQVWTAEKQLAEAFRDEI 696
Query: 663 YDELGYTTCAGIAHN 707
D GI N
Sbjct: 697 RDRCECEASIGIGSN 711
>UniRef50_P12689 Cluster: DNA repair protein REV1; n=2;
Saccharomyces cerevisiae|Rep: DNA repair protein REV1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 985
Score = 41.9 bits (94), Expect = 0.015
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Frame = +3
Query: 126 NMDDRNMESSCSTCNEIDGEHFKSIIHIDLDCFYAQVE-MVRNP-----ELRDVPLGIQQ 287
N+ D+ + + +I + I HID DCF+A V + R+ + + P+ +
Sbjct: 334 NLKDKFLNENIHKYTKITDKDTYIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCH 393
Query: 288 --KNIVVTS-NYEARNYGVSKCMLVTDALKVCPN-LKLVN 395
KN + S NY AR+YG+ M V+ A K+ PN +KL++
Sbjct: 394 GTKNSDIASCNYVARSYGIKNGMWVSQAEKMLPNGIKLIS 433
>UniRef50_A7REV5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 870
Score = 41.5 bits (93), Expect = 0.020
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +Y AR GV M + A K+CP++ V YR S +++ +L + +E
Sbjct: 360 IASCSYAARECGVRNGMFLGQARKLCPDITCVPYL-FDKYRQVSQRLYEILVSYSHDIEA 418
Query: 477 LGMDENFIDVT 509
+ DE F+DVT
Sbjct: 419 VSCDEAFLDVT 429
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 180 GEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKN 293
G + + I+HID+DCF+ V + +PEL P+ + + N
Sbjct: 280 GVYGRVIMHIDMDCFFVSVYVRDHPELDGKPVAVSRFN 317
>UniRef50_O48585 Cluster: T19K24.14 protein; n=1; Arabidopsis
thaliana|Rep: T19K24.14 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 955
Score = 41.1 bits (92), Expect = 0.026
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Frame = +3
Query: 195 SIIHIDL---------DCFYAQVEMVRNPELRDVPLGIQQKNI------VVTSNYEARNY 329
+IIHIDL DCF+ V + EL D P+ + + + ++NY AR Y
Sbjct: 313 TIIHIDLLFESVKYFQDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAY 372
Query: 330 GVSKCMLVTDALKVCPNLKLV 392
GV M V A +CP L +V
Sbjct: 373 GVKAGMFVRHAKDLCPQLVIV 393
>UniRef50_A3VPN3 Cluster: UMUC-like DNA-repair protein; n=4;
Alphaproteobacteria|Rep: UMUC-like DNA-repair protein -
Parvularcula bermudensis HTCC2503
Length = 418
Score = 40.7 bits (91), Expect = 0.035
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 201 IHIDLDCFYAQVEMVRNPELRDVPLGI-------QQKNIVVTSNYEARNYGVSKCMLVTD 359
+++D D F+A V P LR P+G+ Q V+ + EA+ GV M V +
Sbjct: 10 LYLDFDGFFASVMQQAMPHLRGKPVGVIPFDTASAQYTTVIACSKEAKARGVQNVMRVPE 69
Query: 360 ALKVCPNLKLV 392
A +CP++ LV
Sbjct: 70 ARAICPDIVLV 80
>UniRef50_A5DN15 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1098
Score = 40.7 bits (91), Expect = 0.035
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPEL--RDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTDA 362
I+H+D D F+ + +P L + P+ + + + V + NY AR +G+ V A
Sbjct: 407 ILHVDFDSFFVTASCLSHPNLDIKKQPIAVSHGTKTSDVASCNYVARLFGIRNGEWVGRA 466
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKV--FLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKN 536
+K CP L +V D +Y S ++ FL+ V + +DE +D T+ +
Sbjct: 467 MKKCPEL-IVIEYDFDAYERCSKELYNFLIDSKIFDSVFPVLIDEVLLDATTYCSNSFSD 525
Query: 537 ANLNDLI 557
+ +
Sbjct: 526 STFEQRV 532
>UniRef50_A5IXL3 Cluster: DNA-damage repair protein MucB; n=1;
Mycoplasma agalactiae|Rep: DNA-damage repair protein
MucB - Mycoplasma agalactiae
Length = 415
Score = 40.3 bits (90), Expect = 0.046
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGIQ---QKNIVVTSNYEARNYGVSKCMLVTDALK 368
I HID D ++ ++ L++ P+ + ++I + +YE +N G+ K
Sbjct: 7 IFHIDFDSYFVSAHRSKDHRLKNKPVAVSNGLSRSICSSISYELKNAGIKVGWPRFMIEK 66
Query: 369 VCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
P V + Y T S +F + + +E +DE ++DVT++ E K
Sbjct: 67 KAPETIFVE-PNFDLYYTTSNNIFDYIASNYTANIEVGSIDECWVDVTAIAEGK 119
>UniRef50_A5DE10 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 673
Score = 39.9 bits (89), Expect = 0.060
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 207 IDLDCFYAQVEMVR-NPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDALKVCPNL 383
+D++ F+AQVE R N + D + +Q ++ S Y AR YG+++ V A + CP++
Sbjct: 47 VDMNAFFAQVEQTRLNLSIDDPVVCVQWLTLIAVS-YAARKYGINRMDNVKSAREKCPDV 105
Query: 384 KLVN 395
L +
Sbjct: 106 ILAH 109
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 624 IASQIANEMRKKIYDELGYTTCAGIAHNK 710
I +Q+ ++RK IYDEL YTT GIA NK
Sbjct: 247 IGAQVLYKIRKLIYDELSYTTSGGIARNK 275
>UniRef50_A5Z8E0 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Eubacterium ventriosum ATCC 27560
Length = 428
Score = 39.5 bits (88), Expect = 0.080
Identities = 24/95 (25%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Frame = +3
Query: 255 ELRDVPL---GIQQKN--IVVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYR 419
++R++P G ++K IV+ + A+ +G+ + +AL+ CPN+ +V E + Y
Sbjct: 33 DIRNIPAIIGGDREKRHGIVLAKSISAKKFGIVTGEPIANALQKCPNILIVPPEHGY-YN 91
Query: 420 TASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEE 524
S K+ +L+ + +E++ +DE ++D + + E
Sbjct: 92 EQSHKLMNLLRTFTPDIEQVSVDECYMDFSGIQNE 126
>UniRef50_Q98R22 Cluster: DNA-DAMAGE REPAIR PROTEIN MUCB; n=1;
Mycoplasma pulmonis|Rep: DNA-DAMAGE REPAIR PROTEIN MUCB
- Mycoplasma pulmonis
Length = 425
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPEL--RDVPLGIQQKNIVVT-SNYEARNYGVSKCMLVTDA 362
K I H+D D ++ +L + + + K ++T ++YEA+ G+ M + A
Sbjct: 12 KVIFHLDADSYFVSAIRTIRKDLFGKSMVVAHNHKRAIITSASYEAKAKGIKVGMPLYKA 71
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVF-LVLQGWRCPVEKLGMDENFIDVTSLVEEK 527
+ PN+ +V Y S +F + + + ++ +DE FID + LV +K
Sbjct: 72 KLIDPNV-VVADYSFELYSNLSSNIFNFLYENYTKKIQIYSIDEFFIDASDLVVKK 126
>UniRef50_Q18S53 Cluster: UMUC-like DNA-repair protein; n=4;
Clostridiales|Rep: UMUC-like DNA-repair protein -
Desulfitobacterium hafniense (strain DCB-2)
Length = 417
Score = 39.1 bits (87), Expect = 0.11
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Frame = +3
Query: 192 KSII-HIDLDCFYAQVEMVR-----NP-ELRDVP--LG---IQQKNIVVTSNYEARNYGV 335
KSII HID++ Y E V +P +LR +P +G + + IV+ + A+ Y +
Sbjct: 3 KSIIFHIDVNSAYLSWEAVYRLQQGDPLDLRTIPSVVGGDPLTRHGIVLAKSIPAKEYAI 62
Query: 336 SKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSL 515
+ AL CP+L + L +R S + L+L+ + +++ +DE F+D T++
Sbjct: 63 KTGETLYSALAKCPDLIIARPNYL-LFRQCSEALSLILRDYSPLIQQFSVDEYFLDFTAM 121
>UniRef50_A0LGS2 Cluster: DNA-directed DNA polymerase; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: DNA-directed DNA
polymerase - Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB)
Length = 393
Score = 39.1 bits (87), Expect = 0.11
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +3
Query: 192 KSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQ---KNIVVTSNYEARNYGVSKCMLVTDA 362
+ I+H+D+ FYA +E +R PEL+ + + + + IV N A G+ + M + A
Sbjct: 3 RHIVHLDIPNFYAVLEELRRPELKKRSMVLAEPSARAIVQGINSNAGKEGIREGMPLAHA 62
Query: 363 LKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVT 509
++C + L DL YR ++ + VE F+D+T
Sbjct: 63 RRMCRRV-LAVAPDLRFYREEHQQILKEFGFFSPLVEGAWPGHYFVDLT 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,941,319
Number of Sequences: 1657284
Number of extensions: 13423888
Number of successful extensions: 37366
Number of sequences better than 10.0: 280
Number of HSP's better than 10.0 without gapping: 35414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37068
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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