Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0056
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 293 1e-78
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 274 1e-72
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 210 2e-53
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 169 3e-41
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 155 4e-37
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 112 4e-24
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 112 5e-24
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 112 5e-24
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 2e-23
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 102 4e-21
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 99 3e-20
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 95 6e-19
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 87 2e-16
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 85 7e-16
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 85 9e-16
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 81 1e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 4e-14
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 77 2e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 77 3e-13
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 76 6e-13
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 75 1e-12
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 73 3e-12
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 71 2e-11
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 70 4e-11
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 68 1e-10
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 62 1e-08
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 57 2e-07
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 56 4e-07
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 54 3e-06
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 52 8e-06
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 52 1e-05
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 1e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 51 2e-05
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 49 7e-05
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 48 1e-04
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 47 3e-04
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 47 3e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 46 5e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 46 5e-04
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 45 9e-04
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 44 0.002
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 44 0.003
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 44 0.003
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.004
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.005
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 43 0.005
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 42 0.008
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.011
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 40 0.025
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 40 0.025
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 40 0.045
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 40 0.045
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 39 0.059
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 39 0.059
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 39 0.078
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.078
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 38 0.10
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.14
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.14
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.14
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 36 0.41
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 0.55
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 34 2.2
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 33 3.9
UniRef50_UPI000065ED52 Cluster: Complement C5 precursor [Contain... 33 5.1
UniRef50_A3LYD9 Cluster: Hypothetical transcription factor; n=1;... 33 5.1
UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomon... 32 6.8
UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11; Ar... 32 6.8
UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 6.8
UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;... 32 6.8
UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_UPI0001597D68 Cluster: hypothetical protein RBAM_034800... 32 8.9
UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isof... 32 8.9
UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|R... 32 8.9
UniRef50_Q7UI79 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q6CPX1 Cluster: Similar to sp|Q03823 Saccharomyces cere... 32 8.9
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 293 bits (720), Expect = 1e-78
Identities = 133/160 (83%), Positives = 148/160 (92%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPS 160
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 274 bits (671), Expect = 1e-72
Identities = 125/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 210 bits (512), Expect = 2e-53
Identities = 103/160 (64%), Positives = 121/160 (75%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI---------------------- 98
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS
Sbjct: 99 --RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPS 136
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 169 bits (411), Expect = 3e-41
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +3
Query: 159 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 338
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 339 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 500
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 155 bits (377), Expect = 4e-37
Identities = 75/123 (60%), Positives = 90/123 (73%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FR P++FK +KELF+ E +YCGKKATL VGNV+P+ ++PEG + +
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHV 120
Query: 396 GDR 404
G R
Sbjct: 121 GYR 123
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 112 bits (270), Expect = 4e-24
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +3
Query: 36 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 212
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 213 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
+ + +F A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E++
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
GD G+ ARA G +A VIG P+ +T ++LPSG
Sbjct: 112 AGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSG 145
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 112 bits (269), Expect = 5e-24
Identities = 60/160 (37%), Positives = 88/160 (55%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
+ F FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+EEK
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GD G+LAR++G F V+ H+ T++KLPS K+L S
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSS 186
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 112 bits (269), Expect = 5e-24
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 212
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 213 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
V F D + L + PEG G + CG A ++ GN +P+ +PEG + N+E +
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQ 115
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
GD G+ ARA G +AT+I H D RT V+LPSG
Sbjct: 116 PGDGGKFARAPGCYATIIAH--DVGRTYVQLPSG 147
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 2e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +3
Query: 48 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 227
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 228 DPYKFKTRK 254
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 102 bits (245), Expect = 4e-21
Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 212
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 213 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
V D +F L A EG+Y GQ + G A E GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GD G+LAR +G++A V+G +T ++LPSG K +P+
Sbjct: 112 PGDGGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPN 150
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 99 bits (238), Expect = 3e-20
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58
Query: 216 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
V F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
D G+ R+SG +ATV+ H +A RT V +PSG K L
Sbjct: 113 PNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWL 149
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 95.5 bits (227), Expect = 6e-19
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 212
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 213 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
++ D KF + +GL GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKT 110
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 491
GD G+ AR++G + V+G D + VKL S
Sbjct: 111 RGDGGKFARSAGTYGVVVGKTGD--KVLVKLSS 141
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 87.0 bits (206), Expect = 2e-16
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +3
Query: 96 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 272
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ + A
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKED------DCMVPAS 65
Query: 273 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 452
EG+YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 66 EGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNH 125
Query: 453 NPDAKRTRVKLPSGAKKVLPS 515
+ T +K+PSG K + S
Sbjct: 126 RKETNETVIKIPSGKKLTVSS 146
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 85.4 bits (202), Expect = 7e-16
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 212
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 213 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
+ + F A EG+YTGQ V G A GN++P+ A+PEGT + N+E +
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIR 115
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 503
GD G+LAR+ G +A ++G + ++ ++LPSG K
Sbjct: 116 PGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVK 150
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 85.0 bits (201), Expect = 9e-16
Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Frame = +3
Query: 36 MGRV-IRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 209
MG+V + QR+G GS F S T + G K+ + D G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 210 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 389
VV + + + L AP G+ G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLEN 111
Query: 390 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
GD G+L RASG+FA ++ D + V+LPSG K L
Sbjct: 112 NPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTL 149
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 81.4 bits (192), Expect = 1e-14
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 209
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 210 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 389
A V F D A G G+ + G K+ +E GNV+ + +P+GTIVCN+E+
Sbjct: 58 AKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
Query: 390 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
GD G + +++G ATV H + VKLPSG
Sbjct: 113 HFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSG 145
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 4e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 173
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 77.4 bits (182), Expect = 2e-13
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 216 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
+ D T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESS 107
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 503
GD G R++G FA V+ H R +KLPSG+ +
Sbjct: 108 PGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMR 141
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 76.6 bits (180), Expect = 3e-13
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +3
Query: 51 RAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 230
+A R G + H K K R +D+ + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 231 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 410
K R LF +G+ G + + A ++VGN P+ +PEGT++ N+E K G G+
Sbjct: 100 GEK---RYILFA--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQ 154
Query: 411 LARASGNFATVIGHNPDAKRTRVKLPSG-AKKVL 509
+AR++G ++G + D K ++L SG +KVL
Sbjct: 155 MARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 75.8 bits (178), Expect = 6e-13
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Frame = +3
Query: 54 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 227
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 228 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 407
D K +AP+GL G V G +A ++VGN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 408 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
+LAR++G A ++G + K V+L SG +++
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLV 184
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 74.9 bits (176), Expect = 1e-12
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 212
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 213 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 392
+ F D L G G + G K+ + GNV+ V +P+GT VCN+E+
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKH 112
Query: 393 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
GD G + +++G ATV H +KLPSG
Sbjct: 113 YGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSG 144
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 73.3 bits (172), Expect = 3e-12
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Frame = +3
Query: 63 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 236
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 237 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 416
K + P G G + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 417 RASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
RA+G A +I + K +KLPSG +++
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLI 182
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 70.5 bits (165), Expect = 2e-11
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +3
Query: 51 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 227
R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 228 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 407
Y+ +AP G G + G ++ ++VGN +P+ +P T + N+E G G
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGG 178
Query: 408 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
+L R++G+ AT++ D V+LPSG ++++
Sbjct: 179 QLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLV 212
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 69.7 bits (163), Expect = 4e-11
Identities = 39/129 (30%), Positives = 70/129 (54%)
Frame = +3
Query: 123 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 302
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 303 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 482
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 483 LPSGAKKVL 509
L SG ++++
Sbjct: 176 LNSGEQRLV 184
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 67.7 bits (158), Expect = 1e-10
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Frame = +3
Query: 51 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 227
+ + + G++ H + G KL R +D+ + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 228 DPYKFKTRKELFIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCN 380
D K I PEGL G V GK ++ GN MP+ +PEGTIV N
Sbjct: 114 DG-----EKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHN 168
Query: 381 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
+E G G++ARA+G +A V+G + V++PSG +++
Sbjct: 169 IEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMI 211
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 61.7 bits (143), Expect = 1e-08
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 236
R G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 237 KFKTRKELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 413
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 414 ARASGNFATVIGHNPDAKRTRVKLPSG 494
AR++G++A ++G + K ++L SG
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSG 187
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 57.2 bits (132), Expect = 2e-07
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +3
Query: 93 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 266
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG-----ERRYIV 111
Query: 267 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 446
AP GL G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLV 171
Query: 447 GHNPDAKRTRVK 482
+ R++
Sbjct: 172 AKEGEYATLRMR 183
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 56.4 bits (130), Expect = 4e-07
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 233
R +G V V H R G K +R +D+A R VV+ I HDPGR A +A+V ++
Sbjct: 108 RNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQET 163
Query: 234 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEV---------------------GNVMPVG 350
K +A EG+ G V+ E GN +P+
Sbjct: 164 KKLS----YILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLH 219
Query: 351 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 220 MMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/92 (30%), Positives = 55/92 (59%)
Frame = -2
Query: 407 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 228
T++TH + +AHNGTL S R +I+N + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 227 AEVYNSQRCTSTRVMDYILNNSLDVSMTFSVI 132
AE +S+ + ++D + +++L+V++ + +
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAIPLAEV 98
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 53.6 bits (123), Expect = 3e-06
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 233
R+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 234 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 413
K PEG+ G + G A VGN P MP GT++ +E G G+
Sbjct: 100 -----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQS 154
Query: 414 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 512
ARA+G A + + +R LP G + +P
Sbjct: 155 ARAAGAPAKPVAKEGQSATSR--LPPGEVRSIP 185
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 52.0 bits (119), Expect = 8e-06
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 264 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 443
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 444 I-GHNPDAKRTRVKLPSGAKKVLP 512
I HN K ++LPSG K P
Sbjct: 259 IKKHN---KYAILRLPSGELKSFP 279
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 51.6 bits (118), Expect = 1e-05
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Frame = +3
Query: 63 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 242
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 243 KTRKELFIAPEGLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 419
K I L FV K +L GN + + GT++ +E G +R
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSR 131
Query: 420 ASGNFATVIGHNPDAKRTRVKLPSGAKK 503
+SG+ + +I D K +KLPSG KK
Sbjct: 132 SSGSESEII--FKDNKFGVIKLPSGIKK 157
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +3
Query: 327 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 506
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 507 LPS 515
+ S
Sbjct: 419 IDS 421
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +3
Query: 321 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 48.8 bits (111), Expect = 7e-05
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 233
R G V V H R G K +R +D+A R +V+ I HDPGR A +A+V ++
Sbjct: 107 RNNTGRVTVRH---RGGGHKRRIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQET 162
Query: 234 YKFK-------------TRKELFIAPEGLYT--GQFVYCGKKA--TLEVGNVMPVGAMPE 362
K + + PE L+ G V G A T GN +P+ +P
Sbjct: 163 QKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPV 222
Query: 363 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 467
GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 223 GTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 255 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 365
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 48.0 bits (109), Expect = 1e-04
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 227
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 228 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 398
+ + T +AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +3
Query: 324 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 503
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 504 VLPS 515
+ S
Sbjct: 353 AVDS 356
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.8 bits (106), Expect = 3e-04
Identities = 35/109 (32%), Positives = 55/109 (50%)
Frame = +3
Query: 165 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 344
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 345 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 491
+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 46.0 bits (104), Expect = 5e-04
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Frame = +3
Query: 54 AQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF-- 224
A R G + + H + A +L R +D+ +R+ + G V+ I +DP R + +A+V +
Sbjct: 23 AGRNSTGRITLFH--RGSHAKRLQRRIDF-QRNTSLTGKVERIEYDPNRSSWIALVRWYS 79
Query: 225 --RDPYK--FKTRKELFIAPEGLYTGQFVYCGKKA--TLE--VGNVMPVGAMPEGTIVCN 380
P TR +A + TG V + LE +GN + + +P GT++ N
Sbjct: 80 GSTQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHN 139
Query: 381 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 497
+E G + RA+G FA +I R++LPSGA
Sbjct: 140 IEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGA 176
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 46.0 bits (104), Expect = 5e-04
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 327 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 506
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 507 LPS 515
+ S
Sbjct: 381 IDS 383
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 45.2 bits (102), Expect = 9e-04
Identities = 33/124 (26%), Positives = 59/124 (47%)
Frame = +3
Query: 123 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 302
R +DY I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 303 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 482
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 483 LPSG 494
L SG
Sbjct: 157 LKSG 160
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 327 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 503
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTK 71
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 318 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSG 292
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 324 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 503
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 504 VLPS 515
++ S
Sbjct: 417 LIDS 420
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 43.2 bits (97), Expect = 0.004
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 165 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 344
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 345 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 491
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRK 107
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 42.7 bits (96), Expect = 0.005
Identities = 36/112 (32%), Positives = 56/112 (50%)
Frame = +3
Query: 174 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 353
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 354 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
+ G+ + N+E + +G L + + N +I D T VKLPSG K+L
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLL 175
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 41.9 bits (94), Expect = 0.008
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGA--PKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 230
+ G +V+ T +R+G KL R +D+ + V + +DP R A LA++ + +
Sbjct: 39 KTGGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYEN 98
Query: 231 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGAMPEGTIVCNLEEKMGD 401
K IAP GL G + KATL GN P+ +P T + +E G
Sbjct: 99 G-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPSTKLHCVELVPGK 153
Query: 402 RGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
+L R +G ++ + ++K+PSG
Sbjct: 154 GAQLGRTAGTSIELVA--VENGYAQLKMPSG 182
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 41.5 bits (93), Expect = 0.011
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -2
Query: 407 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 228
T +TH + +AHNGTL S R +I+N + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 227 AE 222
AE
Sbjct: 79 AE 80
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 40.3 bits (90), Expect = 0.025
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +3
Query: 168 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 332
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 333 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 446
+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 40.3 bits (90), Expect = 0.025
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 90 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 269
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 270 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 434
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 435 ATVI 446
++
Sbjct: 214 GVLL 217
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 39.5 bits (88), Expect = 0.045
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 168 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 344
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 345 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 446
+GA+P GT+V NLE + G RA+G ++
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 39.5 bits (88), Expect = 0.045
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +3
Query: 354 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLI 52
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 39.1 bits (87), Expect = 0.059
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Frame = +3
Query: 60 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP- 233
R G + V H K +G KL R +D+ I VV+ + +DP R + +V++++
Sbjct: 41 RDNQGHITVYH--KERGHKKLYRLVDFYYLKD-IPYVVESLEYDPNRSGFINLVYYKNGI 97
Query: 234 YKFKTRKELFIAPEGLYTGQFVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEEKMGDRG 407
Y F +A + G C K L+ GN +P G+IV N+ ++
Sbjct: 98 YSF------ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKA 151
Query: 408 RLARASGNFATVIGHNPDAKRTRVKLPS 491
+ R++G F ++ + VKLPS
Sbjct: 152 KYLRSAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 39.1 bits (87), Expect = 0.059
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 321 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 500
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 501 KVL 509
+ +
Sbjct: 280 RYI 282
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 38.7 bits (86), Expect = 0.078
Identities = 32/127 (25%), Positives = 59/127 (46%)
Frame = +3
Query: 123 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 302
R +D+ I G+V+ I +DP R A +A++ + D K K + E + + +
Sbjct: 37 RIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKTNELEVSDKIIS 92
Query: 303 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 482
L+ GN + + GT++ E +G +R++G+ + +I N + +K
Sbjct: 93 SLNNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GIIK 150
Query: 483 LPSGAKK 503
L SG KK
Sbjct: 151 LSSGIKK 157
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.078
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 330 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 38.3 bits (85), Expect = 0.10
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +3
Query: 159 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEVGN 335
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 336 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 494
+ + +P GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 37.9 bits (84), Expect = 0.14
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = -2
Query: 512 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHI 333
W NLL R L IR+V++ + ++ + TSIT+ +F + GT + ++
Sbjct: 75 WNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRAQGQNV 134
Query: 332 SNFKSCFLSTINKLACVEPFGSNEELL 252
+ FL+ N+LA V ++ +
Sbjct: 135 IGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 330 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 446
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.14
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 309 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 452
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 36.3 bits (80), Expect = 0.41
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +3
Query: 288 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 467
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 468 RTRVKLPSGAKKVL 509
+KLPSG ++L
Sbjct: 167 YVTIKLPSGEIRLL 180
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 0.55
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 330 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 488
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 33.9 bits (74), Expect = 2.2
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Frame = +3
Query: 117 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTG-- 290
KL +D+ + + V + +DP R + +VH + + F+ R + +AP+G + G
Sbjct: 34 KLLKIDFFRKPSHNSFKVLNFFYDPNRSCKVIIVH--NVHTFQPR--IVLAPKGAFQGIN 89
Query: 291 QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR 470
F + + + +G + G+ V +++ + R++G+ V+ D
Sbjct: 90 LFDFTKENPSNSIGCSQFFHNINVGSYVYSIQSTPNSKMTFIRSAGSQGQVV--KKDHYF 147
Query: 471 TRVKLPSGAKKVLPS 515
T VK+PS K S
Sbjct: 148 TFVKIPSSEVKKFSS 162
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 375 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 509
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 33.1 bits (72), Expect = 3.9
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 309 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 488
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 489 S 491
S
Sbjct: 161 S 161
>UniRef50_UPI000065ED52 Cluster: Complement C5 precursor [Contains:
Complement C5 beta chain; Complement C5 alpha chain; C5a
anaphylatoxin; Complement C5 alpha' chain].; n=1;
Takifugu rubripes|Rep: Complement C5 precursor [Contains:
Complement C5 beta chain; Complement C5 alpha chain; C5a
anaphylatoxin; Complement C5 alpha' chain]. - Takifugu
rubripes
Length = 1281
Score = 32.7 bits (71), Expect = 5.1
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Frame = +3
Query: 186 DPGRGAPLAVVHFRDPYKFKTRKELFIAPEG----LYTG-----QFVYCGKKATLEVGNV 338
+PG V+ + K K+L + PEG L +G Q +Y +K T+E+ N
Sbjct: 819 EPGEHTLTFVLKTQHGQKDVVEKKLRVVPEGIKRELLSGGRLDPQGLYGSQKITVELKNT 878
Query: 339 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 497
+P +P T+V E + G + + T + H+PD R V LP+G+
Sbjct: 879 LPSNMVPN-TVV---ERMLTINGEVL----DDITSVVHSPDGLRQLVNLPAGS 923
>UniRef50_A3LYD9 Cluster: Hypothetical transcription factor; n=1;
Pichia stipitis|Rep: Hypothetical transcription factor -
Pichia stipitis (Yeast)
Length = 756
Score = 32.7 bits (71), Expect = 5.1
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = -2
Query: 434 EVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSN--E 261
E S T S+ H L K + SSN +H+S KS F + +N V G N
Sbjct: 453 ENSHSTKNAHSVDHSLVKNRELDQVSSSSNSNHLSLKKSAFSNWLNNPNQVHTVGGNPSA 512
Query: 260 ELLPCLELVWIAEV-YNSQRCTSTRVMDYILNNSLD 156
L+P L+ ++ YNS S + NNS+D
Sbjct: 513 NLIPLSPLLNDSDTEYNSSNTAS------LNNNSID 542
>UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Conserved domain protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 279
Score = 32.3 bits (70), Expect = 6.8
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 102 RKGAPKLRSLDYAERHGYIKGVVKDIIH---DPGRGAPLAVVHFRDPYKFKTRKELFIAP 272
R AP+ AE G GV D +H DPG A + H R + R + P
Sbjct: 33 RAAAPRQADRTIAEIAGRSGGVYSDDLHAARDPGASAAFRLAHKRRLEALRMRGVVTRRP 92
Query: 273 EGLYTGQFVYCGKKATLE 326
+G + Y + ATLE
Sbjct: 93 DGTWDVPADYLERAATLE 110
>UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11;
Arabidopsis thaliana|Rep: DC1 domain-containing protein
- Arabidopsis thaliana (Mouse-ear cress)
Length = 692
Score = 32.3 bits (70), Expect = 6.8
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 386 FKIAHNGTLRHSSNRH-HISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 228
FK + T+ H S+RH H+S K S+ K AC P GS+ L C E +I
Sbjct: 363 FKRNDDNTIDHFSHRHNHMSLDKGGEESSFCK-ACAHPIGSSSSLYKCSECSFI 415
>UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep:
MAP4K1 protein - Bos taurus (Bovine)
Length = 847
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 96 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 233
KKR A K+ + + G +G++ D++ +PG+GAP+ + DP
Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335
>UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;
n=1; Babesia bovis|Rep: Mac/perforin domain containing
protein - Babesia bovis
Length = 752
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 177 IIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATL 323
I+ DPG A + +H+RD + + FI P+G + + C K T+
Sbjct: 442 ILLDPGYRASVVQMHWRDDAEGLSNSRHFIQPKGAWVRPYTSCHKGETI 490
>UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 348
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 442 TVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVA 314
+VA PEA A P SP+FS R+ P P TFP S+++
Sbjct: 3 SVAYEPEALAFDP-SPLFSQRVQRWEPGASKPNPDTFPFSKIS 44
>UniRef50_UPI0001597D68 Cluster: hypothetical protein RBAM_034800;
n=1; Bacillus amyloliquefaciens FZB42|Rep: hypothetical
protein RBAM_034800 - Bacillus amyloliquefaciens FZB42
Length = 319
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -2
Query: 404 SITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 228
SITH +F I G + +H+ + K L + C+E ELL C + I
Sbjct: 188 SITHTIFYITDMGCSSLTDKEYHLPSLKEKVLKFLGIYICLENLDITSELLMCSSFLHI 246
>UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isoform
N2-A; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to titin isoform N2-A - Strongylocentrotus
purpuratus
Length = 10984
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 339 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 473
+P+ P T+ ++EK D GR +AS + + N DA+RT
Sbjct: 8790 VPISGTPTPTVAWLMDEKQVDDGRRIKASTTTYSAVLTNKDARRT 8834
>UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|Rep:
DNA gyrase subunit A - Leptospira interrogans
Length = 834
Score = 31.9 bits (69), Expect = 8.9
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR- 470
+V C K +GN P G + + ++ R L GNF ++ G NP A R
Sbjct: 87 YVKCAKIVGEVIGNYHPHGDASVYEALVRMVQEFSLRVPLIDGQGNFGSIDGDNPAAYRY 146
Query: 471 TRVKLPSGAKKVL 509
T +L A+++L
Sbjct: 147 TEARLEKVAEELL 159
>UniRef50_Q7UI79 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 463
Score = 31.9 bits (69), Expect = 8.9
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = -3
Query: 454 LCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVAFFPQ*TNWPV*-- 281
L V P AR L+ F++ L ++ SG A T + PT + P TN PV
Sbjct: 16 LSEFAVQSQPTPHARLCLA-WFATGLVALLISGCA-TPVASPTKSLTSKPVPTNSPVHQI 73
Query: 280 --SPSGAMKSSFLVLNLYGSRKCTT 212
+P+GA K + V +LYGS T+
Sbjct: 74 AQAPTGAAKPALDVASLYGSTSVTS 98
>UniRef50_Q6CPX1 Cluster: Similar to sp|Q03823 Saccharomyces
cerevisiae YMR160w singleton; n=1; Kluyveromyces
lactis|Rep: Similar to sp|Q03823 Saccharomyces
cerevisiae YMR160w singleton - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 716
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -3
Query: 499 LAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIAPT 344
L DG ++ S CP+ ++K+P R+ S I +++ T++P G++PT
Sbjct: 107 LDSDGVLSVYNTGSATCPLPLSKYPLLPQRK--STIINAKNSTIIP-GVSPT 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,437,990
Number of Sequences: 1657284
Number of extensions: 11411015
Number of successful extensions: 30936
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 30054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30919
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -