Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0042
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    45   0.002
UniRef50_Q239P6 Cluster: TPR Domain containing protein; n=2; Tet...    33   5.7  
UniRef50_Q6CCR0 Cluster: Yarrowia lipolytica chromosome C of str...    33   7.5  
UniRef50_Q96T83 Cluster: Sodium/hydrogen exchanger 7 (Na(+)/H(+)...    32   9.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -2

Query: 357 FLLLRWMDEPTAHLASSGYWSP 292
           FLLLRW+DE TAHL  SGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175



 Score = 33.5 bits (73), Expect = 4.3
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 295 PIDIYNVNAPPTSRYKF 245
           P  +Y+VNAPPTSRYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_Q239P6 Cluster: TPR Domain containing protein; n=2;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 501

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 18  YFKHSNKEDNLSSIAAFIVQNKFSDDLEQDLMSRKIYIY 134
           YFK + +E NL  IA     ++  DD +QD+MS   +IY
Sbjct: 140 YFKTNREEGNLQCIADLEKAHELLDDYKQDIMSFLTWIY 178


>UniRef50_Q6CCR0 Cluster: Yarrowia lipolytica chromosome C of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome C of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 508

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +2

Query: 113 VKKNIYIQSTTLVNSNLR*LEPLYSNNAFRFEGWGSRCS-YTEILELISR-GGWRIYVVD 286
           +KKN YI    + N+     +   S       GWG+    + E L++IS   GW ++V+D
Sbjct: 72  IKKNTYINDFHITNTEQPAYDSSSSRTLVMLHGWGTGMGLWFENLDVISSLPGWNVHVLD 131

Query: 287 VYGL 298
             G+
Sbjct: 132 NPGM 135


>UniRef50_Q96T83 Cluster: Sodium/hydrogen exchanger 7 (Na(+)/H(+)
           exchanger 7); n=32; Euteleostomi|Rep: Sodium/hydrogen
           exchanger 7 (Na(+)/H(+) exchanger 7) - Homo sapiens
           (Human)
          Length = 725

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
 Frame = -3

Query: 566 FVTIIRPLSLCIFELS---SVGRR*VRINASFCYIAMIFSFELSSA*KCIDLVRNIKRFC 396
           FV I    +  I+ LS   ++GRR  +I  +F ++ M+FS  L  A      +R+   + 
Sbjct: 449 FVAIFLGRAAHIYPLSFFLNLGRR-HKIGWNFQHM-MMFS-GLRGAMAFALAIRDTASYA 505

Query: 395 RELVITLNFFILFF--YCLGGWTSPQPTWRQVVTG 297
           R+++ T    I+FF  + +GG T+P  +W  +  G
Sbjct: 506 RQMMFTTTLLIVFFTVWIIGGGTTPMLSWLNIRVG 540


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,935,423
Number of Sequences: 1657284
Number of extensions: 12081702
Number of successful extensions: 27660
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27656
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)