Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0005
(643 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P31150 Cluster: Rab GDP dissociation inhibitor alpha; n... 239 5e-62
UniRef50_A7Q683 Cluster: Chromosome undetermined scaffold_55, wh... 181 1e-44
UniRef50_UPI00015552EE Cluster: PREDICTED: similar to Rab GDP di... 179 5e-44
UniRef50_A0CDI7 Cluster: Chromosome undetermined scaffold_17, wh... 173 3e-42
UniRef50_Q4E3K7 Cluster: RAB GDP dissociation inhibitor alpha, p... 163 3e-39
UniRef50_A6SLT8 Cluster: Secretory pathway Rab GDP dissociation ... 163 4e-39
UniRef50_Q5KEK9 Cluster: RAB GDP-dissociation inhibitor, putativ... 162 6e-39
UniRef50_A7R7J0 Cluster: Chromosome undetermined scaffold_1814, ... 153 5e-36
UniRef50_A2G9W5 Cluster: GDP dissociation inhibitor family prote... 145 9e-34
UniRef50_Q00SF8 Cluster: GDP dissociation inhibitor-common tobac... 133 4e-30
UniRef50_Q9GU77 Cluster: GDI; n=2; Giardia intestinalis|Rep: GDI... 107 2e-22
UniRef50_Q8SSD5 Cluster: SECRETORY PATHWAY GDP DISSOCIATION INHI... 73 4e-12
UniRef50_Q5C170 Cluster: SJCHGC02256 protein; n=1; Schistosoma j... 72 1e-11
UniRef50_Q189C6 Cluster: Putative signaling protein; n=1; Clostr... 37 0.48
UniRef50_Q23DM5 Cluster: Protein kinase domain containing protei... 35 1.5
UniRef50_A3KFG6 Cluster: PstD protein; n=1; Actinoplanes friulie... 33 7.7
UniRef50_Q6C3D2 Cluster: Yarrowia lipolytica chromosome F of str... 33 7.7
UniRef50_A6SCR7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.7
>UniRef50_P31150 Cluster: Rab GDP dissociation inhibitor alpha;
n=188; Eukaryota|Rep: Rab GDP dissociation inhibitor
alpha - Homo sapiens (Human)
Length = 447
Score = 239 bits (584), Expect = 5e-62
Identities = 110/169 (65%), Positives = 128/169 (75%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQV 182
GV+S E A+CKQ+ CDPSY+PDRVRK GQVIR IC+L HPI NT DA S QIIIPQ QV
Sbjct: 267 GVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQV 326
Query: 183 ERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDY 362
R SDIYV ++SY H VAA+G +IA+ STTVET DPE E+ P L LL I QKFV+++D
Sbjct: 327 NRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELLEPIDQKFVAISDL 386
Query: 363 YEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVK 509
YEPIDDG +SQ+F S SYDATTHFETTC D+ IYK G FDF +K
Sbjct: 387 YEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDFENMK 435
>UniRef50_A7Q683 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 250
Score = 181 bits (441), Expect = 1e-44
Identities = 84/166 (50%), Positives = 114/166 (68%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQV 182
GV S ETAKCK+V CDPSY+PD+V+K G+V R IC++ H I +T D+ S Q+I+PQKQ+
Sbjct: 73 GVTSEGETAKCKKVVCDPSYLPDKVQKVGKVARAICIMSHSIPDTNDSHSVQVILPQKQL 132
Query: 183 ERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDY 362
R SD+Y+ SY+H VA KG +IA V+T ET+ PE E++ G+ LLG + + F D
Sbjct: 133 GRKSDMYLFCCSYSHNVAPKGKYIAFVTTEAETDQPEVELKRGVDLLGPVDEIFYETYDR 192
Query: 363 YEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFS 500
+EP +D FIS SYDATTHFE+T +V+ +Y TGEE D +
Sbjct: 193 FEPKNDHEVDHCFISTSYDATTHFESTVKNVIAMYSKITGEELDLT 238
>UniRef50_UPI00015552EE Cluster: PREDICTED: similar to Rab GDP
dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1), partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Rab GDP dissociation inhibitor alpha (Rab GDI alpha)
(Guanosine diphosphate dissociation inhibitor 1)
(GDI-1), partial - Ornithorhynchus anatinus
Length = 562
Score = 179 bits (436), Expect = 5e-44
Identities = 87/136 (63%), Positives = 103/136 (75%), Gaps = 5/136 (3%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQV 182
GV+S E A+CKQ+ CDPSYVPDRVRK GQVIR IC+L HPI NT DA S QIIIPQ QV
Sbjct: 385 GVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRVICILSHPIKNTNDANSCQIIIPQNQV 444
Query: 183 ERNS-----DIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFV 347
R S DIYV ++SY H VAA+G +IA+VSTTVET +PE EI P L LL I QKFV
Sbjct: 445 NRKSGGQCRDIYVCMISYAHNVAAQGKYIAIVSTTVETAEPEKEIEPALELLEPIDQKFV 504
Query: 348 SVTDYYEPIDDGSQSQ 395
+++D +EP +DGS+SQ
Sbjct: 505 AISDLFEPTEDGSESQ 520
>UniRef50_A0CDI7 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 469
Score = 173 bits (421), Expect = 3e-42
Identities = 81/178 (45%), Positives = 117/178 (65%), Gaps = 5/178 (2%)
Frame = +3
Query: 15 GNETAKCKQVYCDPSY-----VPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQ 179
G E CK + DPSY + ++V+ G+++RCIC+L+HPI NTK+ S Q+IIPQ+Q
Sbjct: 294 GIEQINCKMIIADPSYALKAKLSNKVKSIGKIVRCICILNHPIPNTKNLPSVQVIIPQRQ 353
Query: 180 VERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTD 359
R +DIYV +VS H V KG+FIA++ST VETN+PE E+ P ++G + +KFV+V+D
Sbjct: 354 TGRKNDIYVMMVSDVHNVCKKGFFIAILSTNVETNNPEKELEPAFEIVGPVLEKFVTVSD 413
Query: 360 YYEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLELGEEDQ 533
Y P DDGS+ I+IS S+D +HFE VL Y+ TG + D + L + ++DQ
Sbjct: 414 VYVPTDDGSKDNIYISSSFDPQSHFEGETQQVLNAYRKITGNDLDLT--NLPVDQDDQ 469
>UniRef50_Q4E3K7 Cluster: RAB GDP dissociation inhibitor alpha,
putative; n=4; Trypanosomatidae|Rep: RAB GDP
dissociation inhibitor alpha, putative - Trypanosoma
cruzi
Length = 445
Score = 163 bits (396), Expect = 3e-39
Identities = 76/174 (43%), Positives = 119/174 (68%), Gaps = 2/174 (1%)
Frame = +3
Query: 6 VRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTK-DALSTQIIIPQKQV 182
+ S + A K + DPSY PDRV+ G+V+RCI +++HPI N K D S QIIIPQK++
Sbjct: 268 IESNGKKAYAKLIVGDPSYFPDRVKNCGKVVRCIAIMNHPIPNLKVDCNSCQIIIPQKEL 327
Query: 183 ERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVET-NDPESEIRPGLALLGAIRQKFVSVTD 359
+RN+D+Y+ + ++V +G++IA++ T VE +PE +I PGL ++G + F+SV+D
Sbjct: 328 KRNNDMYILQLGANNKVCPEGYYIAIIGTVVENVENPEMDILPGLRVIGDTLETFISVSD 387
Query: 360 YYEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLELG 521
YEP++DG S+ FIS SYDA THFE+ ++L++++ G+ DF +K +LG
Sbjct: 388 LYEPMEDGKVSRCFISNSYDAATHFESAAANILELFQRIHGKPCDFESMK-QLG 440
>UniRef50_A6SLT8 Cluster: Secretory pathway Rab GDP dissociation
inhibitor; n=2; Sclerotiniaceae|Rep: Secretory pathway
Rab GDP dissociation inhibitor - Botryotinia fuckeliana
B05.10
Length = 471
Score = 163 bits (395), Expect = 4e-39
Identities = 78/159 (49%), Positives = 109/159 (68%), Gaps = 2/159 (1%)
Frame = +3
Query: 18 NETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQVERNSD 197
N K K++ DPSY PD+VR GQ+++ IC+L+HP++ T +A S Q+IIPQ QV R +D
Sbjct: 296 NFETKTKKIIADPSYFPDKVRVVGQLLKAICILNHPLAGTDNADSAQLIIPQSQVGRKND 355
Query: 198 IYVSVVSYTHQVAAKGWFIAMVSTTVET-NDPESEIRPGLALLGAIRQKFVS-VTDYYEP 371
IY++VVS H V KG++IA+VST ET ++ E+ PGL LG I +KF+ YEP
Sbjct: 356 IYIAVVSSAHSVCPKGYYIAIVSTIAETDSNHHLELAPGLERLGKIEEKFMGPPIPLYEP 415
Query: 372 IDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEE 488
++ G + +IFIS+SYDAT+HFETT DV IY+ G +
Sbjct: 416 LESGEKDRIFISKSYDATSHFETTTDDVKDIYRRAEGHD 454
>UniRef50_Q5KEK9 Cluster: RAB GDP-dissociation inhibitor, putative;
n=13; Eukaryota|Rep: RAB GDP-dissociation inhibitor,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 551
Score = 162 bits (394), Expect = 6e-39
Identities = 87/182 (47%), Positives = 116/182 (63%), Gaps = 10/182 (5%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYV------PD----RVRKKGQVIRCICLLDHPISNTKDALS 152
GV S ET + K+V DPSY P+ RV + G+VIR IC++ HPI T +A S
Sbjct: 368 GVTSEGETVRAKKVIGDPSYFGAGKDEPEGGKMRVIETGKVIRAICIMKHPIPGTDNADS 427
Query: 153 TQIIIPQKQVERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAI 332
QIIIPQKQV R +DIY++ VS H VAA +IA+VST VET+ PE EI PGL LLG +
Sbjct: 428 AQIIIPQKQVGRKNDIYIAAVSSAHNVAAPNVWIAIVSTIVETSVPEREILPGLQLLGNV 487
Query: 333 RQKFVSVTDYYEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKL 512
KF+S+T Y P DG+ +FI++SYDAT+HFET DV +++ GE+ K +
Sbjct: 488 VDKFISITPLYAPTADGTTDNVFITKSYDATSHFETVVEDVSDVWQRVKGEKLVLKKRET 547
Query: 513 EL 518
++
Sbjct: 548 QI 549
>UniRef50_A7R7J0 Cluster: Chromosome undetermined scaffold_1814,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1814, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 233
Score = 153 bits (370), Expect = 5e-36
Identities = 69/135 (51%), Positives = 93/135 (68%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQV 182
GV S ETAKCK+V CDPSY+PD+V G+V R IC++ HPI NT D+ S Q+I+PQKQ+
Sbjct: 92 GVTSEGETAKCKKVVCDPSYLPDKVGTVGKVARAICIMSHPIPNTSDSHSVQVILPQKQL 151
Query: 183 ERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDY 362
R SD+Y+ SY+H VA KG +IA V+T ET++PE E++PG+ LLG + + F D
Sbjct: 152 GRKSDMYLFCCSYSHNVAPKGKYIAFVTTEAETDNPEIELKPGIDLLGQVDEIFFDAYDR 211
Query: 363 YEPIDDGSQSQIFIS 407
YEP + + FIS
Sbjct: 212 YEPANKQDEDNCFIS 226
>UniRef50_A2G9W5 Cluster: GDP dissociation inhibitor family protein;
n=1; Trichomonas vaginalis G3|Rep: GDP dissociation
inhibitor family protein - Trichomonas vaginalis G3
Length = 439
Score = 145 bits (351), Expect = 9e-34
Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSY---VPDRVRKKGQVIRCICLLDH-PISNTKDALSTQIIIP 170
G+ SGNE A + DPSY +P + + GQ++R ICLL H P + S II+P
Sbjct: 266 GIISGNEKAYAPIIIGDPSYFADIPGKTKNVGQIVRAICLLHHCPDCMKGEVDSANIILP 325
Query: 171 QKQVERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVS 350
Q V R DIY+ SY +V KGW+IA+ ST+VET+ PE E+ P L L G I +
Sbjct: 326 QSSVGRKHDIYICYTSYQQKVCPKGWYIAIASTSVETDQPEKELDPALKLFGKIDYISLK 385
Query: 351 VTDYYEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLE 515
V D P GSQ + S SYD TTHFETT +VLK+Y+ G+ DF K K+E
Sbjct: 386 VHDVIVPAIPGSQDGCYCSSSYDPTTHFETTIDEVLKLYEEIMGKPVDFDK-KME 439
>UniRef50_Q00SF8 Cluster: GDP dissociation inhibitor-common tobacco;
n=1; Ostreococcus tauri|Rep: GDP dissociation
inhibitor-common tobacco - Ostreococcus tauri
Length = 432
Score = 133 bits (321), Expect = 4e-30
Identities = 75/167 (44%), Positives = 92/167 (55%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQV 182
GV+S ETAK K V DPSY P + + GQV+R +CLL HPI N DA S QIIIP Q
Sbjct: 276 GVKSEGETAKAKFVVGDPSYFPGKTKVMGQVVRALCLLSHPIPNVNDAESVQIIIPAAQC 335
Query: 183 ERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDY 362
R D+YV +H VA+ GL +LG I + F +V+D
Sbjct: 336 GRRHDVYVLGAGSSHNVAS--------------------FEVGLRMLGPIDELFYNVSDV 375
Query: 363 YEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSK 503
+ P+ DG FIS YDATTHFETT DV+ IYK TG++ D SK
Sbjct: 376 HHPLADGVADGAFISTGYDATTHFETTVRDVIDIYKRITGKDLDLSK 422
>UniRef50_Q9GU77 Cluster: GDI; n=2; Giardia intestinalis|Rep: GDI -
Giardia lamblia (Giardia intestinalis)
Length = 476
Score = 107 bits (258), Expect = 2e-22
Identities = 66/186 (35%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNT-------KDALST-- 155
GVR G+ V DPSY PD V KG+V R IC+L PI KD
Sbjct: 275 GVRFGDHEVSAPIVVGDPSYFPDLVVSKGRVGRAICILKGPIPECDQQSDVEKDGAGNRI 334
Query: 156 -----QIIIPQKQVERNSDIYVSVVSYTHQVAAKGWFIAMVSTTV--ETNDPESEIRPGL 314
Q+I+P Q++R SDIYVS Y H+ + + VS V +D E++ G
Sbjct: 335 VQTAHQVILPASQIQRKSDIYVSTQGYNHRTTPRNCVLGYVSGLVYGSRSDNRDELKAGF 394
Query: 315 ALL--GAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEE 488
+L I + F D EP ++ + IFIS+SYDAT+HFE+T + + +Y+ TGE
Sbjct: 395 DILKRAGISKTFYKEYDLLEPKEEAQRRNIFISKSYDATSHFESTVAESIDMYQRITGET 454
Query: 489 FDFSKV 506
D + +
Sbjct: 455 LDLTTI 460
>UniRef50_Q8SSD5 Cluster: SECRETORY PATHWAY GDP DISSOCIATION
INHIBITOR ALPHA; n=1; Encephalitozoon cuniculi|Rep:
SECRETORY PATHWAY GDP DISSOCIATION INHIBITOR ALPHA -
Encephalitozoon cuniculi
Length = 429
Score = 73.3 bits (172), Expect = 4e-12
Identities = 42/117 (35%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +3
Query: 90 QVIRCICLL-DHPISNTKDALSTQIIIPQKQVERNSDIYVSVVSYTHQVAAKGWFIAMVS 266
++IR IC++ P+ T+ A S QII +++++R +DI+V V+ + +G+ +A++S
Sbjct: 299 EIIRGICIIRGDPVCVTRGASSAQIIFLKEELKRRNDIFVVVLGSEEKSTPEGYKVAIIS 358
Query: 267 TTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATTHFE 437
T ET+DPE+EI+ L LG I + FV V Y D +++ IF ++ D + HFE
Sbjct: 359 TVKETSDPENEIKVVLEKLGDIVRYFVDVKPVYRAED--TENVIF-TKGVDESPHFE 412
>UniRef50_Q5C170 Cluster: SJCHGC02256 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02256 protein - Schistosoma
japonicum (Blood fluke)
Length = 185
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/99 (41%), Positives = 56/99 (56%)
Frame = +3
Query: 3 GVRSGNETAKCKQVYCDPSYVPDRVRKKGQVIRCICLLDHPISNTKDALSTQIIIPQKQV 182
GV S + A+C +V CDPSY PDRV+K GQ IIIP QV
Sbjct: 109 GVMSEGKVARCGKVICDPSYAPDRVQKCGQ----------------------IIIPHNQV 146
Query: 183 ERNSDIYVSVVSYTHQVAAKGWFIAMVSTTVETNDPESE 299
R +DIY+S VS+ H V + +++ +V+TTVET++P E
Sbjct: 147 NRCNDIYISCVSHLHHVCPEKFYLVLVATTVETSNPHQE 185
>UniRef50_Q189C6 Cluster: Putative signaling protein; n=1;
Clostridium difficile 630|Rep: Putative signaling
protein - Clostridium difficile (strain 630)
Length = 392
Score = 36.7 bits (81), Expect = 0.48
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 596 NKQLN-NKQYTYYFFMRPLSYLLILFTKFQLDFREIKFF 483
NK + +K Y Y F ++PL++L+I+FTK L I F+
Sbjct: 30 NKNITIHKNYKYIFLIKPLTFLIIIFTKLPLPLYYILFY 68
>UniRef50_Q23DM5 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 643
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -3
Query: 563 YFFMRPLSYLLI--LFTKFQLDFREIKFFPSTMFINFKHIQTSCFKVCGGIIRFRNKYLA 390
Y F P+ Y ++ FQ+ RE FPS +K Q KV G F+ KY
Sbjct: 51 YIFQNPVQYSVLEEAIQYFQMHMRENHIFPSQD--EYKRFQDKLVKVIGSRPDFKEKYQF 108
Query: 389 LATIIDWLIIVSH*YKLLPN 330
+I D + + Y+L+ N
Sbjct: 109 EQSIRDCISVFIMEYQLMQN 128
>UniRef50_A3KFG6 Cluster: PstD protein; n=1; Actinoplanes
friuliensis|Rep: PstD protein - Actinoplanes friuliensis
Length = 2370
Score = 32.7 bits (71), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 86 GSGDTMHLSIRSSHF*HQGCTFHSDYNPSKT 178
G T+H ++R H H GC H+ Y P++T
Sbjct: 1784 GEALTLHPAVRRFHEQHPGCRLHNHYGPAET 1814
>UniRef50_Q6C3D2 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 250
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 333 RQKFVSVTDYYEPI-DDGSQSQIFISESYDATTHFETTCLDVLKIYKHG 476
++ ++VTDY P DGS++ +F SE+Y+ F+ DV + + G
Sbjct: 5 KRALIAVTDYNGPFYPDGSKTGLFFSEAYEPFEVFQKAGFDVQFVSEDG 53
>UniRef50_A6SCR7 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 915
Score = 32.7 bits (71), Expect = 7.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 318 LLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATTH 431
L G + + Y++PI DG QSQI++ ++ + TH
Sbjct: 53 LSGPSPTQLAQLQQYHQPIHDGDQSQIYMPQTPQSATH 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,965,762
Number of Sequences: 1657284
Number of extensions: 12706179
Number of successful extensions: 31961
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 30759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31904
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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