Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E01
(436 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 193 1e-48
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 183 2e-45
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 182 4e-45
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 143 1e-33
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 134 1e-30
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 129 2e-29
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 127 9e-29
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 126 3e-28
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 124 1e-27
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 122 4e-27
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 120 1e-26
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 120 1e-26
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 118 7e-26
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 109 2e-23
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 103 2e-21
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 102 3e-21
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 97 1e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 96 3e-19
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 95 4e-19
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 95 4e-19
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 91 7e-18
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 90 2e-17
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 89 4e-17
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 88 9e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 87 1e-16
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 87 2e-16
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 84 1e-15
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 84 1e-15
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 76 3e-13
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 60 2e-08
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 57 1e-07
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 54 1e-06
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 52 4e-06
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 43 0.003
UniRef50_UPI000049A0BB Cluster: hypothetical protein 6.t00033; n... 33 2.0
UniRef50_A0BJA3 Cluster: Chromosome undetermined scaffold_11, wh... 33 2.6
UniRef50_UPI0000F1F549 Cluster: PREDICTED: hypothetical protein,... 32 4.6
UniRef50_Q22S72 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 193 bits (471), Expect = 1e-48
Identities = 88/107 (82%), Positives = 102/107 (95%)
Frame = +2
Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 295
RG++V+ + E+PLVVSDK+QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 296 RRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGHL 436
RR+ RKGPLIIYNKD+GLTR+FRNIP ++M+NVN+LNLL LAPGGH+
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHV 111
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 183 bits (445), Expect = 2e-45
Identities = 81/145 (55%), Positives = 105/145 (72%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
FAPTK WRRWH ++GH +E++PELPLVV DKV+
Sbjct: 102 FAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGY 161
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAF 361
KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AF
Sbjct: 162 KKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAF 221
Query: 362 RNIPCIEMLNVNQLNLLKLAPGGHL 436
RNIP I +LNV++LN+LKLAPGGH+
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHV 246
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 182 bits (442), Expect = 4e-45
Identities = 81/145 (55%), Positives = 107/145 (73%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
FAPTK +RRWH Q++GH+++ + E PLVVSD+VQ++
Sbjct: 105 FAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKV 164
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAF 361
KTKQAVIFLRR+K W+D+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AF
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAF 224
Query: 362 RNIPCIEMLNVNQLNLLKLAPGGHL 436
RNIP IE +NV++LNLLKLAPGGH+
Sbjct: 225 RNIPGIETINVDKLNLLKLAPGGHV 249
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 143 bits (347), Expect = 1e-33
Identities = 67/139 (48%), Positives = 91/139 (65%)
Frame = +2
Query: 20 WRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQA 199
WRRWH ARGH VE +PE+PLVV D I KT +A
Sbjct: 111 WRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKA 170
Query: 200 VIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPCI 379
V L+++ A++D+ KV S+ +R+GKGKMRNRR VQR+GPL++Y++D G+TRAFRNIP +
Sbjct: 171 VELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGV 230
Query: 380 EMLNVNQLNLLKLAPGGHL 436
E+ +V++L LL LAPGGH+
Sbjct: 231 ELCSVDRLGLLTLAPGGHV 249
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 134 bits (323), Expect = 1e-30
Identities = 65/145 (44%), Positives = 89/145 (61%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
++P K WRRWH ARGH ++ +PELPLVVSD V++I
Sbjct: 102 YSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQI 161
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAF 361
KTK+AV L +KA DV +S+R+R G GK RNRR QR+G LI++++++GL AF
Sbjct: 162 KKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAF 221
Query: 362 RNIPCIEMLNVNQLNLLKLAPGGHL 436
RNI +++ NV +LN+ LAPGGHL
Sbjct: 222 RNISGVDISNVXRLNIRDLAPGGHL 246
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 129 bits (312), Expect = 2e-29
Identities = 69/151 (45%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV--- 172
FAPTK WR+WH ARGH V +PE+PLV+S
Sbjct: 78 FAPTKVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFAD 137
Query: 173 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKD---K 343
I KT AV L+ + A +D K S++LRAGKGK+R RR QR+GPL+IYN D K
Sbjct: 138 AAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGK 197
Query: 344 GLTRAFRNIPCIEMLNVNQLNLLKLAPGGHL 436
L +AFRNIP +E +V +NLL+LAPGGHL
Sbjct: 198 ELVKAFRNIPGVETSSVYSMNLLQLAPGGHL 228
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 127 bits (307), Expect = 9e-29
Identities = 65/143 (45%), Positives = 87/143 (60%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
FAPTK +RRWH +RGH + +PE+PLVV D +Q
Sbjct: 101 FAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGY 160
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAF 361
KTK+A+ FL+ I A DV +V S+ +RAG+GKMRNRR V R+GP+++ +KG TRAF
Sbjct: 161 EKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAF 219
Query: 362 RNIPCIEMLNVNQLNLLKLAPGG 430
RNI +++ NV+ L LL LAPGG
Sbjct: 220 RNIFGLDLANVSALTLLHLAPGG 242
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 126 bits (303), Expect = 3e-28
Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = +2
Query: 113 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 292
ARGH +E +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 293 RRRVQRKGPLIIYNKDKG-LTRAFRNIPCIEMLNVNQLNLLKLAPGGHL 436
RR + RKGPLI+Y + L +AFRNIP +E+ NV++LNLLKLAPGGHL
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHL 110
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 124 bits (298), Expect = 1e-27
Identities = 60/144 (41%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Frame = +2
Query: 8 PTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINK 187
P K WRRWH ARGH + ++P++PLVV DK++ K
Sbjct: 105 PIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEK 164
Query: 188 TKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIY-NKDKGLTRAFR 364
T A+ FL+R A+ DV KV ++ +RAG K R ++ RKGPL++Y N++ L +AFR
Sbjct: 165 TTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFR 224
Query: 365 NIPCIEMLNVNQLNLLKLAPGGHL 436
N+P +E++NV +LNLL+LAPGG L
Sbjct: 225 NVPGVEVVNVTRLNLLQLAPGGQL 248
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 122 bits (293), Expect = 4e-27
Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQE- 178
FAPTK WR+WH ARGH + ++ E+PLV++ +V E
Sbjct: 101 FAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEG 160
Query: 179 --INKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYN---KDK 343
I +T A L+ + A DV KV S++LRAGKGK+R RR QR+GPL++Y+ K
Sbjct: 161 AKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGK 220
Query: 344 GLTRAFRNIPCIEMLNVNQLNLLKLAPGGHL 436
L RAFRN+P +E +V LNLL+LAPGGHL
Sbjct: 221 ELVRAFRNLPGVETCDVYSLNLLQLAPGGHL 251
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 120 bits (290), Expect = 1e-26
Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK-VQE 178
F+P K +R+W ARGH + +P++PLVV+ K +
Sbjct: 102 FSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISV 161
Query: 179 INKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIY-NKDKGLTR 355
I KTKQAV L++I A+SDVLKV S+ +RAG+GKMR R+ +RKGPL++Y N D +
Sbjct: 162 IKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVK 221
Query: 356 AFRNIPCIEMLNVNQLNLLKLAPGGHL 436
AFRNIP ++ V L++L LAPG H+
Sbjct: 222 AFRNIPGVDTCRVENLSVLNLAPGCHI 248
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 120 bits (290), Expect = 1e-26
Identities = 61/145 (42%), Positives = 83/145 (57%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
F PTK WRRW ARGH + + E+PLV S+ ++ +
Sbjct: 102 FNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESM 161
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAF 361
KTK A+ FL + +V ++ KS +LRA GKMRNR+ GPLIIY+ D G+ +AF
Sbjct: 162 QKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAF 221
Query: 362 RNIPCIEMLNVNQLNLLKLAPGGHL 436
RNIP +++ NV +LNLLKLAPGG +
Sbjct: 222 RNIPGVDLCNVTKLNLLKLAPGGSI 246
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 118 bits (283), Expect = 7e-26
Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
F+P K +RR+H ARGH + +PELPLV+S+++Q I
Sbjct: 103 FSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNI 162
Query: 182 NKTKQAVIFLRRI-KAWSDVLK-VYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTR 355
NKT AV F + K + +K + S +R GKGKMRNRRRV GPL++Y +D G+ +
Sbjct: 163 NKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVK 222
Query: 356 AFRNIPCIEMLNVNQLNLLKLAPGG 430
A RNI ++ +V +LNLL+LAPGG
Sbjct: 223 AMRNIKGVDTCSVERLNLLRLAPGG 247
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 109 bits (262), Expect = 2e-23
Identities = 50/109 (45%), Positives = 73/109 (66%)
Frame = +2
Query: 110 QARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMR 289
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + DV +V R+ KGK R
Sbjct: 135 QARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFR 194
Query: 290 NRRRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGHL 436
+KGPL+IYN+DKG+ +AFRNIP +E ++V L L KLAP +
Sbjct: 195 RAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQV 243
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 103 bits (247), Expect = 2e-21
Identities = 47/108 (43%), Positives = 72/108 (66%)
Frame = +2
Query: 110 QARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMR 289
+ARGH + +P +PLVV + KTK A+ ++ + DV + S+ +RAG+GKMR
Sbjct: 128 EARGHRIADVPSIPLVVD--TDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMR 185
Query: 290 NRRRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGH 433
NRR + RKGPL+IYN + + R FRN+P +++ +V+ + LL+LAPG H
Sbjct: 186 NRRYITRKGPLVIYNTE-DVARGFRNLPGVDLCHVSSIRLLELAPGSH 232
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 102 bits (245), Expect = 3e-21
Identities = 53/141 (37%), Positives = 78/141 (55%)
Frame = +2
Query: 8 PTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINK 187
PTK RRW +ARGH + + LP++VSD + + K
Sbjct: 101 PTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARK 160
Query: 188 TKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRN 367
TK AV LR + ++ +V KS+ +R GKGKMRNRR QRKG LI++ + + FRN
Sbjct: 161 TKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRN 219
Query: 368 IPCIEMLNVNQLNLLKLAPGG 430
I ++ ++++ L+LL+LAPGG
Sbjct: 220 IRGVDQMSIDSLDLLELAPGG 240
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 97.5 bits (232), Expect = 1e-19
Identities = 46/94 (48%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +2
Query: 158 VSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIY-N 334
V DK++ KTK A+ FL+R A+ DV KV ++ +RAG K R ++ RKGPL++Y N
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 335 KDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGHL 436
++ L +AFRN+P +E++NV +LNLL+LAPGG L
Sbjct: 61 ENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQL 94
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 95.9 bits (228), Expect = 3e-19
Identities = 52/145 (35%), Positives = 78/145 (53%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
F PT WR+WH +RG+ V+ IPE+P V+ D +++I
Sbjct: 97 FNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKI 156
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAF 361
KT+ + L + S V K ++L++GKGKMRNRR + GPL+++ K ++
Sbjct: 157 PKTRDLIKILTTLGINSIVRNKLK-RKLKSGKGKMRNRRFKKPTGPLLVF---KNNLKSL 212
Query: 362 RNIPCIEMLNVNQLNLLKLAPGGHL 436
RNI I+ + ++ LNL KLAPGGHL
Sbjct: 213 RNIANIDCMKISALNLTKLAPGGHL 237
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 95.5 bits (227), Expect = 4e-19
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +2
Query: 113 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 292
ARGH+VEK+P LP+VV ++IN+ K+A + W DV + + ++RAGKGKMR
Sbjct: 156 ARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRG 215
Query: 293 RRRVQRKGPLIIYNK-DKGLTRAFRNIPCIEMLNVNQLNLLKLAPGG 430
RR + K L++ + + L A RN P ++++ VN LN+L LAPGG
Sbjct: 216 RRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGG 262
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 95.5 bits (227), Expect = 4e-19
Identities = 40/106 (37%), Positives = 69/106 (65%)
Frame = +2
Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 295
RGH+++ +P LP+VV D+++ +NK ++ F + + W+DV + ++R+RAGKGK R R
Sbjct: 134 RGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGR 193
Query: 296 RRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGH 433
R V+ K LI+ ++D+G+ RN P ++++ L + LAPG H
Sbjct: 194 RYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAH 239
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 91.5 bits (217), Expect = 7e-18
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
+APT+ WRRWH +RGH +E + E+P+VV D +++I
Sbjct: 101 YAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQI 160
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKD--KGLTR 355
NKTK AV L I +++ ++ K G+ R+ R+ + GPLII +G R
Sbjct: 161 NKTKDAVKLLETIGLGAELKRIDKV------TGRARDGRKKRPVGPLIILRATAVEG-KR 213
Query: 356 AFRNIPCIEMLNVNQLNLLKLAPGGHL 436
AFRNIP +E+ V +LNLLKLAP G L
Sbjct: 214 AFRNIPGVEVACVERLNLLKLAPAGAL 240
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 90.2 bits (214), Expect = 2e-17
Identities = 38/64 (59%), Positives = 52/64 (81%)
Frame = +2
Query: 167 KVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKG 346
KV+ KTK+ V+ L+++KAW+D+ KVY SQR+RAGKGKMRNRR +QR+G IIYN+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 347 LTRA 358
+ +A
Sbjct: 158 IIKA 161
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 89.0 bits (211), Expect = 4e-17
Identities = 47/142 (33%), Positives = 74/142 (52%)
Frame = +2
Query: 8 PTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINK 187
P KP R+W + R H+ E ELP VVS++++ + +
Sbjct: 93 PPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFEG--ELPKVVSNELESVKR 150
Query: 188 TKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRN 367
TK R I ++DV + + +R RAG+GKMR RR V++K L++ KD G+ +A +N
Sbjct: 151 TKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKN 210
Query: 368 IPCIEMLNVNQLNLLKLAPGGH 433
+P ++ + V LN+ LAPG H
Sbjct: 211 LPGVDAVVVKDLNVELLAPGCH 232
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 87.8 bits (208), Expect = 9e-17
Identities = 42/105 (40%), Positives = 68/105 (64%)
Frame = +2
Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 295
RGH ++ +LP+VV D V+ INKTK A+ L+ + + D+ + + + +RAG+GKMR R
Sbjct: 131 RGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGR 190
Query: 296 RRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGG 430
R Q K LI+ + +AFR++P +++ + N L++ KLAPGG
Sbjct: 191 RYKQPKSVLIVARNSSAM-KAFRSLPGVDIASPNSLSIRKLAPGG 234
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 87.4 bits (207), Expect = 1e-16
Identities = 36/60 (60%), Positives = 51/60 (85%)
Frame = +2
Query: 113 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 292
++GH + ++PELPLVV DKV+ KT++AV+ L+++KAW+D+ KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 87.0 bits (206), Expect = 2e-16
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +2
Query: 2 FAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEI 181
FAPT+ WR WH +RGH VE +PELPLV+ D ++ +
Sbjct: 101 FAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETL 160
Query: 182 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKD--KGLTR 355
KT+ AV L + ++ +V ++R + KGK R GPL++ +G R
Sbjct: 161 TKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR------PVGPLVVMRSTAVEG-KR 212
Query: 356 AFRNIPCIEMLNVNQLNLLKLAPGGHL 436
AFRNIP +++++V +NLLKLAP G L
Sbjct: 213 AFRNIPGVDVMSVEHMNLLKLAPAGTL 239
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 84.2 bits (199), Expect = 1e-15
Identities = 39/109 (35%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +2
Query: 110 QARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMR 289
+ARGH+ + P+VV+D + + T + FL++I + DV +V + R+RAGKGKMR
Sbjct: 134 RARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMR 193
Query: 290 NRRRVQRKGPLII-YNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGH 433
R+ + GPLII ++ + + +A RN+ ++++N ++++ LAPG H
Sbjct: 194 GRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDVSVIHLAPGAH 242
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 84.2 bits (199), Expect = 1e-15
Identities = 33/108 (30%), Positives = 66/108 (61%)
Frame = +2
Query: 110 QARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMR 289
+ RGH V ++ ++P V+ D+++ + TK+ + + D+++ K +++++GKGK+R
Sbjct: 128 EQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLR 187
Query: 290 NRRRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGH 433
R+ KGPL++ D+G++ RN ++++ VN +N LAPG H
Sbjct: 188 GRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAELLAPGTH 235
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 76.2 bits (179), Expect = 3e-13
Identities = 44/107 (41%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +2
Query: 110 QARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMR 289
+ARGHI++K +P+VV D ++++ KTK+ L ++ ++ +VY+ +R RAGKGK R
Sbjct: 142 KARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRR 197
Query: 290 NRRRVQRKGPLIIYNK-DKGLTRAFRNIPCIEMLNVNQLNLLKLAPG 427
R ++RKGPLI+ N ++ L +A NIP +++ V LN+ LAPG
Sbjct: 198 GRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELLAPG 244
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 116 RGHIVEKIPELPLVVSDKV-QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 292
RGH LP+V+ V +I+ ++A L + + DVL+ + +R AGKGKMR
Sbjct: 142 RGHRFSA-ETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRG 200
Query: 293 RRRVQRKGPLIIYNKDKG-LTRAFRNIPCIEMLNVNQLNLLKLAPGGH 433
RR K L + + L A + +P ++++ L++L LAPGGH
Sbjct: 201 RRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGH 248
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 57.2 bits (132), Expect = 1e-07
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = +2
Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 295
RGHI++ I ELP+V+SD ++ ++K + L + ++DV ++ + ++ R GK +R R
Sbjct: 136 RGHIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSALRGR 193
Query: 296 RRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPG 427
+ K L + D + RA P + L++L LAPG
Sbjct: 194 PKKIGKSILFVVGADGPVIRAVGGFPGVTARPARDLSVLDLAPG 237
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 54.0 bits (124), Expect = 1e-06
Identities = 31/105 (29%), Positives = 61/105 (58%)
Frame = +2
Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 295
RGH ++ E+P+VVSD +++ KT++ V L + +D+ + ++ +++AG+G R
Sbjct: 127 RGHEFDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARG- 183
Query: 296 RRVQRKGPLIIYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGG 430
R+ +R ++ D+ T A RN+ ++ +++N LAPGG
Sbjct: 184 RKYRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGG 227
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 52.4 bits (120), Expect = 4e-06
Identities = 26/81 (32%), Positives = 46/81 (56%)
Frame = +2
Query: 188 TKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRN 367
T++ V + + +D+ + + +RAGKG MR R+ K L++ ++ GL +A RN
Sbjct: 207 TRKFVAMMEGLGLGADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARN 266
Query: 368 IPCIEMLNVNQLNLLKLAPGG 430
IP ++++ L+ LAPGG
Sbjct: 267 IPGVDIVVAKDLSAEDLAPGG 287
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 113 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLK 244
ARGH +E + ELPLV+ D + ++KT + L+++ A DV K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_UPI000049A0BB Cluster: hypothetical protein 6.t00033; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 6.t00033 - Entamoeba histolytica HM-1:IMSS
Length = 980
Score = 33.5 bits (73), Expect = 2.0
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +2
Query: 122 HIVEKIP-ELPLVVSDKVQE--INKTKQAVIFLRRIKAWSDVLKVYKSQR 262
H+++KI EL V +++ ++ INK K AV L+RI+A ++ K+ KSQR
Sbjct: 219 HMIKKIERELDQVENEEERKKLINKQKTAVTMLKRIEARVNIHKLRKSQR 268
>UniRef50_A0BJA3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 744
Score = 33.1 bits (72), Expect = 2.6
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 332 NKDKGLTRAFRNIPCIEMLNVNQLNLL 412
+KD G+T FRN P E LN++QL+L+
Sbjct: 188 DKDLGITSPFRNKPFAERLNISQLDLV 214
>UniRef50_UPI0000F1F549 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
protein, partial - Danio rerio
Length = 731
Score = 32.3 bits (70), Expect = 4.6
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 149 PLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKG-PLI 325
PLVV Q+I T Q + + + VL R +A KM +R +G P
Sbjct: 413 PLVVKVTEQQIKTTNQPAVSNQELNDHGVVL------RRKATIVKMTEQREEFSRGIPKY 466
Query: 326 IYNKDKGLTRAFRNIPCIEMLNVNQLNLLKLAPGGH 433
++ +GL + N+P + VNQ + L PGG+
Sbjct: 467 RHSYTEGLKNSAINLPKVNPSPVNQALTVSLEPGGN 502
>UniRef50_Q22S72 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1610
Score = 31.5 bits (68), Expect = 8.0
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Frame = +2
Query: 131 EKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGK------MRN 292
EKI E +S K+Q I + KQ I + I+ + K+ K+Q ++ K +
Sbjct: 672 EKIREQTQNISSKIQTIQEFKQDEISNQNIEE-KPIQKIDKNQIIQEKNIKNNSNAITQQ 730
Query: 293 RRRVQRKGPLIIYNKDKGLTRAFRNI-PCIEMLNVNQLNLLKLAP 424
+ +Q+K I +NK T N C +M+ +N L + K P
Sbjct: 731 NKEIQQKDKNIQHNKQTPKTIKCANFQQCKKMIPLNDLQISKKGP 775
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,500,532
Number of Sequences: 1657284
Number of extensions: 6639466
Number of successful extensions: 20043
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 19371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19995
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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