Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C09
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 95 5e-19
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 82 5e-15
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 82 5e-15
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 79 3e-14
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 77 2e-13
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 51 8e-06
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 51 8e-06
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 39 0.048
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 38 0.063
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 38 0.11
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.15
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 37 0.19
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 36 0.25
UniRef50_Q9P7M1 Cluster: Uncharacterized protein C21C3.02c; n=1;... 35 0.78
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 35 0.78
UniRef50_A6SGN4 Cluster: Predicted protein; n=1; Botryotinia fuc... 34 1.4
UniRef50_Q332I4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q8IM32 Cluster: Putative uncharacterized protein; n=2; ... 33 3.1
UniRef50_Q54VH4 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q4STC7 Cluster: Chromosome undetermined SCAF14243, whol... 32 5.5
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 32 5.5
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 31 7.2
UniRef50_O17821 Cluster: Serpentine receptor class delta-41; n=2... 31 7.2
UniRef50_UPI000049951B Cluster: acyl-CoA synthetase; n=2; Entamo... 31 9.6
UniRef50_A7PHX1 Cluster: Chromosome chr13 scaffold_17, whole gen... 31 9.6
UniRef50_A5B6N2 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_Q4E4Y7 Cluster: Elongation factor 1-gamma (EF-1-gamma),... 31 9.6
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 95.1 bits (226), Expect = 5e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +2
Query: 281 MASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
MASL QMH+TGPHIKKRKSRNPLNGNPFAKGVVLKT+IKKPKKPN
Sbjct: 1 MASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPN 45
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 81.8 bits (193), Expect = 5e-15
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +2
Query: 275 RTMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
R MASL QMH++GPHIK R R PL+G PFAKGVVLKTLIKKPKKPN
Sbjct: 42 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPN 88
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 81.8 bits (193), Expect = 5e-15
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +2
Query: 275 RTMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
R MASL QMH++GPHIK R R PL+G PFAKGVVLKTLIKKPKKPN
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPN 74
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 79.4 bits (187), Expect = 3e-14
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = +2
Query: 245 TFSLASHLISRTMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
T L I SL +MH+TGPHIK+RK R PL+G PF KGVVLKTLIKKPKKPN
Sbjct: 36 TSRLGGLTIQERCVSLYRMHRTGPHIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPN 92
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 275 RTMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
R +L +MH+ GP IKKRKS+NP NG PFAKGVVLKTLIKKPKKPN
Sbjct: 61 REKNTLLKMHERGPIIKKRKSKNPFNGAPFAKGVVLKTLIKKPKKPN 107
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 51.2 bits (117), Expect = 8e-06
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +2
Query: 272 SRTMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
S +MA+L QMH+ G P G P KGVVLKT+I+KPKKPN
Sbjct: 38 SHSMATLNQMHRAGKPKPDPPQLGPTFGCPQLKGVVLKTMIRKPKKPN 85
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 51.2 bits (117), Expect = 8e-06
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +2
Query: 278 TMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
+MA+L QMH+ GP + + P G P KGVVL T +KPKKPN
Sbjct: 29 SMATLNQMHRLGPPKRPPRKLGPTEGRPQLKGVVLCTFTRKPKKPN 74
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 38.7 bits (86), Expect = 0.048
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 227 LAPQIQTFSLASHLISRTMASLTQMHKTGPHIKKRKSRNP-LNGNPFAKGVVLKTLIKKP 403
L+P TFS + + + Q +K +K R +++P L N F +GV+L+ +I KP
Sbjct: 46 LSPSSSTFSQLRY----SSINQIQFYKHYDPVKIRPTQSPDLENNCFKRGVILRIMILKP 101
Query: 404 KKPN 415
KKPN
Sbjct: 102 KKPN 105
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 38.3 bits (85), Expect = 0.063
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 212 LSNLVLAPQIQTFSLASHLISRTMASLTQMHK-TGPHIKKRKSRNP-LNGNPFAKGVVLK 385
+SN P Q L S + A+L Q+ + +GP +K+ S P L+ P KGVVL+
Sbjct: 6 MSNTWCTPLRQAQRLFSSTTTM-QATLNQIKRGSGPPRRKKISTAPQLDQCPQRKGVVLR 64
Query: 386 TLIKKPKKPN 415
++ KPKKPN
Sbjct: 65 VMVLKPKKPN 74
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 37.5 bits (83), Expect = 0.11
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 224 VLAP-QIQTFSLASHLISRTMASLTQMHKTGPHIKKRKSRNPLNGNPFAKGVVLKTLIKK 400
V++P Q Q FS +S ++ +T+ + + P K K L G+PF +GV + K
Sbjct: 5 VISPFQAQAFSSSSVML-KTLNQTIRNKEKRPE-KTNKQSVALEGSPFRRGVCTRVFTVK 62
Query: 401 PKKPN 415
PKKPN
Sbjct: 63 PKKPN 67
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 37.1 bits (82), Expect = 0.15
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +2
Query: 143 RRGFSLL------TTGLKTQCTQIQAISQLSNLVLAPQIQTFSLASHLISRTMASLTQMH 304
+R FSLL T L+ + T +Q I S+L + + FS + + T+ + +
Sbjct: 33 KRTFSLLHRTPHTTPPLRRKLTSVQYICTPSSL--SSSSRKFSSTPYQ-NATLNQVRRGC 89
Query: 305 KTGPHIKKRKSRNP-LNGNPFAKGVVLKTLIKKPKKPN 415
+ G + RK+ +P L G P KGV LKT I KPKKPN
Sbjct: 90 RKGK--RARKTTSPALVGRPQMKGVCLKTGITKPKKPN 125
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 36.7 bits (81), Expect = 0.19
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +2
Query: 302 HKTGPHIKKRKSRNP--LNGNPFAKGVVLKTLIKKPKKPN 415
++ GP ++ +S++ ++G KG+VLKT+I+ PKKPN
Sbjct: 53 YRNGPPKRRARSKDKSAISGYSHYKGIVLKTVIRHPKKPN 92
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 36.3 bits (80), Expect = 0.25
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 281 MASLTQMHKTGPHIKKRKSRNP-LNGNPFAKGVVLKTLIKKPKKPN 415
M + Q+ + G K RK+++P L NPF GV L PKKPN
Sbjct: 1 MPTYNQLVRFGRKSKTRKTKSPALESNPFKSGVCLVVKTVTPKKPN 46
>UniRef50_Q9P7M1 Cluster: Uncharacterized protein C21C3.02c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C21C3.02c - Schizosaccharomyces pombe (Fission yeast)
Length = 491
Score = 34.7 bits (76), Expect = 0.78
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 121 NL*DESSKTRVFSANHRLKDAMYTNTSNITIIKPSLSATNTNI*SRFTSHQ*NNGLF--- 291
+L D S+ R N+ ++ M NT+NITI+ PSL ++ + T+ NNGL
Sbjct: 140 DLGDSSAIGRTILVNNSVEPQM-ENTANITIVSPSLKESDFESEEKATND--NNGLIETN 196
Query: 292 -NSDA*DGTSHQEKE 333
NS + + H+E+E
Sbjct: 197 HNSKLEESSEHEEEE 211
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 34.7 bits (76), Expect = 0.78
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 281 MASLTQMHKTGPHIKKRKSRNP-LNGNPFAKGVVLKTLIKKPKKPN 415
M + Q+ K G +K+KS+ P L G P +GV ++ PKKPN
Sbjct: 1 MPTFNQLVKYGREKRKKKSKAPALQGCPQKRGVCVRVYTVTPKKPN 46
>UniRef50_A6SGN4 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 351
Score = 33.9 bits (74), Expect = 1.4
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 264 CEARLNVC--ICGAKTRFDNCDIACICVHCVFKPVVSRENPRLRRFISQI 121
C +++N C +CG T ++CDI +C C + +P L+ +IS I
Sbjct: 42 CTSQVNTCGTLCGGVTDENSCDITSLCYECTC--TSNSSSPALQLYISTI 89
>UniRef50_Q332I4 Cluster: Putative uncharacterized protein; n=1;
Clostridium phage c-st|Rep: Putative uncharacterized
protein - Clostridium botulinum C bacteriophage
Length = 183
Score = 32.7 bits (71), Expect = 3.1
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 91 RHNNFHKTII-NL*DESSKTRVF--SANHRLKDAMYTNTSNITIIKPSLSATNTNI*SRF 261
RH NF K + ++ D+ K V S++ ++DA+ N N I+ PS+S N I R+
Sbjct: 43 RHPNFPKNYMKHIKDKIGKVDVILVSSHKVVRDALKANNINYIIVYPSISLKNEYI-QRY 101
Query: 262 TSHQ*NNGLFN 294
N G N
Sbjct: 102 KERGNNEGFIN 112
>UniRef50_Q8IM32 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2820
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 136 SSKTRVFSANHRLKDAMYTNTSNI-TIIKPSLSATNTNI*SRFTSH 270
++K + N+ LKDA Y N S I +IK +SA N N+ ++F ++
Sbjct: 2427 NNKNNFMNHNNNLKDAQYINKSVIGEVIKGRISAINYNLNNKFETN 2472
>UniRef50_Q54VH4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 433
Score = 32.3 bits (70), Expect = 4.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 261 EARLNVCICGAKTRFDNCDIACICVHCVFKPVVSRENPRLRRFISQINDS 112
E N C+C +KT+ D+C+I+ I + V P + + F I+++
Sbjct: 190 EYEANSCLCDSKTKGDHCEISKIYIDSVKSPTIDGGLTFIYGFFGNISEN 239
>UniRef50_Q4STC7 Cluster: Chromosome undetermined SCAF14243, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF14243, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 2828
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 131 MNLLRRGFSLLTTGLKTQCTQIQAISQLSNLVLAPQIQTFSLASHLISRTMASLTQMHKT 310
+ LL R ++ T G K +CT I+ L+ L+ T +LA H R+ S + KT
Sbjct: 1765 LGLLFRVTAVSTDGHKDECTSIETGCDLTGLLCGRYYTTTALAEHSDCRSKPSNSITIKT 1824
Query: 311 GP 316
P
Sbjct: 1825 AP 1826
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 31.9 bits (69), Expect = 5.5
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 314 PHIKKRKSRN--PLNGNPFAKGVVLKTLIKKPKKPN 415
P KK + N L G P KGV +K I KPKKPN
Sbjct: 11 PRRKKMHTNNVKALEGCPQKKGVCVKLRIVKPKKPN 46
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 31.5 bits (68), Expect = 7.2
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 281 MASLTQMHKTGPHIKKR---KSRNPLNGNPFAKGVVLKTLIKKPKKPN 415
M+ L ++ K P KK K+ LN NP K + LK L PKKPN
Sbjct: 1 MSRLLELLKK-PRFKKSIASKAGKKLNSNPQRKVICLKVLTISPKKPN 47
>UniRef50_O17821 Cluster: Serpentine receptor class delta-41; n=2;
Caenorhabditis|Rep: Serpentine receptor class delta-41 -
Caenorhabditis elegans
Length = 324
Score = 31.5 bits (68), Expect = 7.2
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2
Query: 134 NLLRRGFSLLTTGLKTQCTQIQAISQLSNLVLAPQIQTFSLASHLISRTMASLTQMHKTG 313
N +R + L+ +K + L+ VLA Q+ ++S ++ + L+ K
Sbjct: 160 NEIRERYKLINVDVKDH----SVVGTLNFKVLASQVNVCIMSSSVVMLPIIGLSSRRKLL 215
Query: 314 PHIKKRKSRNPLNGNP----FAKGVVLKTLI 394
HI+K R N F KGV+L+T +
Sbjct: 216 EHIQKTSDRVSQTKNSQNKMFVKGVILQTFL 246
>UniRef50_UPI000049951B Cluster: acyl-CoA synthetase; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: acyl-CoA synthetase -
Entamoeba histolytica HM-1:IMSS
Length = 1017
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 132 ISQINDSFVKIIMSLFQI*LNKNLQMDKNNLL*PRAD---SCSPGST 1
I +NDS++ + SL Q+ +NK L ++ N + P + C+ GST
Sbjct: 159 IISMNDSYLYSLSSLLQVPINKELLQNERNQIQPEDELFYGCTSGST 205
>UniRef50_A7PHX1 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_17, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 967
Score = 31.1 bits (67), Expect = 9.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 360 GFPLSGFLDFLFLM*GPVLCI*VKEAIVLLMRCEAR--LNVCICGAKTRFDNCDIACI 193
G L G LD LF GP+ I KEA+ L + ++ CI G + D +I C+
Sbjct: 193 GLQLPGVLDELFSYEGPLGAIFSKEAVTLYLWAPTAQVVHACIYGDPSGGDPLEIVCL 250
>UniRef50_A5B6N2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 452
Score = 31.1 bits (67), Expect = 9.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 360 GFPLSGFLDFLFLM*GPVLCI*VKEAIVLLMRCEAR--LNVCICGAKTRFDNCDIACI 193
G L G LD LF GP+ I KEA+ L + ++ CI G + D +I C+
Sbjct: 229 GLQLPGVLDELFSYEGPLGAIFSKEAVTLYLWAPTAQVVHACIYGDPSGGDPLEIVCL 286
>UniRef50_Q4E4Y7 Cluster: Elongation factor 1-gamma (EF-1-gamma),
putative; n=1; Trypanosoma cruzi|Rep: Elongation factor
1-gamma (EF-1-gamma), putative - Trypanosoma cruzi
Length = 162
Score = 31.1 bits (67), Expect = 9.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 252 LNVCICGAKTRFDNCDIACICVHCVFKPVV 163
L +C+CGA F CD+ + C F V+
Sbjct: 8 LRLCVCGAHVSFLQCDVDGVAAACAFMRVL 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,679,135
Number of Sequences: 1657284
Number of extensions: 6226854
Number of successful extensions: 13570
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13559
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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