Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B19
(838 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 246 4e-64
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 241 2e-62
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 192 9e-48
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 182 7e-45
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 177 2e-43
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 177 3e-43
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 173 6e-42
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 171 2e-41
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 170 4e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 165 9e-40
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 164 3e-39
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 163 4e-39
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 159 1e-37
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 155 1e-36
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 151 2e-35
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 148 1e-34
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 119 8e-26
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 111 2e-23
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 103 6e-21
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 102 1e-20
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 87 5e-16
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 86 9e-16
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 85 2e-15
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 83 8e-15
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 78 2e-13
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 77 7e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 72 2e-11
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 69 2e-10
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 69 2e-10
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 59 2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 58 3e-07
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 58 3e-07
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.019
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 41 0.044
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 39 0.18
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.31
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.55
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.7
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.7
UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber... 35 2.2
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 3.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 5.1
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.1
UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19; ... 34 5.1
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 6.7
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 8.9
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.9
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 8.9
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 246 bits (603), Expect = 4e-64
Identities = 124/219 (56%), Positives = 146/219 (66%), Gaps = 2/219 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 27 VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 86
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SGQGAFGNMCRGGRMFAPTK WRRWH ++GH IE+
Sbjct: 87 SGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEE 146
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXT 687
+PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGK
Sbjct: 147 VPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRG 206
Query: 688 PHNL-XQGSGSDSRFXNIPGWS-SXMLQAEPPXXGPGGH 798
P + + +G F NIPG + + + PGGH
Sbjct: 207 PCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGH 245
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 241 bits (589), Expect = 2e-62
Identities = 122/219 (55%), Positives = 146/219 (66%), Gaps = 2/219 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXT 687
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G +
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 688 PHNL-XQGSGSDSRFXNIPGWSSXML-QAEPPXXGPGGH 798
P + + G F NIPG + + + PGGH
Sbjct: 210 PLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGH 248
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 192 bits (468), Expect = 9e-48
Identities = 95/172 (55%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR
Sbjct: 26 VFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHR 85
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+GQ AFGNMCR GRMFAPTK WR+WH ARGH I +
Sbjct: 86 AGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISE 145
Query: 508 IPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK
Sbjct: 146 VAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGK 197
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 182 bits (444), Expect = 7e-45
Identities = 88/169 (52%), Positives = 109/169 (64%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGTGRAVARIPR+ GGGT
Sbjct: 26 VFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGGGTST 85
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SG GAFGNMCRGGRMFAPTK +RRWH +RGH I
Sbjct: 86 SGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGN 145
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GK
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGK 194
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 177 bits (432), Expect = 2e-43
Identities = 85/169 (50%), Positives = 107/169 (63%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G GTHR
Sbjct: 28 VFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGSGTHR 87
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SGQ AFGN CR GRM P K WRRWH ARGH I +
Sbjct: 88 SGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQ 147
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K
Sbjct: 148 VPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISK 196
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 177 bits (431), Expect = 3e-43
Identities = 96/218 (44%), Positives = 123/218 (56%), Gaps = 4/218 (1%)
Frame = +1
Query: 157 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 336
+PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ
Sbjct: 30 SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQ 89
Query: 337 GAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPE 516
AF N RGG M++P K WRRWH ARGH I+ +PE
Sbjct: 90 AAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPE 149
Query: 517 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCAT---VVVSSVXT 687
LPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK V
Sbjct: 150 LPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLI 209
Query: 688 PHNLXQGSGSDSRFXNIPGWS-SXMLQAEPPXXGPGGH 798
H+ Q G + F NI G S + + PGGH
Sbjct: 210 VHD--QNEGLANAFRNISGVDISNVXRLNIRDLAPGGH 245
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 173 bits (420), Expect = 6e-42
Identities = 92/200 (46%), Positives = 113/200 (56%), Gaps = 1/200 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR
Sbjct: 27 VFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHR 86
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+GQ AFGNMCRGG MF PTK WRRW ARGH I
Sbjct: 87 AGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISN 146
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXT 687
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GK
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNG 206
Query: 688 PHNLXQ-GSGSDSRFXNIPG 744
P + SG F NIPG
Sbjct: 207 PLIIYSXDSGIKKAFRNIPG 226
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 171 bits (416), Expect = 2e-41
Identities = 82/170 (48%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR
Sbjct: 26 VFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGGTHR 85
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+GQ A+ N CR G M+APT+ WRRWH +RGH IE
Sbjct: 86 AGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEA 145
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGKGK 654
+ E+P+VV D +++INKTK AV L + +++ ++ K + R R G+ K
Sbjct: 146 LREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 170 bits (413), Expect = 4e-41
Identities = 88/171 (51%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV GT R
Sbjct: 28 VFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSASGTSR 87
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SGQGAFGNMCRGG MF+P K +RR+H ARGH I
Sbjct: 88 SGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINN 147
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGK 654
+PELPLV+++++Q INKT AV F + K + +K + S +R GKGK
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGK 198
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 165 bits (402), Expect = 9e-40
Identities = 77/169 (45%), Positives = 104/169 (61%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGGTHR
Sbjct: 26 VFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGGTHR 85
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SGQ A+ N CR G MFAPT+ WR WH +RGH +E
Sbjct: 86 SGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVES 145
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGK 193
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 164 bits (398), Expect = 3e-39
Identities = 85/170 (50%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R
Sbjct: 27 VFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGR 86
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+GQGAFGNM R G MF+P K +R+W ARGH I
Sbjct: 87 NGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAG 146
Query: 508 IPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GK
Sbjct: 147 VPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGK 196
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 163 bits (397), Expect = 4e-39
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 144 VFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGTHR 203
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWH 405
SGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 204 SGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 159 bits (385), Expect = 1e-37
Identities = 80/169 (47%), Positives = 98/169 (57%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R
Sbjct: 24 VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRR 83
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+GQGAF N CR GRM PTK RRW +ARGH I
Sbjct: 84 AGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISD 143
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+ LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGK
Sbjct: 144 VKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGK 192
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 155 bits (377), Expect = 1e-36
Identities = 89/206 (43%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Frame = +1
Query: 205 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 384
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 385 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 555
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 556 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXTP---HNLXQ-GSGSDS 723
KT AV L+ + A +D K S++LRAGKGK P +N + G
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVK 201
Query: 724 RFXNIPG-WSSXMLQAEPPXXGPGGH 798
F NIPG +S + PGGH
Sbjct: 202 AFRNIPGVETSSVYSMNLLQLAPGGH 227
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 151 bits (366), Expect = 2e-35
Identities = 75/169 (44%), Positives = 100/169 (59%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHR
Sbjct: 22 VFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHR 81
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SGQGA N CRGGR+F PT WR+WH +RG+ ++
Sbjct: 82 SGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKT 141
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGK
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGK 189
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 148 bits (359), Expect = 1e-34
Identities = 76/208 (36%), Positives = 113/208 (54%), Gaps = 1/208 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G++R
Sbjct: 24 VFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSGSNR 83
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+GQGA+ N CRGG F P RRW QARGH++ +
Sbjct: 84 NGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHVLGE 143
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXT 687
+ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK +
Sbjct: 144 VKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKG 203
Query: 688 PHNL-XQGSGSDSRFXNIPGWSSXMLQA 768
P + + G F NIPG + ++A
Sbjct: 204 PLVIYNEDKGIVKAFRNIPGVETISVKA 231
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 119 bits (287), Expect = 8e-26
Identities = 70/199 (35%), Positives = 94/199 (47%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR G
Sbjct: 23 VFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHG----- 77
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
G GA+ N RGG M PT RRW +ARGH I
Sbjct: 78 -GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIAD 136
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXT 687
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GK +
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Query: 688 PHNLXQGSGSDSRFXNIPG 744
P + F N+PG
Sbjct: 195 PLVIYNTEDVARGFRNLPG 213
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 111 bits (268), Expect = 2e-23
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Frame = +1
Query: 151 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 330
F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G +
Sbjct: 22 FEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRRHPAA 81
Query: 331 GQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
G+ A GG + APT P + W + RGH+I+
Sbjct: 82 GRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHVIDD 140
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGK 189
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 103 bits (247), Expect = 6e-21
Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Frame = +1
Query: 487 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATV 666
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGK
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 667 VVSSVXTPHNL-XQGSGSDSRFXNIPGWSSXML-QAEPPXXGPGGH 798
P + + G F NIPG + + PGGH
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGH 110
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 102 bits (245), Expect = 1e-20
Identities = 58/168 (34%), Positives = 81/168 (48%)
Frame = +1
Query: 151 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 330
F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G R
Sbjct: 48 FLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLWPR- 106
Query: 331 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 510
G F RGGR P K ++ H ARGH++EK+
Sbjct: 107 --GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKV 164
Query: 511 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
P LP+VV ++IN+ K+A L W D+ + + ++RAGKGK
Sbjct: 165 PSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGK 212
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 87.0 bits (206), Expect = 5e-16
Identities = 41/133 (30%), Positives = 67/133 (50%)
Frame = +1
Query: 241 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 420
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 421 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 600
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 601 SDILKVYKSQRLR 639
SD K S R
Sbjct: 179 SDFKKAMISHAKR 191
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 86.2 bits (204), Expect = 9e-16
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +1
Query: 484 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCAT 663
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGK
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
Query: 664 VVVSSVXTP 690
+ SS P
Sbjct: 62 PLASSAGDP 70
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/169 (27%), Positives = 81/169 (47%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
+F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 22 IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG----- 76
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
S + AF GGR P + +H + RGH + +
Sbjct: 77 SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQVSE 136
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK
Sbjct: 137 LEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGK 185
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 83.0 bits (196), Expect = 8e-15
Identities = 49/169 (28%), Positives = 79/169 (46%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
+F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 28 IFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK-----N 82
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
SG+ A GGR+ P ++ +ARGH+ +
Sbjct: 83 SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHVFKD 142
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
P+VV D + + T + FL+++ + D+ +V + R+RAGKGK
Sbjct: 143 SVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGK 191
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 78.2 bits (184), Expect = 2e-13
Identities = 63/209 (30%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF +PIR D+VN VH ++KN + + + A PR G
Sbjct: 23 VFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPRPSPGAP-- 80
Query: 328 SGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXXXXXXXXXX 480
+ +CR AP K WRRWH
Sbjct: 81 VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAASAVPSLL 140
Query: 481 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCA 660
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGK
Sbjct: 141 LARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMR 200
Query: 661 TVVVSSVXTPHNL-XQGSGSDSRFXNIPG 744
P + + +G F NIPG
Sbjct: 201 NRRYVQRRGPLVVYSEDNGVTRAFRNIPG 229
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 76.6 bits (180), Expect = 7e-13
Identities = 46/169 (27%), Positives = 76/169 (44%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 21 VFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG---- 76
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
+ GGR P KP R+W + R H+ E
Sbjct: 77 -RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFE- 134
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GK
Sbjct: 135 -GELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGK 182
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 172 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 318
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 538 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGK
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGK 136
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 72.1 bits (169), Expect = 2e-11
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGT 321
VF P R DL+ + + + QP AG SA+S TG ARI R++GGG
Sbjct: 21 VFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGG 80
Query: 322 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 501
R G+ RGGR P K + H RGHII
Sbjct: 81 RRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTVAGRGHII 140
Query: 502 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 648
+ I ELP+V++D ++ ++K + L L ++D+ ++ + ++ R GK
Sbjct: 141 DGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGK 187
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 68.5 bits (160), Expect = 2e-10
Identities = 49/199 (24%), Positives = 85/199 (42%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 23 VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGSRVV 82
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
A G G+ + + + + RGH ++
Sbjct: 83 GIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHRFKE 137
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCATVVVSSVXT 687
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GK +
Sbjct: 138 GLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKS 197
Query: 688 PHNLXQGSGSDSRFXNIPG 744
+ + S + F ++PG
Sbjct: 198 VLIVARNSSAMKAFRSLPG 216
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 68.5 bits (160), Expect = 2e-10
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
+F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 34 IFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG----- 88
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
S + A NM RGGR P + + + RGH
Sbjct: 89 SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHRF-S 147
Query: 508 IPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
LP+V+ V +I+ ++A L + + D+L+ + +R AGKGK
Sbjct: 148 AETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGK 197
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 58.8 bits (136), Expect = 2e-07
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +1
Query: 484 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKCAT 663
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGK
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 664 VVVSSVXTPHNL--XQGSGSDSRFXNIPGWS-SXMLQAEPPXXGPGGH 798
S P + +G+ F NIPG + + + PGGH
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGH 109
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 58.0 bits (134), Expect = 3e-07
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Frame = +1
Query: 151 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVARIPRV 306
F IR D++ +++ + RQPY S AG Q SA SW T GR ++R+ R
Sbjct: 22 FNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISRVSRA 81
Query: 307 ---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 477
R G +G + P K + W+
Sbjct: 82 ILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATKELDL 140
Query: 478 XQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAGKGK
Sbjct: 141 VKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGK 195
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 58.0 bits (134), Expect = 3e-07
Identities = 45/168 (26%), Positives = 76/168 (45%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 327
VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G R
Sbjct: 21 VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGRARR 79
Query: 328 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 507
Q GR P K + RGH ++
Sbjct: 80 VPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDR 133
Query: 508 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKG 651
E+P+VV+D +++ KT++ V L L +DI + ++ +++AG+G
Sbjct: 134 -DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQG 179
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 48.4 bits (110), Expect = 2e-04
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +3
Query: 264 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLG 443
++G+R C SA W VR C+R HV WW +VR E L LAP QP A L
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALR 174
Query: 444 SSRCCYWRPSARSG*RTHY*KDSRA--SLGCSRQSPGDQQDQTGCHLPE 584
C A +G RA + G PG ++D+ G +PE
Sbjct: 175 CGVCARRVVCAVAGDVARPPDRQRAGGAAGGGGLDPGLREDEGGYGVPE 223
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.019
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 484 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 615
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 40.7 bits (91), Expect = 0.044
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 529 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 654
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSK 42
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 38.7 bits (86), Expect = 0.18
Identities = 55/225 (24%), Positives = 81/225 (36%), Gaps = 26/225 (11%)
Frame = +1
Query: 148 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAVARIPRV 306
VF IR DL+ ++ N RQ Y + +AG + S E WG GR V+RI R
Sbjct: 53 VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGVSRIMRK 112
Query: 307 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 486
G T A RGGR K + W
Sbjct: 113 AGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIAASASSNLVSE 167
Query: 487 RGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLRRLKAWSDILKVY 621
RGH E P+++ D+ ++ T++ V + L +D+ +
Sbjct: 168 RGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMMEGLGLGADLDRAR 227
Query: 622 KSQRLRAGKGKCATVVVSSVXTPHNL----XQGSGSDSRFXNIPG 744
+ +RAGKG T+ TP ++ Q +G NIPG
Sbjct: 228 TGRTIRAGKG---TMRGRKYRTPKSILLVVSQTNGLAKAARNIPG 269
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.31
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 383 VGANIRPPRHMLPKAP*P 330
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.55
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 486 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 385
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 346 RRHPDRTYGYHHHGHAEFGQQHVR-YP 269
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 289 ARIPRVRGGGTHRSGQGAFGNMCRGG 366
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber
DSM 13855|Rep: Sensor protein - Salinibacter ruber
(strain DSM 13855)
Length = 942
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 392 GGAGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSFPWL*PTKSRRSTRPNRL 571
GG GTV +T +G RP PL+LLAS + + +T+L + + W+ T + R L
Sbjct: 146 GGGGTVLATL-TGPRPETSPLILLASMGTIAVVETVLTQ--GWLWIRKTVREQEARLQGL 202
Query: 572 SSS 580
++S
Sbjct: 203 TNS 205
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 361 HDTCYRRHPDRTYGYHHHGHAEFG 290
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 373 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 260
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 5.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 361 HDTCYRRHPDRTYGYHHHGHAEFGQQH 281
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.1
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 259 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 369
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19;
Euteleostomi|Rep: Uncharacterized protein CXorf39 - Homo
sapiens (Human)
Length = 388
Score = 33.9 bits (74), Expect = 5.1
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 579 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 424
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 423 SEVDATVPAPPGL 385
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 6.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 362 PRHMLPKAP*PDLWVPPPR 306
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 8.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 364 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 284
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.1 bits (72), Expect = 8.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 373 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQP 239
TY+ H Y +HP T+ YHH H + ++ ++P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 361 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 233
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,752,281
Number of Sequences: 1657284
Number of extensions: 16979678
Number of successful extensions: 54506
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 50416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54112
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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