Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B16
(798 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 246 4e-64
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 79 2e-13
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 74 4e-12
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 62 2e-08
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 58 2e-07
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 54 3e-06
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 47 6e-04
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 47 6e-04
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 47 6e-04
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 45 0.002
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 45 0.003
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 42 0.014
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 40 0.072
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 40 0.096
UniRef50_Q5ATV4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_Q8NA72 Cluster: Uncharacterized protein C5orf37; n=25; ... 39 0.13
UniRef50_Q8NA72-2 Cluster: Isoform 2 of Q8NA72 ; n=4; Mammalia|R... 38 0.39
UniRef50_UPI0000F32FE2 Cluster: UPI0000F32FE2 related cluster; n... 36 0.89
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.6
UniRef50_Q0U7L0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_UPI000155324B Cluster: PREDICTED: hypothetical protein;... 34 3.6
UniRef50_Q80VX7 Cluster: Chemokine-like factor superfamily 1 iso... 34 3.6
UniRef50_A3X9B4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q61UQ5 Cluster: Putative uncharacterized protein CBG051... 33 6.3
UniRef50_Q8TFG4 Cluster: Uncharacterized protein PB18E9.04c prec... 33 6.3
UniRef50_UPI000069F0CE Cluster: UPI000069F0CE related cluster; n... 33 8.3
UniRef50_A0E1N2 Cluster: Chromosome undetermined scaffold_73, wh... 33 8.3
UniRef50_O74555 Cluster: Branchpoint-bridging protein; n=1; Schi... 33 8.3
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 246 bits (603), Expect = 4e-64
Identities = 135/189 (71%), Positives = 141/189 (74%)
Frame = +3
Query: 51 AASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 230
AASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 11 AASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAPPPPLGSSLGR 70
Query: 231 XXQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL 410
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL
Sbjct: 71 SPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL 130
Query: 411 KIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQXRIIKSP 590
KIPVTVDLCWTTADVTVEG NVLATPSS+RIT+GGLA + P +LG IIKSP
Sbjct: 131 KIPVTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLP-CDLGYINP-IIKSP 188
Query: 591 EFHTPNHPQ 617
+T NHP+
Sbjct: 189 IPYT-NHPR 196
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/90 (42%), Positives = 55/90 (61%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGL 518
DLCWT VT +L+ + RI G +
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSV 157
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 74.1 bits (174), Expect = 4e-12
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHP 542
D W ++ V++ G +L+T +R+T GG P SS+P
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGG--PITSSNP 166
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGG 515
DL W ++ + +L T +R T+GG
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGG 121
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 58.4 bits (135), Expect = 2e-07
Identities = 36/115 (31%), Positives = 55/115 (47%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQXRIIKSPEF 596
L W A T +L T +I++GG +S ANL + I S +
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGGQVTNSSPAKVSANLLMMNPHIKDSTSY 159
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/89 (31%), Positives = 47/89 (52%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG 515
DL W+T +V + +L +R IGG
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGG 1907
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/89 (33%), Positives = 42/89 (47%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG 515
L W + T ++L IGG
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGG 124
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 282 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 461
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 462 EGVNVLATPSSSRITIGG 515
++L S T GG
Sbjct: 104 SPTDILKIYGGSSYTFGG 121
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGG 515
+CW A+ V + T IGG
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGG 120
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGG 515
WT A ++ + + T+GG
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGG 2121
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 306 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 485
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 486 PSSSRITIGG 515
R IGG
Sbjct: 112 YGGQRFLIGG 121
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 42.3 bits (95), Expect = 0.014
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGG 515
+V L W + T +L +GG
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGG 120
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 39.9 bits (89), Expect = 0.072
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG 515
WT A + L +T+GG
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGG 1996
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 39.5 bits (88), Expect = 0.096
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 243 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 417 PVTVDLCWTTADVTVEGVNVL 479
P+TV L W A+ +L
Sbjct: 89 PLTVYLAWVPANSPATPTQIL 109
>UniRef50_Q5ATV4 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 720
Score = 39.1 bits (87), Expect = 0.13
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +3
Query: 282 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVT-VDLCWTTADVT 458
G +++ QS P+ SSI+K D N A P+AP+ PV + A V
Sbjct: 184 GANGAASATPAQSAPDTSSILKALADMAKQNTAA---PAAPAAAAPVNPLSALSQQATVP 240
Query: 459 VEGVNVLATPSSSRITIGGLAPYASSHPPLANLG-LXQXRIIKSP--EFHTP 605
+ + S+++ G+ PYA+ P A LG L Q + P + HTP
Sbjct: 241 QPASSSVDQALQSQVSSAGVNPYAAVANPFAALGNLAQNPALVQPQSQSHTP 292
>UniRef50_Q8NA72 Cluster: Uncharacterized protein C5orf37; n=25;
Eutheria|Rep: Uncharacterized protein C5orf37 - Homo
sapiens (Human)
Length = 575
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 403 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 461
Query: 573 RIIKSPEFHTP 605
S E + P
Sbjct: 462 ATAASEEMYVP 472
>UniRef50_Q8NA72-2 Cluster: Isoform 2 of Q8NA72 ; n=4; Mammalia|Rep:
Isoform 2 of Q8NA72 - Homo sapiens (Human)
Length = 399
Score = 37.5 bits (83), Expect = 0.39
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 286 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 344
Query: 573 RIIKSPEFHT 602
S E T
Sbjct: 345 ATAASEEMQT 354
>UniRef50_UPI0000F32FE2 Cluster: UPI0000F32FE2 related cluster; n=1;
Bos taurus|Rep: UPI0000F32FE2 UniRef100 entry - Bos
Taurus
Length = 706
Score = 36.3 bits (80), Expect = 0.89
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 539 PSPGESRATSXPN-HQIPRIPYXKPPPNLXSNFPSIPLNP-VLKGISXPGVKXPXGXQKG 712
P P ESR P H++PR P + PP+ ++ P+ P +P V + +S P P + G
Sbjct: 294 PVPTESRGLPSPGPHRVPRSPAPRSPPSPTASRPASPPSPTVSRPLSPPSPVHPRPQEAG 353
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 327 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRI 503
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_Q0U7L0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 780
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 509 WRSRPLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNPVLKGISXPGVK 688
W RP+ + P S ESR+ P+ P + PP+ + S NP + S P
Sbjct: 651 WTLRPMALAPRSGQESRSEVVPSQASPGADTSRLPPSSSTMTGSSASNPSVPESSAPAST 710
Query: 689 XPXGXQKGP 715
P GP
Sbjct: 711 APGPSATGP 719
>UniRef50_UPI000155324B Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 161
Score = 34.3 bits (75), Expect = 3.6
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 485 PFILSHYYWRSRPLCIKPPSPGESRATSXPNHQIPRIP--YXKPPPNLXSNFPS 640
P +S W S P+C PPS G S A S + ++ P PP + + +PS
Sbjct: 72 PAPISSLPWSSSPMCPCPPSLGASAAVSPSSDRVHSFPPKAQSPPEAVRAGYPS 125
>UniRef50_Q80VX7 Cluster: Chemokine-like factor superfamily 1
isoform 2; n=3; Murinae|Rep: Chemokine-like factor
superfamily 1 isoform 2 - Mus musculus (Mouse)
Length = 264
Score = 34.3 bits (75), Expect = 3.6
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +2
Query: 512 RSRPLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNPVLKGISXPGVKX 691
R R L PS ++ A S P HQ P +P P S PS+P P +G S PG
Sbjct: 25 RPRVLDASSPSDSQAYAASAPPHQGPSVP-GTPA----SQGPSVPGTPASQGPSVPGTPA 79
Query: 692 PXG 700
G
Sbjct: 80 SQG 82
>UniRef50_A3X9B4 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 876
Score = 34.3 bits (75), Expect = 3.6
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLA 551
P AP+ PV V+ T D T+E +A SS R G AP +S P A
Sbjct: 214 PKAPAASFPVQVEDQVTAVDATIEDSGPIAGFSSRRRKSSGAAPASSKSPAQA 266
>UniRef50_Q61UQ5 Cluster: Putative uncharacterized protein CBG05197;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG05197 - Caenorhabditis
briggsae
Length = 219
Score = 33.5 bits (73), Expect = 6.3
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNPVLKG 667
PP P + R P+H+ P P +PPP S +P PL PV+ G
Sbjct: 139 PPPPPQRRPPPPPHHRPPPPPGYRPPP--PSYYPPPPL-PVIVG 179
>UniRef50_Q8TFG4 Cluster: Uncharacterized protein PB18E9.04c
precursor; n=1; Schizosaccharomyces pombe|Rep:
Uncharacterized protein PB18E9.04c precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 800
Score = 33.5 bits (73), Expect = 6.3
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 1/126 (0%)
Frame = +3
Query: 279 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVT 458
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 459 VEGVNVLATP-SSSRITIGGLAPYASSHPPLANLGLXQXRIIKSPEFHTPNHPQT*XPIF 635
V +TP +++ T PY S+ +N + + S T N + ++
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLY 599
Query: 636 XQFPLT 653
P+T
Sbjct: 600 TSTPIT 605
>UniRef50_UPI000069F0CE Cluster: UPI000069F0CE related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069F0CE UniRef100 entry -
Xenopus tropicalis
Length = 607
Score = 33.1 bits (72), Expect = 8.3
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNPV 658
P C PPSP S A S PN +P P PP+ + P P PV
Sbjct: 139 PNCSVPPSPNCSLAPS-PNCSVPFSPNCSVPPSPNCSLPPSPNCPV 183
>UniRef50_A0E1N2 Cluster: Chromosome undetermined scaffold_73, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_73,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 442
Score = 33.1 bits (72), Expect = 8.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 533 KPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNP 655
+PP P ++ TS P + P P +PPP N P P P
Sbjct: 96 RPPGPPAAKPTSNPPNPPPPKPASQPPPPPVQNLPPPPPPP 136
>UniRef50_O74555 Cluster: Branchpoint-bridging protein; n=1;
Schizosaccharomyces pombe|Rep: Branchpoint-bridging
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 587
Score = 33.1 bits (72), Expect = 8.3
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKP-PPNLXSNFPSIPLNPVLKGISXPGVKXPXG 700
PP PG + Q P +P PP + + FP P P + GI PG P G
Sbjct: 506 PPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGI--PGATAPPG 559
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,501,973
Number of Sequences: 1657284
Number of extensions: 14793542
Number of successful extensions: 38830
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 35531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38572
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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