Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40077
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.9  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFTVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFTVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFTVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFTVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 277 KPFSNEGKPLVVQFTVKHEQDID 345
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 170 FGKFKLTAGKFFSDPEDDKGLKTSED 247
           FGK   T   FFSD + D  +    D
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD 228


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 567 QVSQSECTNVCRHHLCSGYLFDEMVLTL 484
           Q  Q  C N+  ++   GY+F  ++ +L
Sbjct: 34  QKGQKTCLNLSINYCICGYIFSAILFSL 61


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 170 FGKFKLTAGKFFSDPEDDKGLKTSED 247
           FGK   T   FFSD + D  +    D
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD 228


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 134 FPTNHQETSPQRIH 93
           FP NH    P+++H
Sbjct: 41  FPLNHLNEEPEKLH 54


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 221 HPLGR*RTFQQSI*TFQILFLGAHCTPNCFPTN 123
           +P+G       S+  F ++FL   CT  C   N
Sbjct: 133 YPVGIVGVKNASLFIFDLIFLSFRCTKLCKEAN 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,935
Number of Sequences: 336
Number of extensions: 5226
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)