Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20174
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.67 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   0.88 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -2

Query: 508 FSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLC-LCTHSSFC 332
           FS    ++     + F +++   F  SE +  +++     YFR +  KT C L T   +C
Sbjct: 357 FSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTALVYC 416

Query: 331 GIRALAVPLLL 299
            +    +  LL
Sbjct: 417 SLAIFVLCELL 427


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 598 GGNTFLAAVACLLHFIAAGLSLVAKHLRPGFSAFFL 491
           G +T L   +CLLH +     L+ +    G+  F L
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLLIEVCNAGYLPFIL 303


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 204 ILDHLTDVLSGVGVCDLI 151
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 483 YIHRKKAEKPGRRCLATRLRPAAI 554
           Y+ RK  E   ++CL+  +RP  +
Sbjct: 235 YMRRKCQECRLKKCLSVGMRPECV 258


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 200 LIILRMFCLELVFAISLISFGSNHTFFLPHRITEAASLFC 81
           L I   +C  ++F + L+     + FF    I     LFC
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,210
Number of Sequences: 336
Number of extensions: 3630
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)