Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20168
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    28   0.062
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    28   0.062
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.76 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 475  LRSIGANVQYARNTLKYQHIRKQ*FKCGICTYLCSNK 365
            L  +GAN Q     L++  + K  FKC ICTY   NK
Sbjct: 1063 LTFLGANAQDDEGGLEFS-VNKL-FKCMICTYKADNK 1097


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 475  LRSIGANVQYARNTLKYQHIRKQ*FKCGICTYLCSNK 365
            L  +GAN Q     L++  + K  FKC ICTY   NK
Sbjct: 1063 LTFLGANAQDDEGGLEFS-VNKL-FKCMICTYKADNK 1097


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +3

Query: 306 IIYLDNSL--SIILHISKNNCYLLEHKYVQIPH 398
           ++ LD+S   + ++  +KNN YL+ +KY+ + H
Sbjct: 8   LLLLDSSTQPNYLILSNKNNTYLVLNKYLLVKH 40


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 11  VHAILKLIAIFIEILICKYIMKTEVC 88
           VH +L L +  + +++  Y +  EVC
Sbjct: 269 VHTLLILFSCLLHLVVTPYYLLIEVC 294


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 421 HIRKQ*FKCGICTYLCSNK 365
           H   + F+C  C Y C NK
Sbjct: 253 HAGSKPFQCNKCDYTCVNK 271



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 403 FKCGICTYLCSNK*QLFFEICNI 335
           F C +C   CS+K   F  I  +
Sbjct: 499 FTCNMCGVECSDKVSFFLHIARV 521


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 421 HIRKQ*FKCGICTYLCSNK 365
           H   + F+C  C Y C NK
Sbjct: 11  HAGSKPFQCNKCDYTCVNK 29


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 355 FFEICNIILNE 323
           +FEIC+++LNE
Sbjct: 456 YFEICDMLLNE 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,096
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)