Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20165
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.64 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.64 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   7.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 227 LDKLKAERELGITIDIALWKFETSKYYVTII 319
           L KLK   +LG  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 227 LDKLKAERELGITIDIALWKFETSKYYVTII 319
           L KLK   +LG  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 640 GDNMLELQPKCLGSRDAVER 699
           G  + EL+P+ + S+DA+ R
Sbjct: 282 GPQITELEPETIESQDAITR 301


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 640 GDNMLELQPKCLGSRDAVER 699
           G  + EL+P+ + S+DA+ R
Sbjct: 515 GPQITELEPETIESQDAITR 534


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 640 GDNMLELQPKCLGSRDAVER 699
           G  + EL+P+ + S+DA+ R
Sbjct: 515 GPQITELEPETIESQDAITR 534


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 649 CCLRAIQKWARKRQQLGCSQSS*CMRIL 566
           CC  A+      RQ +  S+   C+R +
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 649 CCLRAIQKWARKRQQLGCSQSS*CMRIL 566
           CC  A+      RQ +  S+   C+R +
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIRYM 534


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   GTSGYYTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 181
           G  G  TQ V      +G ++ H++  VIG + SG    T    Y      KR   +F+ 
Sbjct: 18  GGRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPI----KRKRVRFQT 73

Query: 182 EAQ-EMGKGSFKYAWVLDK 235
             + + G  S +  W   K
Sbjct: 74  RVKVQEGSKSGRNKWFFQK 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,600
Number of Sequences: 336
Number of extensions: 4011
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)