Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20158
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    53   2e-09
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    53   2e-09
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.1  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 52.8 bits (121), Expect = 2e-09
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +2

Query: 17  NAIPVYLRWITYLSYIRYGFEGTALATYSFNRTKLQC-HAPYCHFKYPQTTLEDLDMEDA 193
           ++IP+Y +W+++LS+ RYG  G  +     N T +QC +A     K     LE     +A
Sbjct: 579 SSIPIYFKWLSFLSWFRYG-NGALMINQWENVTNIQCPNADLPCPKDGHVILETFHFSEA 637

Query: 194 DFALDIAALCLIFVLLRIFAF 256
           DF +D+  L ++ V  R+ AF
Sbjct: 638 DFVMDVVMLAVLIVGFRLVAF 658


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 52.8 bits (121), Expect = 2e-09
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +2

Query: 17  NAIPVYLRWITYLSYIRYGFEGTALATYSFNRTKLQC-HAPYCHFKYPQTTLEDLDMEDA 193
           ++IP+Y +W+++LS+ RYG  G  +     N T +QC +A     K     LE     +A
Sbjct: 579 SSIPIYFKWLSFLSWFRYG-NGALMINQWENVTNIQCPNADLPCPKDGHVILETFHFSEA 637

Query: 194 DFALDIAALCLIFVLLRIFAF 256
           DF +D+  L ++ V  R+ AF
Sbjct: 638 DFVMDVVMLAVLIVGFRLVAF 658


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 90  WPPTPSTGPSCSATRPTVISSIPRPPSRTWT 182
           WPP P T   C+      +    +P  RT+T
Sbjct: 342 WPPAPQTDRLCN---KNFVIEASKPHERTFT 369


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 42  GSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRP 164
           GS T  TSAT       PP P T  + +A    + S + RP
Sbjct: 104 GSST--TSATSGAVMASPPMPITTDNVAAISGVLRSLLDRP 142


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 141 VISSIPRPPSRTWTWKTPI 197
           VISS P PP+ + T +T +
Sbjct: 155 VISSTPLPPTTSTTTRTTL 173


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 227 IFVLLRIFAFSSYAGNSSRLDKLNCTL 307
           IF+++ ++A SSY   +     +N T+
Sbjct: 33  IFIIIALYAHSSYGRENFIYGSMNMTV 59


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 63   SATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRT 176
            S+T    P W   PST  S + T P   ++  R  + T
Sbjct: 1026 SSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRRTTTT 1063


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 97   GGQRGALEPVADVGQVGDPAQVH 29
            GG++G+  P+A + ++ D  + H
Sbjct: 982  GGKKGSSHPLAALQKLCDKTETH 1004


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,558
Number of Sequences: 336
Number of extensions: 1918
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)