Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20146
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   8.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.6  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 252 WPRFTRNWC 278
           WP+F ++WC
Sbjct: 109 WPKFVKDWC 117


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 252 WPRFTRNWC 278
           WP+F ++WC
Sbjct: 109 WPKFVKDWC 117


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 263 HPELVLASYYNSDDAPHDPDGVCLVWNTKFKK 358
           +  +   SYY+ DD   D      +W   F K
Sbjct: 109 YSNVTTCSYYSLDDLSEDTFYDIRLWGVSFSK 140


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 299 HCCSKRPAPVPGETWPVQT 243
           H C      VPGET  +QT
Sbjct: 496 HSCKLTSKEVPGETINLQT 514


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 246 LDWPRFTRNW 275
           + WPRF ++W
Sbjct: 124 MKWPRFMKDW 133


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 246 LDWPRFTRNW 275
           + WPRF ++W
Sbjct: 124 MKWPRFMKDW 133


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 246 LDWPRFTRNW 275
           + WPRF ++W
Sbjct: 124 MKWPRFMKDW 133


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 235 HRPRDQRSSSKVRTRERRAADLSSRA 158
           H P+    + ++RT E+R    SS++
Sbjct: 26  HGPQSDSRNQQLRTGEKRKRSTSSQS 51


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 577 GRSGFLSPTGSTPGE 533
           G    LSP+G+TP +
Sbjct: 53  GHGSLLSPSGNTPNK 67


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 LSSVAHTHPVYCLSVIGSQNAHNL 585
           L+S  +T P  C  VIG+   H L
Sbjct: 75  LASGDYTVPAGCTVVIGTFKVHRL 98


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 339 GTPSSRRPLPKTYSTVSRRL*AP 407
           G P+S +PLP+ ++  S +L  P
Sbjct: 23  GYPASVQPLPRHFNPPSDKLHHP 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,220
Number of Sequences: 336
Number of extensions: 2989
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)