Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20139
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 GNGNHSPTGGPYARLPTRAIRKKSLDNTTTLTYSISRNLYRPS 318
           G+GN+ P GGP + + +  +  K  D   +    +S ++ + S
Sbjct: 530 GSGNNQPPGGPSSHV-SAVLTCKVCDQAFSSLKELSNHMVKNS 571


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 111 LKGLLVFSECLASGSHGTRRYFWRRV 34
           L  L V    +A G H   RY W +V
Sbjct: 136 LNTLTVVFMLIALGEHWLSRYSWAKV 161


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 111 LKGLLVFSECLASGSHGTRRYFWRRV 34
           L  L V    +A G H   RY W +V
Sbjct: 136 LNTLTVVFMLIALGEHWLSRYSWAKV 161


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 22  REKFHTPPKIP 54
           REK +TPP++P
Sbjct: 134 REKPYTPPRLP 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,119
Number of Sequences: 336
Number of extensions: 3871
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)