Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20130
         (414 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.39 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   2.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   3.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   4.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   4.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   4.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   4.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   4.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   4.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   4.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   4.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   4.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   8.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.39
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 255  TTPHFQFIN*LKTQTKPTVSTTRLSTISASAR*NYPH 365
            TT H+Q      T T+PT + ++L      +   YPH
Sbjct: 1179 TTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPH 1215


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 186 PDRIMNTYSVVPSPKVSDTVVEPTTPH 266
           PD+  +   ++P+P  S+    PT  H
Sbjct: 181 PDQYQSYQILLPTPTCSEASSSPTPSH 207


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 48  DSVLDVVRKEAESCDCLQGF 107
           D V    RK AE C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 44  SPNTQTHPSASCKYADSTSSTGVA 67


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 NPWRQSHDSASFRTTSKTESTSSA 35
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 81  PLPFERRLKLNRRAQHPP 28
           P P  R  K++RR   PP
Sbjct: 251 PTPKPRPTKVSRRKPRPP 268


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 12  AKGHYTEGAELVDSVLDVVRKEAESCDCLQG 104
           A+  Y  G+E   S++ +   +  +C C  G
Sbjct: 851 ARKPYVNGSEYHPSIVSLGEYKCVTCKCENG 881


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,463
Number of Sequences: 336
Number of extensions: 2094
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)