Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20121
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.3  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 613 EINHHYSADCYSRQKRLLIL 672
           E   H+S+  YS +KRL +L
Sbjct: 251 ERKKHFSSSSYSSRKRLAML 270


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 613 EINHHYSADCYSRQKRLLIL 672
           E   H+S+  YS +KRL +L
Sbjct: 251 ERKKHFSSSSYSSRKRLAML 270


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 386 TPVQTRILQNLSLKNN 433
           TPV    LQNL LK N
Sbjct: 161 TPVTHIFLQNLILKEN 176


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 546 TSRLNTIICIYYIY 587
           T  L  ++CIYY Y
Sbjct: 249 TVHLLLLVCIYYFY 262



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 TSRLNTIICIYYIYQA 593
           T  L  ++CIYY Y A
Sbjct: 276 TMHLLFLLCIYYFYCA 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,884
Number of Sequences: 336
Number of extensions: 3288
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)