Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20095
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 26 0.27
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 25 0.47
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 1.1
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 4.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 4.4
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 4.4
AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like prote... 22 4.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 4.4
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 22 4.4
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 5.8
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 7.6
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 361 TKFGRFSSATALFTKNIKNKYCNIVLYLKNNINKILMWHSGHD 233
T FG+ T L T NKYCN ++ ++ IL++++ D
Sbjct: 305 TYFGKTGRKTVLKT----NKYCNFIILFYLSVFVILVYYASLD 343
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 25.4 bits (53), Expect = 0.47
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 92 FELIMAKKGVVAFVKDFYYDP 154
F L+++K + + VKDF +DP
Sbjct: 442 FALLVSKVALASVVKDFVFDP 462
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 359 CSHIDRRSRCSFRWNGSDDECSTIYRERRHN 451
C + ++ R +W SD+ C+T + E +N
Sbjct: 673 CFYENKFYRQEAQWTSSDNPCTTCFCENGNN 703
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 524 HNHKTVNNSLHGGCYGENWKYH 589
HNH+ N+++ YG YH
Sbjct: 65 HNHQNYNSNVLSNGYGYGNYYH 86
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 524 HNHKTVNNSLHGGCYGENWKYH 589
HNH+ N+++ YG YH
Sbjct: 65 HNHQNYNSNVLSNGYGYGNYYH 86
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 301 YCNIVLYLKNNINKIL 254
+C I++YL + IN IL
Sbjct: 335 FCRIMVYLNSAINPIL 350
>AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like protein
protein.
Length = 160
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 411 MTNVQRFIGKEGITFTNSYVT 473
+++V +FI K G F SYVT
Sbjct: 80 VSSVLKFIRKYGSHFIESYVT 100
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 524 HNHKTVNNSLHGGCYGENWKYH 589
HNH+ N+++ YG YH
Sbjct: 65 HNHQNYNSNVLSNGYGYGNYYH 86
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 524 HNHKTVNNSLHGGCYGENWKYH 589
HNH+ N+++ YG YH
Sbjct: 65 HNHQNYNSNVLSNGYGYGNYYH 86
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 706 PGVPPLGHRLL*YHTDSNIPRIE 638
PG+ PLGH L H I + E
Sbjct: 261 PGLSPLGHTLSMNHKYEKIDKEE 283
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 122 VAFVKDFYYDPFKWSLVKSVGFFTVGVV 205
+AFV Y+ F W+ + FF + V
Sbjct: 405 LAFVTIVTYETFVWTQIMGAEFFKLYAV 432
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,950
Number of Sequences: 336
Number of extensions: 3956
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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