Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20070
(639 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 24 0.93
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 2.8
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 23 2.8
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 5.0
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 5.0
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 5.0
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 21 6.6
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 6.6
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 8.7
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 8.7
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 8.7
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 24.2 bits (50), Expect = 0.93
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = -2
Query: 296 CCIDSYCSS*FRCYQFCYTQY*STPEQPVQ*HLRRFFYCFSFTNNRYVVWFQMSVKIIFY 117
C + + ++ F TQY PE+ V + F CFS + F + +IF+
Sbjct: 191 CLLAWFIAALFTSPILAITQY--GPEEYVDGSI--VFVCFSLVEDTLPCVFFLGSILIFF 246
Query: 116 LNPMCMLPI*VGIIDYTL 63
+ P+ +L I +I TL
Sbjct: 247 IFPLAILIIVYILIAKTL 264
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 343 GSFH*IQV*CRSTYGTCWPECC*CHCQGL 429
G + + C + TCW EC C+ L
Sbjct: 869 GEYKCVTCKCENGKPTCWRECDKATCEKL 897
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 216 LFGSALILRVAKLITSEL 269
+FG LIL +AK ITS L
Sbjct: 223 IFGWTLILILAKCITSSL 240
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 60 WYDMYYYVLFFNLHIY 13
WY+ YYY N +Y
Sbjct: 37 WYNPYYYQYLQNAALY 52
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 433 WEDLGNGTSNTQASKFHKLID 371
WE L T ++ SK +L+D
Sbjct: 105 WESLIEVTKTSETSKLQQLVD 125
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.8 bits (44), Expect = 5.0
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 259 VISFATRNIRALPNNLY 209
++ F+ +R+LP+NL+
Sbjct: 324 IVDFSHNRLRSLPDNLF 340
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 134 LTFGTKLRIYY**KKNSKRIFLNVIVQVVRECS 232
+T G + ++Y K +K I + +VQ+ + +
Sbjct: 42 ITLGVAVSVFYRAKDYAKFIHIKAVVQITLDAT 74
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 134 LTFGTKLRIYY**KKNSKRIFLNVIVQVVRECS 232
+T G + ++Y K +K I + +VQ+ + +
Sbjct: 42 ITLGVAVSVFYRAKDYAKFIHIKAVVQITLDAT 74
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory
receptor candidate 56 protein.
Length = 358
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 72 LYT*WYDMYYYVLFFNLHIYKLV 4
+YT + ++Y FF L Y LV
Sbjct: 16 VYTAIHPLFYVCTFFGLAPYSLV 38
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 48 YYYVLFFNLHI 16
YYY FF +H+
Sbjct: 115 YYYYAFFGVHL 125
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory
receptor candidate 21 protein.
Length = 386
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 72 LYT*WYDMYYYVLFFNLHIYKLV 4
+YT + ++Y FF L Y LV
Sbjct: 16 VYTAIHPLFYVCTFFGLAPYSLV 38
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,102
Number of Sequences: 336
Number of extensions: 3420
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -