Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00054
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.31 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   0.41 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = -3

Query: 292 SLTSQQPITQYTAFYKDL*NSELVFCIGNLWLSAVCRLVVFQGFGYTLLKQL*ILHDHAQ 113
           S  SQ  + Q+ AF   L   +  FC+ N ++  VC+L    G     L Q+ I+H+   
Sbjct: 174 SKMSQVMLIQFCAFVVVL---KQKFCVVNQYIKQVCKL--NNGHYKNFLSQVEIIHNEIL 228

Query: 112 LFSNNV 95
           +  N +
Sbjct: 229 VTHNEI 234


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = -3

Query: 283 SQQPITQYTAFYKDL*NSELVFCIGNLWLSAVCRLVVFQGFGYTLLKQL*ILHDHAQLFS 104
           SQ  + Q+ AF   L   +  FC+ N ++  VC+L    G     L Q+ I+H+   +  
Sbjct: 2   SQVMLIQFCAFVVVL---KQKFCVVNQYIKQVCKL--NNGHYKNFLSQVEIIHNEILVTH 56

Query: 103 NNV 95
           N +
Sbjct: 57  NEI 59


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 20/91 (21%), Positives = 38/91 (41%)
 Frame = +3

Query: 270 IGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANETESFSYSDLQKLILEEYGETHYHAY 449
           IG   +     E+ + +  Y W  + F   + +   +++        +L  YGE  +   
Sbjct: 381 IGLASLGASDAEIEKLSTVY-WFTVEFGLCKESGVVKAYGAG-----LLSAYGELLHALS 434

Query: 450 EKPVVYFQVLALTGQFEPAMNSSREYQDIKY 542
           +KP +          FEPA+ + + YQD +Y
Sbjct: 435 DKPELR--------PFEPAVTAVQPYQDQEY 457


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 589 HTEECSSSTPVCGHRRSTT 645
           H   CSSS PV     STT
Sbjct: 232 HRSWCSSSQPVLSTTNSTT 250


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 344 LLHKDAQCQRNGIVLLFR 397
           L+H D +CQ N  V+ ++
Sbjct: 110 LIHFDTKCQENSTVIDYK 127


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 344 LLHKDAQCQRNGIVLLFR 397
           L+H D +CQ N  V+ ++
Sbjct: 128 LIHFDTKCQENSTVIDYK 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,805
Number of Sequences: 336
Number of extensions: 3293
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)