Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00042
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.1  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 688 GYSTKGVSHGWSLWFL*NIMVSGV 617
           G+S KG S  W L F   + +SGV
Sbjct: 27  GFSPKGYSLLWILLFTLGVTISGV 50


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 610 RFLHQRPLCFKGTTN 654
           R LHQ P+C K  TN
Sbjct: 192 RVLHQCPVCHKKFTN 206


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 335 IFSIHSKYSKCSYNYITTTQFRIC 406
           IF++H  +  C Y ++    F +C
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLLC 145


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +3

Query: 249 FQQQGKNIPRPSYGDMHIPAVVLGRLLKRSSPSIQNIQN 365
           FQ+    +PR +   ++ P + +  +  +S  S +N  N
Sbjct: 410 FQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFN 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,576
Number of Sequences: 336
Number of extensions: 4225
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)