Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0278.Seq
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    43   3e-06
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.86 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.86 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.86 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.86 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   2.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.0  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   8.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
 Frame = +1

Query: 256 TGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 408
           +GKTA F + I+  +         + +  +   +I++PTRELA QI         +   K
Sbjct: 206 SGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVK 265

Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
                GGT+      ++  G H++V TPGR+ D
Sbjct: 266 VAVIYGGTSTNHQRGRILGGCHILVATPGRLKD 298



 Score = 38.3 bits (85), Expect = 7e-05
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = +2

Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
           + +F+   L+  LL  +   G+ KP+AIQ+ AI   + GRD+++ AQ+
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 611
           + R  +  N++K FVLDEAD ML  GF   + ++
Sbjct: 300 VNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEM 333


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 282  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 386
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 282  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 386
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 282  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 386
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 282  IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 386
            ID + +  +   MS+   G H   G    EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 459 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 316
           Q+AN  TD  +   S+A S  +++   H L +    +  G+Q    +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 423 WWHQCP*RYSPTGXW 467
           WW++   +Y PTG +
Sbjct: 98  WWNELEAKYDPTGIY 112


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 333 PGSHKRAGPTNSEGGDSSW 389
           PG+ K+ GP +     +SW
Sbjct: 28  PGAKKKVGPIDQSAAAASW 46


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 333 PGSHKRAGPTNSEGGDSSW 389
           PG+ K+ GP +     +SW
Sbjct: 28  PGAKKKVGPIDQSAAAASW 46


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 423 WWHQCP*RYSPTGXW 467
           WW++   +Y PTG +
Sbjct: 98  WWNELEAKYDPTGIY 112


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 367 QKVVIALGDHLNAKCHAC 420
           +K  IAL D  N  CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 71  FPEVHRNYLDPSMAHFW 21
           F +V R+Y DP   ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 142 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 32
           FF+ ++I G +N + + V    + +  + +T  +L W
Sbjct: 43  FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,135
Number of Sequences: 336
Number of extensions: 4290
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)