Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0222.Seq
         (819 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   6.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   6.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   6.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   6.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 6   ANLARFVARINQKNFRHVTDEYNKQNAKKQSTG---SQSDREAANFP 137
           A LA  ++R N    R   D           TG   SQ+DR+  N+P
Sbjct: 93  AALADMISRCNAVGVRIYVDTVINHMTGMGGTGTAGSQADRDGKNYP 139


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 6   ANLARFVARINQKNFRHVTDEYNKQNAKKQSTG---SQSDREAANFP 137
           A LA  ++R N    R   D           TG   SQ+DR+  N+P
Sbjct: 94  AALADMISRCNAVGVRIYVDTVINHMTGMGGTGTAGSQADRDGKNYP 140


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 96  STGSQSDREAANFP 137
           + GSQ+DR+  N+P
Sbjct: 127 TAGSQADRDGKNYP 140


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 16  QDLWPGSIRKILDTSQM---NIINRMQRNSPQARSLIEKPQTFPT 141
           Q ++P +   I +TS     N +++   +SP  R+L+ +PQ   T
Sbjct: 94  QGIYPENKTLINETSLQLDENKLDKKNDDSPALRALLTRPQAKKT 138


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 61  QMNIINRMQRNSPQARSLIEKPQTFPTRLEIKS*QP 168
           Q N +  + ++SPQ   ++    T PT+  I+S +P
Sbjct: 14  QQNKMYNVIQHSPQQSIIVSGSITQPTKTVIQSKRP 49


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 16  QDLWPGSIRKILDTSQM---NIINRMQRNSPQARSLIEKPQTFPT 141
           Q ++P +   I +TS     N +++   +SP  R+L+ +PQ   T
Sbjct: 94  QGIYPENKTLINETSLQLDENKLDKKNDDSPALRALLTRPQAKKT 138


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 16  QDLWPGSIRKILDTSQM---NIINRMQRNSPQARSLIEKPQTFPT 141
           Q ++P +   I +TS     N +++   +SP  R+L+ +PQ   T
Sbjct: 94  QGIYPENKTLINETSLQLDENKLDKKDDDSPALRALLTRPQAKKT 138


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 287 SCPLLHSQTFHVISRVLKV 231
           S P+L++  F+V++ VL V
Sbjct: 85  SIPMLYAYVFYVVTTVLVV 103


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 287 SCPLLHSQTFHVISRVLKV 231
           S P+L++  F+V++ VL V
Sbjct: 85  SIPMLYAYVFYVVTTVLVV 103


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 287 SCPLLHSQTFHVISRVLKV 231
           S P+L++  F+V++ VL V
Sbjct: 85  SIPMLYAYVFYVVTTVLVV 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,249
Number of Sequences: 336
Number of extensions: 3623
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)