Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30203.Seq
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.7  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 101 GPPKGIPALKAHIIANKIDVALWGVRV 181
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = +1

Query: 322 SRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASY-SLTILDT----- 483
           SR F    F  D + +   SL F   + ++   VP+ L+ +   A+Y S  I  T     
Sbjct: 297 SRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIII 356

Query: 484 LGQNSLWVV 510
           LG N ++VV
Sbjct: 357 LGLNVVYVV 365


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 358 SAHYLFYSLIFMNVVPNLLILVPIFLFALLH 450
           + + LFY  +  +V  NL   VP+ + AL H
Sbjct: 170 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 200


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = +1

Query: 322 SRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASY-SLTILDT----- 483
           SR F    F  D + +   SL F   + ++   VP+ L+ +   A+Y S  I  T     
Sbjct: 22  SRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIII 81

Query: 484 LGQNSLWVV 510
           LG N ++VV
Sbjct: 82  LGLNVVYVV 90


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 358 SAHYLFYSLIFMNVVPNLLILVPIFLFALLH 450
           + + LFY  +  +V  NL   VP+ + AL H
Sbjct: 126 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 156


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 151 NRRSSLGGPRNHRAVYHWIRV 213
           N R    GPR   AVY  +R+
Sbjct: 179 NIRLKRAGPRTESAVYEPVRI 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,923
Number of Sequences: 336
Number of extensions: 3794
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)