Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30141.Seq
         (897 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   3.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.9  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 678 SVSQSDTDVQRPSSRWPLRTSPSWPRYWT 592
           +VS S + +  PS+   L T+P+ P ++T
Sbjct: 124 TVSSSTSSIPSPSTTDDLSTNPTPPPHYT 152


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 10  CFYIY*FFGKLNKFVIVLVVKCSVCI 87
           C+Y Y FFG    + +V++   S+C+
Sbjct: 114 CYYYYAFFGVHLAYGVVIIY--SICV 137


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 205 HPLWYVSWSARNS 167
           +PL Y SW++R S
Sbjct: 144 YPLTYCSWTSRRS 156


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 461 NSYSRRGVQRQGPIRGLVREVAAPDV 538
           N Y   G  R G I G    VA P+V
Sbjct: 92  NRYQETGSIRPGVIGGSKPRVATPEV 117


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 193 TIVGGWAWAWCLVTDVQRIS 252
           T+VGG  +A+CL+  ++ ++
Sbjct: 80  TLVGGPEYAYCLLPPLESLA 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,950
Number of Sequences: 336
Number of extensions: 5186
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)