Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D06f
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   9.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    20   9.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   9.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   9.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 125 HTAHLMVSGYRRPWTLAMPGAEPS 196
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 161 GDGNHSPSGGP 129
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 390 RPNMSSSNRSXETPPS 437
           +P M +S+R    PPS
Sbjct: 226 KPEMKTSDRGVPLPPS 241


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 155 GNHSPSGGPYARLP 114
           G   P G PY R P
Sbjct: 71  GGQPPQGMPYPRFP 84


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -2

Query: 298 KFVKSWC 278
           KFVK WC
Sbjct: 111 KFVKDWC 117


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -2

Query: 298 KFVKSWC 278
           KFVK WC
Sbjct: 111 KFVKDWC 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,961
Number of Sequences: 336
Number of extensions: 1539
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)