Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D01f
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   2.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   2.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   3.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   3.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   3.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.6  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 208 TTHXYHTRRESTHLQNV 158
           TTH Y T+ ++  L+NV
Sbjct: 22  TTHKYTTKYDNIDLENV 38


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 1   HGFGGYFDCTLYGNEIDQHCSWYTY 75
           HGF   F C + G E     S++ +
Sbjct: 493 HGFHNPFTCNMCGVECSDKVSFFLH 517


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 46  FHYHKGYNQNTLQS 5
           +H H+ YN N L +
Sbjct: 64  YHNHQNYNSNVLSN 77


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 46  FHYHKGYNQNTLQS 5
           +H H+ YN N L +
Sbjct: 64  YHNHQNYNSNVLSN 77


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 46  FHYHKGYNQNTLQS 5
           +H H+ YN N L +
Sbjct: 64  YHNHQNYNSNVLSN 77


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 46  FHYHKGYNQNTLQS 5
           +H H+ YN N L +
Sbjct: 64  YHNHQNYNSNVLSN 77


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 276 FKATFPNYDR*HCAV 232
           FKAT P Y   HC +
Sbjct: 592 FKATNPGYWLFHCHI 606


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +3

Query: 165 WRCVDSRRVWYXWVVEV 215
           ++C + RR++Y + V +
Sbjct: 48  FKCYNLRRIYYFYCVSI 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,994
Number of Sequences: 336
Number of extensions: 2022
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)