Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0075
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.27 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 344 YDDTRPNLVQPNDISL 391
           YDD R  L+ PND+S+
Sbjct: 187 YDDLRDQLLMPNDVSI 202


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 40  FPKKSSPTSLKISTKM*IPQISVLYLVGRR 129
           +P K     L I TKM + Q+S  +   RR
Sbjct: 111 YPTKGEKIMLAIITKMTLTQVSTWFANARR 140


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 456 LMPSGTTTDSPCMPAVMVS 512
           L+P GT    PC   VM+S
Sbjct: 586 LLPKGTEAGYPCHLFVMIS 604


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 246 VAGASRWSFAPALRT*PLRNTFRNRQ 323
           VAGAS  +FAP +     R  +   Q
Sbjct: 219 VAGASNGTFAPGMEPKRQRTAYTRHQ 244


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 246 VAGASRWSFAPALRT*PLRNTFRNRQ 323
           VAGAS  +FAP +     R  +   Q
Sbjct: 219 VAGASNGTFAPGMEPKRQRTAYTRHQ 244


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 250 PEHHGGHSRRRYELDHSGIHFGIDRMVQL 336
           P H  GHS R   ++  G H  +  ++++
Sbjct: 533 PFHLHGHSFRVVAMERVGSHVNVSEILKM 561


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 246 VAGASRWSFAPALRT*PLRNTFRNRQ 323
           VAGAS  +FAP +     R  +   Q
Sbjct: 219 VAGASNGTFAPGMEPKRQRTAYTRHQ 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,176
Number of Sequences: 336
Number of extensions: 4359
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)