Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0060
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.7  
U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           21   7.5  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 551 ETDCSIPCYVHSNRSKDLAGRNVESCFSLTVKQSKPAVLNVLGSVRFDLAF 703
           ET  + P Y  S+ S+     NVE   +L VK   P    V+G   +   F
Sbjct: 288 ETGHNAPLYSPSSDSQYQKQLNVEHAANLWVKLGTPKEKLVIGMPTYGRTF 338


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 596 KDLAGRNVESCFSLTVKQSK 655
           + L  +N E CFSL +K  K
Sbjct: 515 RTLGNQNSEMCFSLKLKNKK 534


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 596 KDLAGRNVESCFSLTVKQS 652
           +DLA RNV  C + TVK S
Sbjct: 616 RDLAARNVLVCENHTVKVS 634


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 385 RRSYIKARPRFGLATVDL 438
           + SY+KA+   G+A VDL
Sbjct: 398 KASYVKAKGLGGIAIVDL 415


>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 538 QQSLPTKDKDHLHRYFETL 482
           +Q +P+ D DH    FETL
Sbjct: 21  RQVIPSLDADHKLSKFETL 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,175
Number of Sequences: 336
Number of extensions: 3504
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)