Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30129
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    32   0.004
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       26   0.20 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 31.9 bits (69), Expect = 0.004
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +2

Query: 329 IKDVVLNSNAVDINSSIKSS-NIQECNTYDRGDIQASESCQCENGGSC--STESTNCICP 499
           +K +  N    DI +S +   +     +Y + +I   +S  C+NGG+C     S +C CP
Sbjct: 152 LKKLCNNGTCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCP 211

Query: 500 PGYR 511
            G++
Sbjct: 212 KGFQ 215



 Score = 29.1 bits (62), Expect = 0.028
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
 Frame = +2

Query: 302 RRQGGFSGCIKDVVLNSNAVD----INSSIKSSNIQECNTYDRGDIQASESCQCENGGSC 469
           R +G  + C+ +   N+  +D    +N    +  +     +    +    +  C+NGG C
Sbjct: 294 RCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHCESKVNFCATSPCQNGGVC 353

Query: 470 ST--ESTNCICPPGY 508
           +T      C CP G+
Sbjct: 354 TTIHAGHKCTCPEGF 368



 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 481 HQLHMPTRLPGSYCETRI 534
           H+ H      GSYC+T I
Sbjct: 168 HRCHCSDGYSGSYCQTEI 185


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +2

Query: 449 CENGGSC--STESTNCICPPGY 508
           CENGG+C     +  CIC  G+
Sbjct: 77  CENGGTCVDKINAFQCICKEGW 98



 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +2

Query: 449 CENGGSCST--ESTNCICPPGYRDRT 520
           C+NGG+C    ++  C CPP +   T
Sbjct: 153 CKNGGTCQDLGKTFMCRCPPDWEGTT 178


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 138 DRHSDRPPRGFRLHED 185
           D H DRPPR F    D
Sbjct: 252 DDHRDRPPRHFHEEHD 267


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +3

Query: 375 RLSRRTFKSATRMTAAIFRRRSPANAKTXVPVRLNPPTAYAHPAT 509
           +L ++  KSA+R T +  + ++   +    P  +  PT    P+T
Sbjct: 185 QLQQQQNKSASRTTTSPTKVKASKASPAAAPRSVATPTGIPTPST 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,741
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)