Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30128
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   0.69 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.8  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 593 TAVRRCSYRFSASKRWQPRDTRSARWQH 510
           T    C ++FS+S  W P     A+  H
Sbjct: 72  TLAHHCRFKFSSSVGWSPAGHEEAQSPH 99


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -1

Query: 496 VDLGMSICPLAWVIVSMISIF 434
           V + M +CP+ W++  ++ I+
Sbjct: 284 VTVPMIVCPIVWLMDEVVEIY 304


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -1

Query: 496 VDLGMSICPLAWVIVSMISIF 434
           V + M +CP+ W++  ++ I+
Sbjct: 284 VTVPMIVCPIVWLMDEVVEIY 304


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 133 HPQRGKIFWTDWNRSNPKIEWANMDGTER 219
           H Q G    T W +S  +  W    G ER
Sbjct: 272 HSQFGNGLETSWGKSRDESSWFYNSGWER 300


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 306 GLQVIKCIDLHSRQIETIAENCRYPFGLAI 395
           GLQ IK +DL    I ++A+    P  L++
Sbjct: 221 GLQNIKVLDLSFNNITSVAKQFFRPVELSL 250


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 214 PCRPCSPTRS*DCFDSS 164
           PC  C P +S  CF  S
Sbjct: 44  PCVSCGPGQSGQCFGPS 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,882
Number of Sequences: 336
Number of extensions: 3292
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)