Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30097
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.87 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   3.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   3.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   3.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   3.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   8.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           20   8.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 0.87
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 GNGNHSPSGGPCTSLPA 380
           G+GN+ P GGP + + A
Sbjct: 530 GSGNNQPPGGPSSHVSA 546


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 366 YTAHLMVSGYRCPWTSAMPGAEPS 295
           YT H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 227 EFI*NENISYPNVFYPFRNHINY 159
           +F  N +I    + Y + NH NY
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQNY 70


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 227 EFI*NENISYPNVFYPFRNHINY 159
           +F  N +I    + Y + NH NY
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQNY 70


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 227 EFI*NENISYPNVFYPFRNHINY 159
           +F  N +I    + Y + NH NY
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQNY 70


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 227 EFI*NENISYPNVFYPFRNHINY 159
           +F  N +I    + Y + NH NY
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQNY 70


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -1

Query: 331 PMDFSNARGR--AKPLPTAKILDSPVLI 254
           P D S  RGR  AKP+  A+   +P L+
Sbjct: 507 PNDTSLVRGRLVAKPVADARDAPAPFLL 534


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 230 VEFI*NENISYPNVFYPFRNH 168
           VE +  + +  PN+ +PF  H
Sbjct: 580 VEIVLVDEVQQPNLSHPFHLH 600


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 345 SGYRCPWTSAMPGAEPSRCLPQRF 274
           +G+R P+ SA+P +  S  LP  F
Sbjct: 200 AGFRSPYPSALPISTSS--LPSDF 221


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 345 SGYRCPWTSAMPGAEPSRCLPQRF 274
           +G+R P+ SA+P +  S  LP  F
Sbjct: 92  AGFRSPYPSALPISTSS--LPSDF 113


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 203 SYPNVFYPFRNHINYRP 153
           SY N  Y   N  NY P
Sbjct: 218 SYTNTIYHQENFENYEP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,293
Number of Sequences: 336
Number of extensions: 1932
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)