Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30094
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.54 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   3.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 486 TDVALRLVRDAATVHRVVQDLVRFDVTEFRNQH 388
           T + L L     ++++ +QD +R +VTE  N++
Sbjct: 303 TSITLALTCYELSLNKTIQDRLRHEVTEIYNEN 335


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 417 NERDPGRHGERSPRLAQVSEQRLCSLRIRPEEIDDQIKDKH--NDDEIKKAVHGI-CKHM 587
           N +D    GE  PR   + E     + I  + +D+    KH  N   +K A+  + C+  
Sbjct: 23  NAQDAPAGGENEPRKQDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIK 82

Query: 588 PKSV 599
            K+V
Sbjct: 83  EKTV 86


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 411 VTEFRNQHVFGQKRLLPVVVPVASQCRFAWNLSMDEWVSLRGS 283
           VT F N+ +  +K+ + V +P A +  + W L    WV   GS
Sbjct: 105 VTVFCNRDLGREKQFI-VKLPSAERVAWMWCLIFAFWVPQLGS 146


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 411 VTEFRNQHVFGQKRLLPVVVPVASQCRFAWNLSMDEWVSLRGS 283
           VT F N+ +  +K+ + V +P A +  + W L    WV   GS
Sbjct: 105 VTVFCNRDLGREKQFI-VKLPSAERVAWMWCLIFAFWVPQLGS 146


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 411 VTEFRNQHVFGQKRLLPVVVPVASQCRFAWNLSMDEWVSLRGS 283
           VT F N+ +  +K+ + V +P A +  + W L    WV   GS
Sbjct: 105 VTVFCNRDLGREKQFI-VKLPSAERVAWMWCLIFAFWVPQLGS 146


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 411 VTEFRNQHVFGQKRLLPVVVPVASQCRFAWNLSMDEWVSLRGS 283
           VT F N+ +  +K+ + V +P A +  + W L    WV   GS
Sbjct: 105 VTVFCNRDLGREKQFI-VKLPSAERVAWMWCLIFAFWVPQLGS 146


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 308 SIDKFHAXRH*EATGTTTGRSRFCPNTCWFLN 403
           SID++ A RH      +  R+R+     WF +
Sbjct: 119 SIDRYDAIRHPMKFSGSWKRARYLILAAWFFS 150


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 129 LDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVA 227
           L  +C  L   L SEC+D  ++    LV +LVA
Sbjct: 191 LKSVCADLC--LLSECVDLFNSLFGFLVLLLVA 221


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 426 DPGRHGERSPRLAQVSEQR 482
           DPGR    SPR++  S  +
Sbjct: 61  DPGRKSPSSPRISSPSSTK 79


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 4   QKKSAESTSILKNLTAP 54
           Q++S E +S LKN +AP
Sbjct: 133 QQQSVEKSSKLKNKSAP 149


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 47  LPPVPLRR*TTRIGAQEQP**GEHSQ 124
           LPP P R   T +  Q +P   +H Q
Sbjct: 485 LPPYPNRTQITEVTQQTEPSIYQHDQ 510


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 507 EEIDDQIKDKHNDDE 551
           EE++ ++ D+ +DDE
Sbjct: 26  EEVEHRLSDRDDDDE 40


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 143 HAALPETAERVHRLRGHVLESARRDAGGR 229
           HA  P  A  V+    HV+  A  D G R
Sbjct: 47  HAMHPYHANHVNPTANHVMGGAVPDVGKR 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,235
Number of Sequences: 336
Number of extensions: 2620
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)