Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C11
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.72 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.72 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.9  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 575 HYLQVYYPYHFHPYHQ 528
           H++Q  +P H  P+HQ
Sbjct: 169 HHMQEQHPQHHQPHHQ 184


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 575 HYLQVYYPYHFHPYHQ 528
           H++Q  +P H  P+HQ
Sbjct: 171 HHMQEQHPQHHQPHHQ 186


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -2

Query: 578 FHYLQVYYPYHFHPYHQLCSELFFQFVMNFLSAEYFLQ*IFLWNRK*VHSKV 423
           FHY+  Y PY+      LC   F    +N +++E        +++K  +SK+
Sbjct: 187 FHYIFTYMPYNI--VFGLCLTTFGLLPVNGVTSEKCNLTFSWYSKKVFYSKI 236


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 203 FRCRMCTVKCLEILHDIQHL 144
           F C MC V+C + +    H+
Sbjct: 499 FTCNMCGVECSDKVSFFLHI 518


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 58  SSTFHPISNWHLQNSA 11
           S++  P S W L NSA
Sbjct: 359 STSLRPFSRWSLCNSA 374


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 403 DVKTTSQTLECTYFRFHRKI 462
           D K  +  ++  Y R HRKI
Sbjct: 389 DSKLQTMNIKVNYHRVHRKI 408


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 403 DVKTTSQTLECTYFRFHRKI 462
           D K  +  ++  Y R HRKI
Sbjct: 114 DSKLQTMNIKVNYHRVHRKI 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,067
Number of Sequences: 336
Number of extensions: 2495
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)