Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G21
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    28   0.048
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    28   0.048
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 0.048
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 462 PKKKQWSFSINKCIYRAWPXPPATLFLA 545
           P+   W  ++ KC+Y+ W  P  + FL+
Sbjct: 132 PEVGTWIRAVRKCLYKLWKMPSLSEFLS 159


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 0.048
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 462 PKKKQWSFSINKCIYRAWPXPPATLFLA 545
           P+   W  ++ KC+Y+ W  P  + FL+
Sbjct: 132 PEVGTWIRAVRKCLYKLWKMPSLSEFLS 159


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 294 RDSSISRHYNTRRCKRRVRFLP 359
           R S +  + +  RCKR+++F+P
Sbjct: 56  RTSVLVTNNSDLRCKRKIQFMP 77


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 344 GQIPANIVADTPQAA 388
           G+IP NI+   PQ A
Sbjct: 45  GEIPQNIIQQQPQQA 59


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 449  PFGVTEEETMEFFNQQMHLS 508
            PFGV    T +   Q++H+S
Sbjct: 1298 PFGVKTNITYDESTQEVHIS 1317


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 449  PFGVTEEETMEFFNQQMHLS 508
            PFGV    T +   Q++H+S
Sbjct: 1298 PFGVKTNITYDESTQEVHIS 1317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,697
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)