Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0043
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.26 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.6  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.4 bits (53), Expect = 0.26
 Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = -3

Query: 363 LASRASLV-ATMKLFVCSLRMRDASSILAIF*AMAAIY*LPSYVSSL 226
           LA++ +L  +T+K++  + RM+D    +AI    AA+Y  P++ +S+
Sbjct: 104 LAAQLNLPESTIKVWFQNRRMKDKRQRMAIAWPYAAVYTDPAFAASI 150


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +2

Query: 335 VATKEALDAKMETHEEKREAYINELRSRLK 424
           +  +  +D K E H+E+  A + E+R+  +
Sbjct: 172 IVGESVIDEKAEEHKEQFTALVREIRNAFR 201


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 52  AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSP 177
           A    T  T+++  + S       V  A P G+P P  + SP
Sbjct: 194 ASRTTTSPTKVKASKASPAAAPRSV--ATPTGIPTPSTSASP 233



 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 179 SGESARRGTGTPTGSASITSYARPP 105
           S  +A R   TPTG  + ++ A PP
Sbjct: 210 SPAAAPRSVATPTGIPTPSTSASPP 234


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = -1

Query: 200 SSTEGVFSGESARRGTGTPTGSASITSYARPPFDISWQRISVDLVSTS 57
           SS  G     S +  T TPT   S   Y    F + W   ++ ++  S
Sbjct: 18  SSLAGFEVNSSEQLTTPTPTDINSFYFYKTEQFTVLWVLFTMIVLGNS 65


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 335 VATKEALDAKMETHEEKREAYINELRSRLK 424
           VA  + LD     H E+  + + ELR   K
Sbjct: 180 VAGDKVLDENAAEHREQFVSLVRELRGAFK 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,827
Number of Sequences: 336
Number of extensions: 1435
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)