Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0083
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.64 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   6.0  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   6.0  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   6.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = -2

Query: 622 FIGIVFLSLRTLPNSITDCILWTALSILVS--TSSILGSGSC-*NVHYQAN--LQAVIFV 458
           ++G ++  L T+   + D   WT + IL    TSS+    +C     + AN  +  ++F 
Sbjct: 205 YVGTLYRILTTMMEMVNDIFGWTLILILAKCITSSLSSLYTCIAGYEFNANFTISYILFA 264

Query: 457 KFYT 446
            F T
Sbjct: 265 LFNT 268


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 175 KCYG*MDNLIYPVFDTICEE 234
           +C G  D  I+   D+ICE+
Sbjct: 52  QCKGVYDKSIFAKLDSICED 71


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 175 KCYG*MDNLIYPVFDTICEE 234
           +C G  D  I+   D+ICE+
Sbjct: 52  QCKGVYDKSIFAKLDSICED 71


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 175 KCYG*MDNLIYPVFDTICEE 234
           +C G  D  I+   D+ICE+
Sbjct: 52  QCKGVYDKSIFAKLDSICED 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,365
Number of Sequences: 336
Number of extensions: 3753
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)