Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0100
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 525 DHYQTTHLSVVGDLLFPSFLKVAR 454
           DH    H SV G L F + L V R
Sbjct: 311 DHLAVKHFSVEGQLEFRALLFVPR 334


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 581 CVQLWTCW 604
           C + WTCW
Sbjct: 112 CTRYWTCW 119


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 307 DRSIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHE 429
           D ++A+  +  G +L       KN      + L++W NEH+
Sbjct: 70  DPALAAYGYGAGYDL---AARRKNATRESTATLKAWLNEHK 107


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 202 IWTAGSDP 225
           IWT GSDP
Sbjct: 445 IWTTGSDP 452


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 370 NKNHKINPDSALESWFNEHENYKFAPL 450
           N +H+I      +S FN HE  K   L
Sbjct: 104 NPHHEIKLQHLHQSKFNPHEEVKLQHL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,764
Number of Sequences: 336
Number of extensions: 4266
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)